RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-205	ENST00000486941	SPI1	P17947	270 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	PAICS	P22234	425 aa	Known RBP	3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	GLRA1	P23415	457 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	ACKR3	P25106	362 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	HSD11B1	P28845	292 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	RRM2	P31350	389 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	OPRL1	P41146	370 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	GABRA2	P47869	451 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	NUDT2	P50583	147 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	ZNF121	P58317	390 aa	Predicted RBP	3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	GMFB	P60983	142 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	PRDX4	Q13162	271 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	EIF2B1	Q14232	305 aa	Known RBP	3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	NSUN5P1	Q3KNT7	163 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	LINC01590	Q5TEZ4	76 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	ZNF770	Q6IQ21	691 aa	Predicted RBP	3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	RASSF6	Q6ZTQ3	369 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	CALHM1	Q8IU99	346 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	TIGD4	Q8IY51	512 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	MKX	Q8IYA7	352 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	C11orf42	Q8N5U0	333 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	ZNRF1	Q8ND25	227 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	OR6K6	Q8NGW6	343 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	OR52I2	Q8NH67	350 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	ZNF671	Q8TAW3	534 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	PIGC	Q92535	297 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	RORB	Q92753	470 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	RPL3L	Q92901	407 aa	Known RBP	3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	PHF21A	Q96BD5	680 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	CMTM5	Q96DZ9	223 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	SDSL	Q96GA7	329 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	PGAM5	Q96HS1	289 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	RNF170	Q96K19	258 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	INTS14	Q96SY0	518 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	BTBD10	Q9BSF8	475 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	ABHD6	Q9BV23	337 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	TSSK6	Q9BXA6	273 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	OR51I2	Q9H344	312 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	EGLN3	Q9H6Z9	239 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	ZNF702P	Q9H963	129 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	IL1RAP	Q9NPH3	570 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	RASL12	Q9NYN1	266 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	ZNF319	Q9P2F9	582 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	TAGLN3	Q9UI15	199 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	ZNF222	Q9UK12	451 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	LYVE1	Q9Y5Y7	322 aa		3.15	□□□□□ -1.91
SNRNP40-205	ENST00000486941	SORL1	Q92673	2214 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941		A6NDX4	124 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	ACOD1	A6NK06	481 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	OR5B21	A6NL26	309 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	RIIAD1	A6NNX1	92 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	ZNF732	B4DXR9	585 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	TNFRSF11B	O00300	401 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	MTRF1	O75570	445 aa	Known RBP	3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	RHBDL1	O75783	438 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	CCNB2	O95067	398 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	TFF1	P04155	84 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	ALDOB	P05062	364 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	H2BFM	P0C1H6	154 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	CD28	P10747	220 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	CLU	P10909	449 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	ATP6V1B1	P15313	513 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	ZNF3	P17036	446 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	PRDX6	P30041	224 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	GPM6A	P51674	278 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	DYNLT3	P51808	116 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	BMX	P51813	675 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	RPL31	P62899	125 aa	Known RBP	3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	GNG3	P63215	75 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	CRMP1	Q14194	572 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	CEACAM21	Q3KPI0	293 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	SAMD4B	Q5PRF9	694 aa	Known RBP	3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	CCBE1	Q6UXH8	406 aa	Predicted RBP	3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	ERI1	Q8IV48	349 aa	Known RBP	3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	SPAG16	Q8N0X2	631 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	LYG1	Q8N1E2	194 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	ZNF561	Q8N587	486 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	RNF148	Q8N7C7	305 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	STPG4	Q8N801	248 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	TMEM185A	Q8NFB2	350 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	OR2T33	Q8NG76	320 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	OR9Q2	Q8NGE9	314 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	OR5A2	Q8NGI9	324 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	OR8D4	Q8NGM9	314 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	OR6N2	Q8NGY6	317 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	OR2T27	Q8NH04	317 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	OR4Q3	Q8NH05	313 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	HPSE2	Q8WWQ2	592 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	AQP3	Q92482	292 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	MALSU1	Q96EH3	234 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	NSMCE2	Q96MF7	247 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	AMELY	Q99218	206 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	NKX3-1	Q99801	234 aa	Predicted RBP	3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	CITED2	Q99967	270 aa	Predicted RBP	3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	DGCR6L	Q9BY27	220 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	FGF23	Q9GZV9	251 aa	Predicted RBP	3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	NIPAL2	Q9H841	368 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	YY1AP1	Q9H869	796 aa		3.14	□□□□□ -1.91
SNRNP40-205	ENST00000486941	SEBOX	Q9HB31	216 aa	Predicted RBP	3.14	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 78 ms