RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 CCL28Q9NRJ3 127 aa10.24□□□□□ -0.77
TRA2B-214ENST00000487615 RRP8O43159 456 aaKnown RBP10.23□□□□□ -0.77
TRA2B-214ENST00000487615 P2RY1P47900 373 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 KCNJ3P48549 501 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 ZNF816Q0VGE8 651 aaPredicted RBP10.23□□□□□ -0.77
TRA2B-214ENST00000487615 TGIF1Q15583 401 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 ALKBH6Q3KRA9 238 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 CST9LP1Q5W188 147 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 LINC00596Q86U02 117 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 SLC35G3Q8N808 338 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 ZNF703Q9H7S9 590 aaPredicted RBP10.23□□□□□ -0.77
TRA2B-214ENST00000487615 GNG13Q9P2W3 67 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 FBLN5Q9UBX5 448 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 LPAR3Q9UBY5 353 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 ATPIF1Q9UII2 106 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 TINAGQ9UJW2 476 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 OR8U8P0C7N1 319 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 COX5BP10606 129 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 NKX6-1P78426 367 aaPredicted RBP10.23□□□□□ -0.77
TRA2B-214ENST00000487615 TESK1Q15569 626 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 GUK1Q16774 197 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 SLC25A40Q8TBP6 338 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 H1FXQ92522 213 aaKnown RBP10.23□□□□□ -0.77
TRA2B-214ENST00000487615 ERGIC1Q969X5 290 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 TAAR6Q96RI8 345 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 CACNG5Q9UF02 275 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 CACNA1HO95180 2353 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 SYNGR3O43761 229 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 CD8AP01732 235 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 HEXAP06865 529 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 SFTA3P0C7M3 94 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 OR3A1P47881 315 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 RSPO4Q2I0M5 234 aaPredicted RBP10.23□□□□□ -0.77
TRA2B-214ENST00000487615 NHLRC3Q5JS37 347 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 PHYHD1Q5SRE7 291 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 WFDC8Q8IUA0 241 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 C17orf78Q8N4C9 275 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 CLRN3Q8NCR9 226 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 RFESDQ8TAC1 157 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 AKR1E2Q96JD6 320 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 SIGLEC12Q96PQ1 595 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 OR2J1Q9GZK6 312 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 CXXC4Q9H2H0 198 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 FAM96BQ9Y3D0 163 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 FAM90A10PA6NDY2 464 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 BTBD17A6NE02 478 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 FAM90A18PA6NE21 464 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 FAM90A16PA6NEW6 464 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 FAM90A20PA6NIJ5 464 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 FAM90A8PA6NJQ4 464 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 FAM90A7PA6NKC0 464 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 FAM90A22PA8MWA6 464 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 FAM90A12PA8MX19 464 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 FAM90A5PA8MXJ8 464 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 FAM90A23PA8MXZ1 464 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 ZNHIT1O43257 154 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 KCNAB3O43448 404 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 FAM90A15PP0C7V4 464 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 FAM90A13PP0C7W8 464 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 FAM90A14PP0C7W9 464 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 FAM90A24PP0C7X0 464 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 KITLGP21583 273 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 PTGDSP41222 190 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 PSMB3P49720 205 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 HLA-DRB3P79483 266 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 ANKRD55Q3KP44 614 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 STPG2Q8N412 459 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 KCNIP2Q9NS61 270 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 PRSS50Q9UI38 385 aa10.23□□□□□ -0.77
TRA2B-214ENST00000487615 SPRY3O43610 288 aa10.22□□□□□ -0.77
TRA2B-214ENST00000487615 DVL1P1P54792 670 aaPredicted RBP10.22□□□□□ -0.77
TRA2B-214ENST00000487615 TMEM50BP56557 158 aa10.22□□□□□ -0.77
TRA2B-214ENST00000487615 PMP22Q01453 160 aa10.22□□□□□ -0.77
TRA2B-214ENST00000487615 C2orf68Q2NKX9 166 aa10.22□□□□□ -0.77
TRA2B-214ENST00000487615 TIPARPQ7Z3E1 657 aaKnown RBP10.22□□□□□ -0.77
TRA2B-214ENST00000487615 TMEM45BQ96B21 275 aa10.22□□□□□ -0.77
TRA2B-214ENST00000487615 ADGRG7Q96K78 797 aa10.22□□□□□ -0.77
TRA2B-214ENST00000487615 ZNF488Q96MN9 340 aa10.22□□□□□ -0.77
TRA2B-214ENST00000487615 LINC00470Q9BZP3 86 aa10.22□□□□□ -0.77
TRA2B-214ENST00000487615 OR5AC2Q9NZP5 309 aa10.22□□□□□ -0.77
TRA2B-214ENST00000487615 ATP23Q9Y6H3 246 aa10.22□□□□□ -0.77
TRA2B-214ENST00000487615 TMEM218A2RU14 115 aa10.22□□□□□ -0.77
TRA2B-214ENST00000487615 PTAFRP25105 342 aa10.22□□□□□ -0.77
TRA2B-214ENST00000487615 FLI1Q01543 452 aaPredicted RBP10.22□□□□□ -0.77
TRA2B-214ENST00000487615 CLEC9AQ6UXN8 241 aa10.22□□□□□ -0.77
TRA2B-214ENST00000487615 OR4A4PQ8NGN8 299 aa10.22□□□□□ -0.77
TRA2B-214ENST00000487615 LRRC29Q8WV35 223 aa10.22□□□□□ -0.77
TRA2B-214ENST00000487615 LHX4Q969G2 390 aa10.22□□□□□ -0.77
TRA2B-214ENST00000487615 FN3KRPQ9HA64 309 aa10.22□□□□□ -0.77
TRA2B-214ENST00000487615 GCM1Q9NP62 436 aa10.22□□□□□ -0.77
TRA2B-214ENST00000487615 ZNF319Q9P2F9 582 aa10.22□□□□□ -0.77
TRA2B-214ENST00000487615 OR2W1Q9Y3N9 320 aa10.22□□□□□ -0.77
TRA2B-214ENST00000487615 ZNF385CQ66K41 422 aaPredicted RBP10.22□□□□□ -0.77
TRA2B-214ENST00000487615 ADAM5Q6NVV9 412 aa10.22□□□□□ -0.77
TRA2B-214ENST00000487615 ESRP2Q9H6T0 727 aaKnown RBP10.22□□□□□ -0.77
TRA2B-214ENST00000487615 CACNA1DQ01668 2161 aa10.21□□□□□ -0.77
TRA2B-214ENST00000487615 CYB5BO43169 146 aa10.21□□□□□ -0.77
TRA2B-214ENST00000487615 FTH1P19P0C7X4 201 aa10.21□□□□□ -0.77
TRA2B-214ENST00000487615 CCL1P22362 96 aa10.21□□□□□ -0.77
TRA2B-214ENST00000487615 ACKR3P25106 362 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms