RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 BAIAP2L2Q6UXY1 529 aa16.52■□□□□ 0.24
HDAC4-209ENST00000487617 HEPN1Q6WQI6 88 aa16.52■□□□□ 0.24
HDAC4-209ENST00000487617 LIAT1Q6ZQX7 453 aa16.52■□□□□ 0.24
HDAC4-209ENST00000487617 ABHD12Q8N2K0 398 aa16.52■□□□□ 0.24
HDAC4-209ENST00000487617 CITED1Q99966 193 aa16.52■□□□□ 0.24
HDAC4-209ENST00000487617 IL36GQ9NZH8 169 aa16.52■□□□□ 0.24
HDAC4-209ENST00000487617 HILPDAQ9Y5L2 63 aa16.52■□□□□ 0.24
HDAC4-209ENST00000487617 DSCAML1Q8TD84 2053 aa16.52■□□□□ 0.23
HDAC4-209ENST00000487617 MAGEA13PA6NCF6 341 aa16.51■□□□□ 0.23
HDAC4-209ENST00000487617 ERICH4A6NGS2 130 aa16.51■□□□□ 0.23
HDAC4-209ENST00000487617 PTGES3LE9PB15 166 aa16.51■□□□□ 0.23
HDAC4-209ENST00000487617 CDK1P06493 297 aa16.51■□□□□ 0.23
HDAC4-209ENST00000487617 FSTP19883 344 aa16.51■□□□□ 0.23
HDAC4-209ENST00000487617 SERPINA2P20848 420 aa16.51■□□□□ 0.23
HDAC4-209ENST00000487617 GABRA5P31644 462 aa16.51■□□□□ 0.23
HDAC4-209ENST00000487617 DOC2BQ14184 412 aa16.51■□□□□ 0.23
HDAC4-209ENST00000487617 OSR2Q8N2R0 312 aa16.51■□□□□ 0.23
HDAC4-209ENST00000487617 OR4D6Q8NGJ1 314 aa16.51■□□□□ 0.23
HDAC4-209ENST00000487617 OR4C13Q8NGP0 309 aa16.51■□□□□ 0.23
HDAC4-209ENST00000487617 PAK1IP1Q9NWT1 392 aaPredicted RBP16.51■□□□□ 0.23
HDAC4-209ENST00000487617 ST3GAL6Q9Y274 331 aa16.51■□□□□ 0.23
HDAC4-209ENST00000487617 MEIKINA0A087WXM9 373 aa16.5■□□□□ 0.23
HDAC4-209ENST00000487617 FAM172BPA6NC97 362 aa16.5■□□□□ 0.23
HDAC4-209ENST00000487617 ZNF729A6NN14 1252 aaPredicted RBP16.5■□□□□ 0.23
HDAC4-209ENST00000487617 CHST1O43916 411 aa16.5■□□□□ 0.23
HDAC4-209ENST00000487617 CD1AP06126 327 aa16.5■□□□□ 0.23
HDAC4-209ENST00000487617 GDNFP39905 211 aa16.5■□□□□ 0.23
HDAC4-209ENST00000487617 GLP1RP43220 463 aa16.5■□□□□ 0.23
HDAC4-209ENST00000487617 RTN4RL2Q86UN3 420 aa16.5■□□□□ 0.23
HDAC4-209ENST00000487617 MYDGFQ969H8 173 aa16.5■□□□□ 0.23
HDAC4-209ENST00000487617 DERL3Q96Q80 235 aa16.5■□□□□ 0.23
HDAC4-209ENST00000487617 MND1Q9BWT6 205 aa16.5■□□□□ 0.23
HDAC4-209ENST00000487617 BARHL1Q9BZE3 327 aa16.5■□□□□ 0.23
HDAC4-209ENST00000487617 PCDHB16Q9NRJ7 776 aa16.5■□□□□ 0.23
HDAC4-209ENST00000487617 SCN3BQ9NY72 215 aa16.5■□□□□ 0.23
HDAC4-209ENST00000487617 FBLN5Q9UBX5 448 aa16.5■□□□□ 0.23
HDAC4-209ENST00000487617 KIF25Q9UIL4 384 aa16.5■□□□□ 0.23
HDAC4-209ENST00000487617 FOXJ3Q9UPW0 622 aa16.5■□□□□ 0.23
HDAC4-209ENST00000487617 TCF19Q9Y242 345 aa16.5■□□□□ 0.23
HDAC4-209ENST00000487617 OR7C1O76099 320 aaPredicted RBP16.49■□□□□ 0.23
HDAC4-209ENST00000487617 HTR1DP28221 377 aa16.49■□□□□ 0.23
HDAC4-209ENST00000487617 KCNJ3P48549 501 aa16.49■□□□□ 0.23
HDAC4-209ENST00000487617 RBM11P57052 281 aaKnown RBP16.49■□□□□ 0.23
HDAC4-209ENST00000487617 BDH1Q02338 343 aa16.49■□□□□ 0.23
HDAC4-209ENST00000487617 C17orf58Q2M2W7 97 aa16.49■□□□□ 0.23
HDAC4-209ENST00000487617 SLC22A6Q4U2R8 563 aa16.49■□□□□ 0.23
HDAC4-209ENST00000487617 NHLRC3Q5JS37 347 aa16.49■□□□□ 0.23
HDAC4-209ENST00000487617 JAGN1Q8N5M9 183 aa16.49■□□□□ 0.23
HDAC4-209ENST00000487617 ZNF565Q8N9K5 539 aa16.49■□□□□ 0.23
HDAC4-209ENST00000487617 SUMF2Q8NBJ7 301 aa16.49■□□□□ 0.23
HDAC4-209ENST00000487617 OR4P4Q8NGL7 312 aa16.49■□□□□ 0.23
HDAC4-209ENST00000487617 ZNF596Q8TC21 504 aa16.49■□□□□ 0.23
HDAC4-209ENST00000487617 MUL1Q969V5 352 aa16.49■□□□□ 0.23
HDAC4-209ENST00000487617 DPCDQ9BVM2 203 aaPredicted RBP16.49■□□□□ 0.23
HDAC4-209ENST00000487617 NPFFR1Q9GZQ6 430 aa16.49■□□□□ 0.23
HDAC4-209ENST00000487617 TCF7L1Q9HCS4 588 aa16.49■□□□□ 0.23
HDAC4-209ENST00000487617 ZNF581Q9P0T4 197 aa16.49■□□□□ 0.23
HDAC4-209ENST00000487617 SIGLEC9Q9Y336 463 aa16.49■□□□□ 0.23
HDAC4-209ENST00000487617 KBTBD11-OT1A0A1B0GTJ5 212 aa16.48■□□□□ 0.23
HDAC4-209ENST00000487617 F2RL2O00254 374 aa16.48■□□□□ 0.23
HDAC4-209ENST00000487617 ZNF780AO75290 641 aaPredicted RBP16.48■□□□□ 0.23
HDAC4-209ENST00000487617 MAS1P04201 325 aa16.48■□□□□ 0.23
HDAC4-209ENST00000487617 JUNBP17275 347 aaPredicted RBP16.48■□□□□ 0.23
HDAC4-209ENST00000487617 CD34P28906 385 aa16.48■□□□□ 0.23
HDAC4-209ENST00000487617 KIR2DS4P43632 304 aa16.48■□□□□ 0.23
HDAC4-209ENST00000487617 DYNLT3P51808 116 aa16.48■□□□□ 0.23
HDAC4-209ENST00000487617 RSBN1Q5VWQ0 802 aaPredicted RBP16.48■□□□□ 0.23
HDAC4-209ENST00000487617 RNLSQ5VYX0 342 aa16.48■□□□□ 0.23
HDAC4-209ENST00000487617 TMEM219Q86XT9 240 aa16.48■□□□□ 0.23
HDAC4-209ENST00000487617 OR13A1Q8NGR1 328 aa16.48■□□□□ 0.23
HDAC4-209ENST00000487617 PLPPR1Q8TBJ4 325 aa16.48■□□□□ 0.23
HDAC4-209ENST00000487617 CDCA4Q9BXL8 241 aa16.48■□□□□ 0.23
HDAC4-209ENST00000487617 NCOR1P1Q9H4R4 102 aa16.48■□□□□ 0.23
HDAC4-209ENST00000487617 RANBP3Q9H6Z4 567 aaPredicted RBP16.48■□□□□ 0.23
HDAC4-209ENST00000487617 ZNF286AQ9HBT8 521 aa16.48■□□□□ 0.23
HDAC4-209ENST00000487617 DPM3Q9P2X0 92 aa16.48■□□□□ 0.23
HDAC4-209ENST00000487617 PITPNC1Q9UKF7 332 aa16.48■□□□□ 0.23
HDAC4-209ENST00000487617 MRPS28Q9Y2Q9 187 aaKnown RBP16.48■□□□□ 0.23
HDAC4-209ENST00000487617 A0A1W2PP11 408 aa16.47■□□□□ 0.23
HDAC4-209ENST00000487617 A6NDX4 124 aa16.47■□□□□ 0.23
HDAC4-209ENST00000487617 TOR1AO14656 332 aa16.47■□□□□ 0.23
HDAC4-209ENST00000487617 GEMIN2O14893 280 aaKnown RBP16.47■□□□□ 0.23
HDAC4-209ENST00000487617 TIMM23O14925 209 aa16.47■□□□□ 0.23
HDAC4-209ENST00000487617 PIN1P1O15428 100 aa16.47■□□□□ 0.23
HDAC4-209ENST00000487617 GTF2F2P13984 249 aa16.47■□□□□ 0.23
HDAC4-209ENST00000487617 NFYBP25208 207 aa16.47■□□□□ 0.23
HDAC4-209ENST00000487617 MAPK3P27361 379 aaPredicted RBP16.47■□□□□ 0.23
HDAC4-209ENST00000487617 GPR176Q14439 515 aa16.47■□□□□ 0.23
HDAC4-209ENST00000487617 CCBE1Q6UXH8 406 aaPredicted RBP16.47■□□□□ 0.23
HDAC4-209ENST00000487617 TREML4Q6UXN2 200 aa16.47■□□□□ 0.23
HDAC4-209ENST00000487617 LINC00596Q86U02 117 aa16.47■□□□□ 0.23
HDAC4-209ENST00000487617 OR2T6Q8NHC8 308 aa16.47■□□□□ 0.23
HDAC4-209ENST00000487617 SGCDQ92629 289 aa16.47■□□□□ 0.23
HDAC4-209ENST00000487617 THRSPQ92748 146 aa16.47■□□□□ 0.23
HDAC4-209ENST00000487617 VCX3BQ9H321 246 aa16.47■□□□□ 0.23
HDAC4-209ENST00000487617 IFT22Q9H7X7 185 aa16.47■□□□□ 0.23
HDAC4-209ENST00000487617 CALYQ9NYX4 217 aa16.47■□□□□ 0.23
HDAC4-209ENST00000487617 CGB3P0DN86 165 aa16.46■□□□□ 0.23
HDAC4-209ENST00000487617 CGB7P0DN87 165 aa16.46■□□□□ 0.23
HDAC4-209ENST00000487617 PRRX1P54821 245 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms