RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 SMIM3Q9BZL3 60 aa15.39■□□□□ 0.05
PDLIM7-207ENST00000486828 CARHSP1Q9Y2V2 147 aaKnown RBP15.39■□□□□ 0.05
PDLIM7-207ENST00000486828 MED13Q9UHV7 2174 aa15.38■□□□□ 0.05
PDLIM7-207ENST00000486828 TRGV5A0A0B4J1U4 118 aa15.38■□□□□ 0.05
PDLIM7-207ENST00000486828 KIR2DS1A0A191URI9 304 aa15.38■□□□□ 0.05
PDLIM7-207ENST00000486828 FAM74A7A6NL05 159 aa15.38■□□□□ 0.05
PDLIM7-207ENST00000486828 OR5B21A6NL26 309 aa15.38■□□□□ 0.05
PDLIM7-207ENST00000486828 TM4SF5O14894 197 aa15.38■□□□□ 0.05
PDLIM7-207ENST00000486828 SCTP09683 121 aa15.38■□□□□ 0.05
PDLIM7-207ENST00000486828 PRKACAP17612 351 aa15.38■□□□□ 0.05
PDLIM7-207ENST00000486828 KIR2DS4P43632 304 aa15.38■□□□□ 0.05
PDLIM7-207ENST00000486828 P2RY1P47900 373 aa15.38■□□□□ 0.05
PDLIM7-207ENST00000486828 CAV2P51636 162 aa15.38■□□□□ 0.05
PDLIM7-207ENST00000486828 RND3P61587 244 aa15.38■□□□□ 0.05
PDLIM7-207ENST00000486828 KIR2DS1Q14954 304 aa15.38■□□□□ 0.05
PDLIM7-207ENST00000486828 TGIF1Q15583 401 aa15.38■□□□□ 0.05
PDLIM7-207ENST00000486828 FAM74A3Q4VXF1 159 aa15.38■□□□□ 0.05
PDLIM7-207ENST00000486828 GPR157Q5UAW9 335 aa15.38■□□□□ 0.05
PDLIM7-207ENST00000486828 HAGHLQ6PII5 290 aaPredicted RBP15.38■□□□□ 0.05
PDLIM7-207ENST00000486828 OR4D5Q8NGN0 318 aa15.38■□□□□ 0.05
PDLIM7-207ENST00000486828 TMEM222Q9H0R3 208 aa15.38■□□□□ 0.05
PDLIM7-207ENST00000486828 TREM1Q9NP99 234 aa15.38■□□□□ 0.05
PDLIM7-207ENST00000486828 PLA2G2EQ9NZK7 142 aa15.38■□□□□ 0.05
PDLIM7-207ENST00000486828 SPRR3Q9UBC9 169 aa15.38■□□□□ 0.05
PDLIM7-207ENST00000486828 ARHGAP21Q5T5U3 1957 aa15.38■□□□□ 0.05
PDLIM7-207ENST00000486828 ZNF407Q9C0G0 2248 aa15.38■□□□□ 0.05
PDLIM7-207ENST00000486828 SLC22A20A6NK97 555 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 TRDCB7Z8K6 153 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 F8W036 122 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 GPR31O00270 319 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 ST8SIA3O43173 380 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 FBXO24O75426 580 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 GLAP06280 429 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 GNG3P63215 75 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 HERPUD1Q15011 391 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 TSC22D1Q15714 1073 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 ZNF766Q5HY98 468 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 MEX3BQ6ZN04 569 aaKnown RBP15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 ZNF573Q86YE8 665 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 PUSL1Q8N0Z8 303 aaKnown RBP15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 NEK7Q8TDX7 302 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 GTF3AQ92664 365 aaKnown RBP15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 ARV1Q9H2C2 271 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 RHOFQ9HBH0 211 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 SPACA1Q9HBV2 294 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 GP6Q9HCN6 339 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 PARP11Q9NR21 331 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 UQCC1Q9NVA1 299 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 FREM2Q5SZK8 3169 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 ARGFXA6NJG6 315 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 HSPB6O14558 160 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 LILRA1O75019 489 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 CTXN2P0C2S0 81 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 ARG2P78540 354 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 BTNL8Q6UX41 500 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 C5orf24Q7Z6I8 188 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 TBC1D26Q86UD7 250 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 MDP1Q86V88 176 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 ZNF565Q8N9K5 539 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 RIMS4Q9H426 269 aaPredicted RBP15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 ZDHHC8Q9ULC8 765 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 POMT1Q9Y6A1 747 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 ATP23Q9Y6H3 246 aa15.37■□□□□ 0.05
PDLIM7-207ENST00000486828 SHANK1Q9Y566 2161 aa15.36■□□□□ 0.05
PDLIM7-207ENST00000486828 SPAARA0A1B0GVQ0 90 aa15.36■□□□□ 0.05
PDLIM7-207ENST00000486828 TUSC2O75896 110 aa15.36■□□□□ 0.05
PDLIM7-207ENST00000486828 CDS2O95674 445 aa15.36■□□□□ 0.05
PDLIM7-207ENST00000486828 NOVA1P51513 510 aaKnown RBP15.36■□□□□ 0.05
PDLIM7-207ENST00000486828 IL24Q13007 206 aa15.36■□□□□ 0.05
PDLIM7-207ENST00000486828 ZNF169Q14929 603 aaPredicted RBP15.36■□□□□ 0.05
PDLIM7-207ENST00000486828 GUCA2BQ16661 112 aa15.36■□□□□ 0.05
PDLIM7-207ENST00000486828 RNFT1Q5M7Z0 435 aa15.36■□□□□ 0.05
PDLIM7-207ENST00000486828 SUMF2Q8NBJ7 301 aa15.36■□□□□ 0.05
PDLIM7-207ENST00000486828 SECTM1Q8WVN6 248 aa15.36■□□□□ 0.05
PDLIM7-207ENST00000486828 BSCL2Q96G97 398 aaPredicted RBP15.36■□□□□ 0.05
PDLIM7-207ENST00000486828 TMEM56Q96MV1 263 aa15.36■□□□□ 0.05
PDLIM7-207ENST00000486828 USB1Q9BQ65 265 aaKnown RBP15.36■□□□□ 0.05
PDLIM7-207ENST00000486828 TMEM231Q9H6L2 316 aa15.36■□□□□ 0.05
PDLIM7-207ENST00000486828 LHX6Q9UPM6 363 aa15.36■□□□□ 0.05
PDLIM7-207ENST00000486828 RCL1Q9Y2P8 373 aaKnown RBP15.36■□□□□ 0.05
PDLIM7-207ENST00000486828 TMEM56-RWDD3S4R434 201 aa15.36■□□□□ 0.05
PDLIM7-207ENST00000486828 BORCS7-ASMTA0A0B4J1R7 106 aa15.35■□□□□ 0.05
PDLIM7-207ENST00000486828 SPIN3Q5JUX0 258 aa15.35■□□□□ 0.05
PDLIM7-207ENST00000486828 CLEC9AQ6UXN8 241 aa15.35■□□□□ 0.05
PDLIM7-207ENST00000486828 ZNF818PQ6ZRF7 136 aa15.35■□□□□ 0.05
PDLIM7-207ENST00000486828 SPAG16Q8N0X2 631 aa15.35■□□□□ 0.05
PDLIM7-207ENST00000486828 TMEM178AQ8NBL3 297 aa15.35■□□□□ 0.05
PDLIM7-207ENST00000486828 DMBX1Q8NFW5 382 aa15.35■□□□□ 0.05
PDLIM7-207ENST00000486828 ZNF488Q96MN9 340 aa15.35■□□□□ 0.05
PDLIM7-207ENST00000486828 SEC11CQ9BY50 192 aa15.35■□□□□ 0.05
PDLIM7-207ENST00000486828 PKIBQ9C010 78 aa15.35■□□□□ 0.05
PDLIM7-207ENST00000486828 ZDHHC11Q9H8X9 412 aa15.35■□□□□ 0.05
PDLIM7-207ENST00000486828 UBE2J1Q9Y385 318 aaPredicted RBP15.35■□□□□ 0.05
PDLIM7-207ENST00000486828 ZNF175Q9Y473 711 aa15.35■□□□□ 0.05
PDLIM7-207ENST00000486828 SPTBN2O15020 2390 aa15.35■□□□□ 0.05
PDLIM7-207ENST00000486828 DNAJC13O75165 2243 aa15.35■□□□□ 0.05
PDLIM7-207ENST00000486828 TRBV6-6A0A0A6YYG2 114 aa15.35■□□□□ 0.05
PDLIM7-207ENST00000486828 IGKV1-6A0A0C4DH72 117 aa15.35■□□□□ 0.05
PDLIM7-207ENST00000486828 FTH1P19P0C7X4 201 aa15.35■□□□□ 0.05
PDLIM7-207ENST00000486828 MUC1P15941 1255 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms