RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 E9PQ18 207 aa6.78□□□□□ -1.32
PRKCB-208ENST00000487674 SLC33A1O00400 549 aaPredicted RBP6.78□□□□□ -1.32
PRKCB-208ENST00000487674 HTR1AP08908 422 aa6.78□□□□□ -1.32
PRKCB-208ENST00000487674 FAM106CPP0CH98 169 aa6.78□□□□□ -1.32
PRKCB-208ENST00000487674 DBTP11182 482 aaKnown RBP6.78□□□□□ -1.32
PRKCB-208ENST00000487674 FSTP19883 344 aa6.78□□□□□ -1.32
PRKCB-208ENST00000487674 OR3A4PP47883 348 aa6.78□□□□□ -1.32
PRKCB-208ENST00000487674 KRTAP10-11P60412 298 aa6.78□□□□□ -1.32
PRKCB-208ENST00000487674 SCN1BQ07699 218 aa6.78□□□□□ -1.32
PRKCB-208ENST00000487674 RBM39Q14498 530 aaKnown RBP6.78□□□□□ -1.32
PRKCB-208ENST00000487674 C17orf58Q2M2W7 97 aa6.78□□□□□ -1.32
PRKCB-208ENST00000487674 C9orf152Q5JTZ5 239 aa6.78□□□□□ -1.32
PRKCB-208ENST00000487674 C1orf146Q5VVC0 180 aa6.78□□□□□ -1.32
PRKCB-208ENST00000487674 Q6P435 159 aa6.78□□□□□ -1.32
PRKCB-208ENST00000487674 AMIGO2Q86SJ2 522 aa6.78□□□□□ -1.32
PRKCB-208ENST00000487674 OR51D1Q8NGF3 324 aa6.78□□□□□ -1.32
PRKCB-208ENST00000487674 OR51A4Q8NGJ6 313 aa6.78□□□□□ -1.32
PRKCB-208ENST00000487674 OR10AC1Q8NH08 325 aa6.78□□□□□ -1.32
PRKCB-208ENST00000487674 OR9G1Q8NH87 305 aa6.78□□□□□ -1.32
PRKCB-208ENST00000487674 TRUB1Q8WWH5 349 aaKnown RBP6.78□□□□□ -1.32
PRKCB-208ENST00000487674 DPF1Q92782 380 aa6.78□□□□□ -1.32
PRKCB-208ENST00000487674 TOMM40LQ969M1 308 aa6.78□□□□□ -1.32
PRKCB-208ENST00000487674 RPEQ96AT9 228 aa6.78□□□□□ -1.32
PRKCB-208ENST00000487674 RNFT2Q96EX2 444 aa6.78□□□□□ -1.32
PRKCB-208ENST00000487674 CENPNQ96H22 339 aaPredicted RBP6.78□□□□□ -1.32
PRKCB-208ENST00000487674 KIRREL1Q96J84 757 aa6.78□□□□□ -1.32
PRKCB-208ENST00000487674 SPACA5Q96QH8 159 aa6.78□□□□□ -1.32
PRKCB-208ENST00000487674 OSBPL10Q9BXB5 764 aa6.78□□□□□ -1.32
PRKCB-208ENST00000487674 PPIL3Q9H2H8 161 aaKnown RBP6.78□□□□□ -1.32
PRKCB-208ENST00000487674 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.78□□□□□ -1.32
PRKCB-208ENST00000487674 NBEAL2Q6ZNJ1 2754 aa6.78□□□□□ -1.32
PRKCB-208ENST00000487674 KBTBD11-OT1A0A1B0GTJ5 212 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 WI2-2373I1.2A0A1W2PRP0 233 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 FAM90A18PA6NE21 464 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 FAM90A16PA6NEW6 464 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 FAM90A20PA6NIJ5 464 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 OR4C45A6NMZ5 311 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 FAM90A9PA6NNJ1 464 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 FAM90A12PA8MX19 464 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 FAM90A5PA8MXJ8 464 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 J3QRE1 110 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 DEGS1O15121 323 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 SULT1B1O43704 296 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 SNRNP70P08621 437 aaKnown RBP6.77□□□□□ -1.33
PRKCB-208ENST00000487674 HCKP08631 526 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 FAM90A15PP0C7V4 464 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 FAM90A13PP0C7W8 464 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 FAM90A14PP0C7W9 464 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 FAM90A24PP0C7X0 464 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 NFYBP25208 207 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 SLC6A1P30531 599 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 GLP1RP43220 463 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 ZP1P60852 638 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 RPL23AP62750 156 aaKnown RBP6.77□□□□□ -1.33
PRKCB-208ENST00000487674 BNIP1Q12981 228 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 DCTN2Q13561 401 aaKnown RBP6.77□□□□□ -1.33
PRKCB-208ENST00000487674 CDK5R1Q15078 307 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 SLC25A30Q5SVS4 291 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 UTF1Q5T230 341 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 MEDAGQ5VYS4 303 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 C11orf87Q6NUJ2 197 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 ETV3LQ6ZN32 361 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 RNF144BQ7Z419 303 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 THNSL2Q86YJ6 484 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 MRPL41Q8IXM3 137 aaKnown RBP6.77□□□□□ -1.33
PRKCB-208ENST00000487674 ACBD7Q8N6N7 88 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 OR51T1Q8NGJ9 327 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 OR56B4Q8NH76 319 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 PELI1Q96FA3 418 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 CPNE2Q96FN4 548 aaPredicted RBP6.77□□□□□ -1.33
PRKCB-208ENST00000487674 MRPL48Q96GC5 212 aaKnown RBP6.77□□□□□ -1.33
PRKCB-208ENST00000487674 CITED4Q96RK1 184 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 ZNF649Q9BS31 505 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 NCOR1P1Q9H4R4 102 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 ZCCHC4Q9H5U6 513 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 ING3Q9NXR8 418 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 CALYQ9NYX4 217 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 KIF25Q9UIL4 384 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 MYRFQ9Y2G1 1151 aa6.77□□□□□ -1.33
PRKCB-208ENST00000487674 COL7A1Q02388 2944 aa6.76□□□□□ -1.33
PRKCB-208ENST00000487674 MEIKINA0A087WXM9 373 aa6.76□□□□□ -1.33
PRKCB-208ENST00000487674 A0A1W2PPI3 338 aa6.76□□□□□ -1.33
PRKCB-208ENST00000487674 SAC3D1A6NKF1 404 aa6.76□□□□□ -1.33
PRKCB-208ENST00000487674 SNTNA6NMZ2 147 aa6.76□□□□□ -1.33
PRKCB-208ENST00000487674 H0YJX3 145 aa6.76□□□□□ -1.33
PRKCB-208ENST00000487674 J3QLW9 94 aa6.76□□□□□ -1.33
PRKCB-208ENST00000487674 J3QR06 171 aa6.76□□□□□ -1.33
PRKCB-208ENST00000487674 HSPB6O14558 160 aa6.76□□□□□ -1.33
PRKCB-208ENST00000487674 FGF16O43320 207 aa6.76□□□□□ -1.33
PRKCB-208ENST00000487674 IL1AP01583 271 aa6.76□□□□□ -1.33
PRKCB-208ENST00000487674 ALPLP05186 524 aa6.76□□□□□ -1.33
PRKCB-208ENST00000487674 RPSAP08865 295 aaKnown RBP6.76□□□□□ -1.33
PRKCB-208ENST00000487674 CGB3P0DN86 165 aa6.76□□□□□ -1.33
PRKCB-208ENST00000487674 CGB7P0DN87 165 aa6.76□□□□□ -1.33
PRKCB-208ENST00000487674 TMEM225BP0DP42 221 aa6.76□□□□□ -1.33
PRKCB-208ENST00000487674 ZNF19P17023 458 aa6.76□□□□□ -1.33
PRKCB-208ENST00000487674 HOXD3P31249 432 aaPredicted RBP6.76□□□□□ -1.33
PRKCB-208ENST00000487674 MTNR1BP49286 362 aa6.76□□□□□ -1.33
PRKCB-208ENST00000487674 THBS3P49746 956 aa6.76□□□□□ -1.33
PRKCB-208ENST00000487674 RASSF2P50749 326 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms