RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 ZNF724A8MTY0 619 aa11.83□□□□□ -0.52
COPS7B-221ENST00000488111 AHRRA9YTQ3 701 aa11.83□□□□□ -0.52
COPS7B-221ENST00000488111 DHHO43323 396 aa11.83□□□□□ -0.52
COPS7B-221ENST00000488111 CHATP28329 748 aa11.83□□□□□ -0.52
COPS7B-221ENST00000488111 RSU1Q15404 277 aa11.83□□□□□ -0.52
COPS7B-221ENST00000488111 SURF2Q15527 256 aaPredicted RBP11.83□□□□□ -0.52
COPS7B-221ENST00000488111 C9orf135Q5VTT2 229 aa11.83□□□□□ -0.52
COPS7B-221ENST00000488111 SPNS3Q6ZMD2 512 aa11.83□□□□□ -0.52
COPS7B-221ENST00000488111 HIST3H2BBQ8N257 126 aa11.83□□□□□ -0.52
COPS7B-221ENST00000488111 RPRMLQ8N4K4 120 aa11.83□□□□□ -0.52
COPS7B-221ENST00000488111 RBM14Q96PK6 669 aaKnown RBP11.83□□□□□ -0.52
COPS7B-221ENST00000488111 SSX3Q99909 188 aa11.83□□□□□ -0.52
COPS7B-221ENST00000488111 SLC7A10Q9NS82 523 aa11.83□□□□□ -0.52
COPS7B-221ENST00000488111 C19orf12Q9NSK7 152 aa11.83□□□□□ -0.52
COPS7B-221ENST00000488111 ZDHHC8Q9ULC8 765 aa11.83□□□□□ -0.52
COPS7B-221ENST00000488111 A0A087X0M5 115 aa11.82□□□□□ -0.52
COPS7B-221ENST00000488111 A0A1B0GX30 115 aa11.82□□□□□ -0.52
COPS7B-221ENST00000488111 BTBD17A6NE02 478 aa11.82□□□□□ -0.52
COPS7B-221ENST00000488111 TMEM14DPA8MWL7 114 aa11.82□□□□□ -0.52
COPS7B-221ENST00000488111 DEDDO75618 318 aa11.82□□□□□ -0.52
COPS7B-221ENST00000488111 FCGR2AP12318 317 aa11.82□□□□□ -0.52
COPS7B-221ENST00000488111 PI3P19957 117 aa11.82□□□□□ -0.52
COPS7B-221ENST00000488111 RAB4BP61018 213 aa11.82□□□□□ -0.52
COPS7B-221ENST00000488111 LSM6P62312 80 aaKnown RBP11.82□□□□□ -0.52
COPS7B-221ENST00000488111 ZNF616Q08AN1 781 aa11.82□□□□□ -0.52
COPS7B-221ENST00000488111 KLRB1Q12918 225 aa11.82□□□□□ -0.52
COPS7B-221ENST00000488111 LRRC18Q8N456 261 aa11.82□□□□□ -0.52
COPS7B-221ENST00000488111 CCDC54Q8NEL0 328 aa11.82□□□□□ -0.52
COPS7B-221ENST00000488111 OR52N5Q8NH56 324 aa11.82□□□□□ -0.52
COPS7B-221ENST00000488111 NEU1Q99519 415 aa11.82□□□□□ -0.52
COPS7B-221ENST00000488111 PBDC1Q9BVG4 233 aa11.82□□□□□ -0.52
COPS7B-221ENST00000488111 OSGIN2Q9Y236 505 aa11.82□□□□□ -0.52
COPS7B-221ENST00000488111 EMC9Q9Y3B6 208 aa11.82□□□□□ -0.52
COPS7B-221ENST00000488111 TPRP12270 2363 aaKnown RBP11.82□□□□□ -0.52
COPS7B-221ENST00000488111 TLN1Q9Y490 2541 aaKnown RBP11.82□□□□□ -0.52
COPS7B-221ENST00000488111 PHF3Q92576 2039 aaKnown RBP11.82□□□□□ -0.52
COPS7B-221ENST00000488111 TSTD3H0UI37 97 aa11.82□□□□□ -0.52
COPS7B-221ENST00000488111 GSTP1P09211 210 aaKnown RBP11.82□□□□□ -0.52
COPS7B-221ENST00000488111 CAMLGP49069 296 aa11.82□□□□□ -0.52
COPS7B-221ENST00000488111 FOXG1P55316 489 aaPredicted RBP11.82□□□□□ -0.52
COPS7B-221ENST00000488111 C10orf128Q5T292 105 aa11.82□□□□□ -0.52
COPS7B-221ENST00000488111 ZNF100Q8IYN0 542 aa11.82□□□□□ -0.52
COPS7B-221ENST00000488111 OR13G1Q8NGZ3 307 aa11.82□□□□□ -0.52
COPS7B-221ENST00000488111 SMIM3Q9BZL3 60 aa11.82□□□□□ -0.52
COPS7B-221ENST00000488111 PRSS50Q9UI38 385 aa11.82□□□□□ -0.52
COPS7B-221ENST00000488111 OR52A1Q9UKL2 312 aa11.82□□□□□ -0.52
COPS7B-221ENST00000488111 STRAPQ9Y3F4 350 aaKnown RBP11.82□□□□□ -0.52
COPS7B-221ENST00000488111 NBEAQ8NFP9 2946 aa11.82□□□□□ -0.52
COPS7B-221ENST00000488111 A0A1B0GWJ7 208 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 ZNF587BE7ETH6 402 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 HIST1H2BKO60814 126 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 HIST1H2BJP06899 126 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 SFTPBP07988 381 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 NR2C1P13056 603 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 HIST1H2BOP23527 126 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 HIST1H2BBP33778 126 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 ZNF84P51523 738 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 HIST1H2BDP58876 126 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 HIST1H2BCP62807 126 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 HIST2H2BEQ16778 126 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 CEACAM16Q2WEN9 425 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 KHDC3LQ587J8 217 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.81□□□□□ -0.52
COPS7B-221ENST00000488111 RTL6Q6ICC9 239 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 GFRALQ6UXV0 394 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 FOXRED2Q8IWF2 684 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 SLC22A24Q8N4F4 322 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 OR52N4Q8NGI2 321 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 ST7LQ8TDW4 575 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 HIST1H2BHQ93079 126 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 APH1AQ96BI3 265 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 TMEM68Q96MH6 324 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 HIST1H2BNQ99877 126 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 HIST1H2BMQ99879 126 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 GINS3Q9BRX5 216 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 SMDT1Q9H4I9 107 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 GPR35Q9HC97 309 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 POLR1DQ9Y2S0 133 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 FBXO7Q9Y3I1 522 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 MMP24Q9Y5R2 645 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 A0A087WWC5 75 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 A0A0A6YYD4 124 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 CHRM2P08172 466 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 SOD3P08294 240 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 OR13C7P0DN81 318 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 CEACAM6P40199 344 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 GUCA1AP43080 201 aaPredicted RBP11.81□□□□□ -0.52
COPS7B-221ENST00000488111 FOXF2Q12947 444 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 PCK2Q16822 640 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 ZNF674Q2M3X9 581 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 AADACL3Q5VUY0 350 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 ZNF529Q6P280 563 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 SEM1Q6ZVN7 128 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 DCXRQ7Z4W1 244 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 CNEP1R1Q8N9A8 125 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 OR13C9Q8NGT0 318 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 ERGIC1Q969X5 290 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 GMPPAQ96IJ6 420 aaPredicted RBP11.81□□□□□ -0.52
COPS7B-221ENST00000488111 LURAP1Q96LR2 239 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 PLEKHA2Q9HB19 425 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms