RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 CLPXO76031 633 aa10.6□□□□□ -0.71
HDAC6-229ENST00000486665 IGHV2-5P01817 119 aa10.6□□□□□ -0.71
HDAC6-229ENST00000486665 TK1P04183 234 aa10.6□□□□□ -0.71
HDAC6-229ENST00000486665 RPS2P15880 293 aaKnown RBP10.6□□□□□ -0.71
HDAC6-229ENST00000486665 SLC25A16P16260 332 aa10.6□□□□□ -0.71
HDAC6-229ENST00000486665 GNB3P16520 340 aa10.6□□□□□ -0.71
HDAC6-229ENST00000486665 TNFSF8P32971 234 aa10.6□□□□□ -0.71
HDAC6-229ENST00000486665 PAN3Q58A45 887 aaKnown RBP10.6□□□□□ -0.71
HDAC6-229ENST00000486665 SLC36A1Q7Z2H8 476 aa10.6□□□□□ -0.71
HDAC6-229ENST00000486665 ASCC1Q8N9N2 400 aaKnown RBP10.6□□□□□ -0.71
HDAC6-229ENST00000486665 TMEM185AQ8NFB2 350 aa10.6□□□□□ -0.71
HDAC6-229ENST00000486665 RAB40AQ8WXH6 277 aa10.6□□□□□ -0.71
HDAC6-229ENST00000486665 DYRK2Q92630 601 aa10.6□□□□□ -0.71
HDAC6-229ENST00000486665 RAB3CQ96E17 227 aa10.6□□□□□ -0.71
HDAC6-229ENST00000486665 NEIL1Q96FI4 390 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-229ENST00000486665 NEDD4LQ96PU5 975 aa10.6□□□□□ -0.71
HDAC6-229ENST00000486665 PPA2Q9H2U2 334 aa10.6□□□□□ -0.71
HDAC6-229ENST00000486665 ZMAT3Q9HA38 289 aaKnown RBP10.6□□□□□ -0.71
HDAC6-229ENST00000486665 PTTG2Q9NZH5 202 aa10.6□□□□□ -0.71
HDAC6-229ENST00000486665 ELF5Q9UKW6 265 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-229ENST00000486665 KCNK7Q9Y2U2 307 aa10.6□□□□□ -0.71
HDAC6-229ENST00000486665 MCRIP1C9JLW8 97 aa10.59□□□□□ -0.71
HDAC6-229ENST00000486665 XRCC3O43542 346 aa10.59□□□□□ -0.71
HDAC6-229ENST00000486665 NDUFB3O43676 98 aa10.59□□□□□ -0.71
HDAC6-229ENST00000486665 USF1P22415 310 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-229ENST00000486665 GRK1Q15835 563 aa10.59□□□□□ -0.71
HDAC6-229ENST00000486665 FAM189A2Q15884 450 aa10.59□□□□□ -0.71
HDAC6-229ENST00000486665 ZNF260Q3ZCT1 412 aa10.59□□□□□ -0.71
HDAC6-229ENST00000486665 CDNFQ49AH0 187 aa10.59□□□□□ -0.71
HDAC6-229ENST00000486665 WDR25Q64LD2 544 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-229ENST00000486665 CNIH2Q6PI25 160 aa10.59□□□□□ -0.71
HDAC6-229ENST00000486665 OR8B3Q8NGG8 313 aa10.59□□□□□ -0.71
HDAC6-229ENST00000486665 PLPPR1Q8TBJ4 325 aa10.59□□□□□ -0.71
HDAC6-229ENST00000486665 OR8B2Q96RD0 313 aa10.59□□□□□ -0.71
HDAC6-229ENST00000486665 REG4Q9BYZ8 158 aa10.59□□□□□ -0.71
HDAC6-229ENST00000486665 SPACA1Q9HBV2 294 aa10.59□□□□□ -0.71
HDAC6-229ENST00000486665 DIABLOQ9NR28 239 aa10.59□□□□□ -0.71
HDAC6-229ENST00000486665 PLEKHJ1Q9NW61 149 aa10.59□□□□□ -0.71
HDAC6-229ENST00000486665 ING3Q9NXR8 418 aa10.59□□□□□ -0.71
HDAC6-229ENST00000486665 EXTL2Q9UBQ6 330 aa10.59□□□□□ -0.71
HDAC6-229ENST00000486665 SLC25A10Q9UBX3 287 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-229ENST00000486665 HSF4Q9ULV5 492 aa10.59□□□□□ -0.71
HDAC6-229ENST00000486665 ANK2Q01484 3957 aa10.59□□□□□ -0.71
HDAC6-229ENST00000486665 A0A0A6YYH2 397 aa10.58□□□□□ -0.72
HDAC6-229ENST00000486665 A6NJ64 397 aa10.58□□□□□ -0.72
HDAC6-229ENST00000486665 FAM157AC9JC47 383 aa10.58□□□□□ -0.72
HDAC6-229ENST00000486665 MFNGO00587 321 aa10.58□□□□□ -0.72
HDAC6-229ENST00000486665 PHF1O43189 567 aaPredicted RBP10.58□□□□□ -0.72
HDAC6-229ENST00000486665 HLA-DQB1P01920 261 aa10.58□□□□□ -0.72
HDAC6-229ENST00000486665 GLAP06280 429 aa10.58□□□□□ -0.72
HDAC6-229ENST00000486665 PTHLHP12272 177 aa10.58□□□□□ -0.72
HDAC6-229ENST00000486665 HIST1H1DP16402 221 aaKnown RBP10.58□□□□□ -0.72
HDAC6-229ENST00000486665 NDUFB7P17568 137 aa10.58□□□□□ -0.72
HDAC6-229ENST00000486665 ZFP36P26651 326 aaKnown RBP10.58□□□□□ -0.72
HDAC6-229ENST00000486665 TAS2R20P59543 309 aa10.58□□□□□ -0.72
HDAC6-229ENST00000486665 AESQ08117 197 aa10.58□□□□□ -0.72
HDAC6-229ENST00000486665 ATXN7L3Q14CW9 347 aaPredicted RBP10.58□□□□□ -0.72
HDAC6-229ENST00000486665 LRRC10Q5BKY1 277 aa10.58□□□□□ -0.72
HDAC6-229ENST00000486665 OR8H2Q8N162 312 aa10.58□□□□□ -0.72
HDAC6-229ENST00000486665 TPRX1Q8N7U7 411 aa10.58□□□□□ -0.72
HDAC6-229ENST00000486665 ST8SIA4Q92187 359 aa10.58□□□□□ -0.72
HDAC6-229ENST00000486665 COQ2Q96H96 371 aa10.58□□□□□ -0.72
HDAC6-229ENST00000486665 DIRAS2Q96HU8 199 aa10.58□□□□□ -0.72
HDAC6-229ENST00000486665 WDFY2Q96P53 400 aa10.58□□□□□ -0.72
HDAC6-229ENST00000486665 SOSTQ9BQB4 213 aa10.58□□□□□ -0.72
HDAC6-229ENST00000486665 NUDT16L1Q9BRJ7 211 aaKnown RBP10.58□□□□□ -0.72
HDAC6-229ENST00000486665 FAM234AQ9H0X4 552 aa10.58□□□□□ -0.72
HDAC6-229ENST00000486665 AK3Q9UIJ7 227 aa10.58□□□□□ -0.72
HDAC6-229ENST00000486665 ADAM30Q9UKF2 790 aa10.58□□□□□ -0.72
HDAC6-229ENST00000486665 MRPS7Q9Y2R9 242 aaKnown RBP10.58□□□□□ -0.72
HDAC6-229ENST00000486665 H3BUI4 141 aa10.57□□□□□ -0.72
HDAC6-229ENST00000486665 MGST3O14880 152 aa10.57□□□□□ -0.72
HDAC6-229ENST00000486665 SCGNO76038 276 aa10.57□□□□□ -0.72
HDAC6-229ENST00000486665 GLIPR1P48060 266 aa10.57□□□□□ -0.72
HDAC6-229ENST00000486665 LOXL1Q08397 574 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-229ENST00000486665 EDDM3AQ14507 147 aa10.57□□□□□ -0.72
HDAC6-229ENST00000486665 TMEM69Q5SWH9 247 aa10.57□□□□□ -0.72
HDAC6-229ENST00000486665 RSBN1Q5VWQ0 802 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-229ENST00000486665 NLRC3Q7RTR2 1065 aa10.57□□□□□ -0.72
HDAC6-229ENST00000486665 CCDC190Q86UF4 302 aa10.57□□□□□ -0.72
HDAC6-229ENST00000486665 OR5D13Q8NGL4 314 aa10.57□□□□□ -0.72
HDAC6-229ENST00000486665 PPP1R35Q8TAP8 253 aa10.57□□□□□ -0.72
HDAC6-229ENST00000486665 NEK7Q8TDX7 302 aa10.57□□□□□ -0.72
HDAC6-229ENST00000486665 PHF21AQ96BD5 680 aa10.57□□□□□ -0.72
HDAC6-229ENST00000486665 HDHD3Q9BSH5 251 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-229ENST00000486665 DCTN5Q9BTE1 182 aa10.57□□□□□ -0.72
HDAC6-229ENST00000486665 AUNIPQ9H7T9 357 aa10.57□□□□□ -0.72
HDAC6-229ENST00000486665 ETAA1Q9NY74 926 aa10.57□□□□□ -0.72
HDAC6-229ENST00000486665 CLN8Q9UBY8 286 aa10.57□□□□□ -0.72
HDAC6-229ENST00000486665 TRAV39A0A0B4J263 110 aa10.56□□□□□ -0.72
HDAC6-229ENST00000486665 A0A0G2JMP0 313 aa10.56□□□□□ -0.72
HDAC6-229ENST00000486665 A0A0X1KG70 313 aa10.56□□□□□ -0.72
HDAC6-229ENST00000486665 MEX3AA1L020 520 aaKnown RBP10.56□□□□□ -0.72
HDAC6-229ENST00000486665 TMEM235A6NFC5 223 aa10.56□□□□□ -0.72
HDAC6-229ENST00000486665 MT-ND4P03905 459 aa10.56□□□□□ -0.72
HDAC6-229ENST00000486665 CSN2P05814 226 aa10.56□□□□□ -0.72
HDAC6-229ENST00000486665 MELTFP08582 738 aa10.56□□□□□ -0.72
HDAC6-229ENST00000486665 GSTP1P09211 210 aaKnown RBP10.56□□□□□ -0.72
HDAC6-229ENST00000486665 S100A5P33763 92 aa10.56□□□□□ -0.72
HDAC6-229ENST00000486665 GNB2P62879 340 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms