RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 OR4E1P0C645 316 aa11.96□□□□□ -0.5
CUX1-209ENST00000487284 SELENOVP59797 346 aa11.96□□□□□ -0.5
CUX1-209ENST00000487284 AADACL3Q5VUY0 350 aa11.96□□□□□ -0.5
CUX1-209ENST00000487284 SHEQ5VZ18 495 aa11.96□□□□□ -0.5
CUX1-209ENST00000487284 ZNF660Q6AZW8 331 aaPredicted RBP11.96□□□□□ -0.5
CUX1-209ENST00000487284 SP5Q6BEB4 398 aaPredicted RBP11.96□□□□□ -0.5
CUX1-209ENST00000487284 FAHD2BQ6P2I3 314 aaPredicted RBP11.96□□□□□ -0.5
CUX1-209ENST00000487284 FIP1L1Q6UN15 594 aaKnown RBP11.96□□□□□ -0.5
CUX1-209ENST00000487284 MUC20Q8N307 709 aaPredicted RBP11.96□□□□□ -0.5
CUX1-209ENST00000487284 SPICQ8N5J4 248 aa11.96□□□□□ -0.5
CUX1-209ENST00000487284 MARCH1Q8TCQ1 289 aa11.96□□□□□ -0.5
CUX1-209ENST00000487284 NEK7Q8TDX7 302 aa11.96□□□□□ -0.5
CUX1-209ENST00000487284 ZNF431Q8TF32 576 aaPredicted RBP11.96□□□□□ -0.5
CUX1-209ENST00000487284 ELMOD3Q96FG2 381 aa11.96□□□□□ -0.5
CUX1-209ENST00000487284 FAHD2AQ96GK7 314 aa11.96□□□□□ -0.5
CUX1-209ENST00000487284 DMRTB1Q96MA1 342 aa11.96□□□□□ -0.5
CUX1-209ENST00000487284 DHRS9Q9BPW9 319 aa11.96□□□□□ -0.5
CUX1-209ENST00000487284 DPCDQ9BVM2 203 aaPredicted RBP11.96□□□□□ -0.5
CUX1-209ENST00000487284 RIMS4Q9H426 269 aaPredicted RBP11.96□□□□□ -0.5
CUX1-209ENST00000487284 NECAP2Q9NVZ3 263 aa11.96□□□□□ -0.5
CUX1-209ENST00000487284 TAAR3PQ9P1P4 343 aa11.96□□□□□ -0.5
CUX1-209ENST00000487284 NPTNQ9Y639 398 aa11.96□□□□□ -0.5
CUX1-209ENST00000487284 TANC2Q9HCD6 1990 aa11.95□□□□□ -0.5
CUX1-209ENST00000487284 POM121CA8CG34 1229 aa11.95□□□□□ -0.5
CUX1-209ENST00000487284 DEGS1O15121 323 aa11.95□□□□□ -0.5
CUX1-209ENST00000487284 ANXA3P12429 323 aa11.95□□□□□ -0.5
CUX1-209ENST00000487284 ZNF44P15621 663 aa11.95□□□□□ -0.5
CUX1-209ENST00000487284 FPR2P25090 351 aa11.95□□□□□ -0.5
CUX1-209ENST00000487284 COL8A1P27658 744 aa11.95□□□□□ -0.5
CUX1-209ENST00000487284 APOBEC3AP31941 199 aaPredicted RBP11.95□□□□□ -0.5
CUX1-209ENST00000487284 SERPINF1P36955 418 aa11.95□□□□□ -0.5
CUX1-209ENST00000487284 CFHR2P36980 270 aa11.95□□□□□ -0.5
CUX1-209ENST00000487284 MDH2P40926 338 aaKnown RBP11.95□□□□□ -0.5
CUX1-209ENST00000487284 C4orf46Q504U0 113 aa11.95□□□□□ -0.5
CUX1-209ENST00000487284 C17orf107Q6ZR85 190 aa11.95□□□□□ -0.5
CUX1-209ENST00000487284 OR10Z1Q8NGY1 313 aa11.95□□□□□ -0.5
CUX1-209ENST00000487284 SCGB3A2Q96PL1 93 aa11.95□□□□□ -0.5
CUX1-209ENST00000487284 TRAF4Q9BUZ4 470 aaPredicted RBP11.95□□□□□ -0.5
CUX1-209ENST00000487284 CHMP1AQ9HD42 196 aaPredicted RBP11.95□□□□□ -0.5
CUX1-209ENST00000487284 Q9N2K0 584 aa11.95□□□□□ -0.5
CUX1-209ENST00000487284 UFSP2Q9NUQ7 469 aa11.95□□□□□ -0.5
CUX1-209ENST00000487284 TREM2Q9NZC2 230 aa11.95□□□□□ -0.5
CUX1-209ENST00000487284 GPR132Q9UNW8 380 aa11.95□□□□□ -0.5
CUX1-209ENST00000487284 DYSFO75923 2080 aa11.95□□□□□ -0.5
CUX1-209ENST00000487284 CACNA1DQ01668 2161 aa11.94□□□□□ -0.5
CUX1-209ENST00000487284 ARFGEF3Q5TH69 2177 aa11.94□□□□□ -0.5
CUX1-209ENST00000487284 RAI1Q7Z5J4 1906 aaPredicted RBP11.94□□□□□ -0.5
CUX1-209ENST00000487284 VSTM5A8MXK1 200 aa11.94□□□□□ -0.5
CUX1-209ENST00000487284 SLC33A1O00400 549 aaPredicted RBP11.94□□□□□ -0.5
CUX1-209ENST00000487284 HS3ST1O14792 307 aa11.94□□□□□ -0.5
CUX1-209ENST00000487284 SH2D1BO14796 132 aa11.94□□□□□ -0.5
CUX1-209ENST00000487284 OR2H2O95918 312 aa11.94□□□□□ -0.5
CUX1-209ENST00000487284 OR5H8P0DN80 308 aa11.94□□□□□ -0.5
CUX1-209ENST00000487284 COX6B1P14854 86 aa11.94□□□□□ -0.5
CUX1-209ENST00000487284 ECI1P42126 302 aa11.94□□□□□ -0.5
CUX1-209ENST00000487284 NPY4RP50391 375 aa11.94□□□□□ -0.5
CUX1-209ENST00000487284 TAS2R31P59538 309 aa11.94□□□□□ -0.5
CUX1-209ENST00000487284 UBE2MP61081 183 aaKnown RBP11.94□□□□□ -0.5
CUX1-209ENST00000487284 SURF2Q15527 256 aaPredicted RBP11.94□□□□□ -0.5
CUX1-209ENST00000487284 ACP7Q6ZNF0 438 aa11.94□□□□□ -0.5
CUX1-209ENST00000487284 RDH5Q92781 318 aa11.94□□□□□ -0.5
CUX1-209ENST00000487284 MEGF10Q96KG7 1140 aa11.94□□□□□ -0.5
CUX1-209ENST00000487284 DECR2Q9NUI1 292 aa11.94□□□□□ -0.5
CUX1-209ENST00000487284 C1orf123Q9NWV4 160 aa11.94□□□□□ -0.5
CUX1-209ENST00000487284 ZNF222Q9UK12 451 aa11.94□□□□□ -0.5
CUX1-209ENST00000487284 PTPN13Q12923 2485 aa11.94□□□□□ -0.5
CUX1-209ENST00000487284 OR5H14A6NHG9 310 aa11.93□□□□□ -0.5
CUX1-209ENST00000487284 HSPB6O14558 160 aa11.93□□□□□ -0.5
CUX1-209ENST00000487284 WNT9BO14905 357 aa11.93□□□□□ -0.5
CUX1-209ENST00000487284 GOSR1O95249 250 aa11.93□□□□□ -0.5
CUX1-209ENST00000487284 HAND1O96004 215 aa11.93□□□□□ -0.5
CUX1-209ENST00000487284 KNG1P01042 644 aa11.93□□□□□ -0.5
CUX1-209ENST00000487284 C1QBP02746 253 aa11.93□□□□□ -0.5
CUX1-209ENST00000487284 GLRA1P23415 457 aa11.93□□□□□ -0.5
CUX1-209ENST00000487284 ZBTB25P24278 435 aa11.93□□□□□ -0.5
CUX1-209ENST00000487284 LMO1P25800 156 aa11.93□□□□□ -0.5
CUX1-209ENST00000487284 GATA4P43694 442 aa11.93□□□□□ -0.5
CUX1-209ENST00000487284 ZNF81P51508 661 aa11.93□□□□□ -0.5
CUX1-209ENST00000487284 DHRS2Q13268 280 aa11.93□□□□□ -0.5
CUX1-209ENST00000487284 SMIM21Q3B7S5 101 aa11.93□□□□□ -0.5
CUX1-209ENST00000487284 PAN3Q58A45 887 aaKnown RBP11.93□□□□□ -0.5
CUX1-209ENST00000487284 ZNF880Q6PDB4 577 aa11.93□□□□□ -0.5
CUX1-209ENST00000487284 DHRS11Q6UWP2 260 aa11.93□□□□□ -0.5
CUX1-209ENST00000487284 LYG2Q86SG7 212 aa11.93□□□□□ -0.5
CUX1-209ENST00000487284 GAPTQ8N292 157 aa11.93□□□□□ -0.5
CUX1-209ENST00000487284 MUC15Q8N387 334 aa11.93□□□□□ -0.5
CUX1-209ENST00000487284 TMEM185AQ8NFB2 350 aa11.93□□□□□ -0.5
CUX1-209ENST00000487284 MRPL30Q8TCC3 161 aaKnown RBP11.93□□□□□ -0.5
CUX1-209ENST00000487284 OR2V2Q96R30 315 aa11.93□□□□□ -0.5
CUX1-209ENST00000487284 WDR13Q9H1Z4 485 aa11.93□□□□□ -0.5
CUX1-209ENST00000487284 C5orf66Q9H5L9 145 aa11.93□□□□□ -0.5
CUX1-209ENST00000487284 MGAT4CQ9UBM8 478 aa11.93□□□□□ -0.5
CUX1-209ENST00000487284 TACC2O95359 2948 aa11.93□□□□□ -0.5
CUX1-209ENST00000487284 DSCAMO60469 2012 aa11.93□□□□□ -0.5
CUX1-209ENST00000487284 KIR2DS1A0A191URI9 304 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 hCG_1807616A0A1W2PRN6 198 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 SRRM5B3KS81 715 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 SIRPB1O00241 398 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 SPRY3O43610 288 aa11.92□□□□□ -0.5
CUX1-209ENST00000487284 ADH4P08319 380 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms