RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 MRPL22Q9NWU5 206 aaKnown RBP9.65□□□□□ -0.87
HDAC6-228ENST00000486227 C16orf97H3BN30 126 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 RECKO95980 971 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 VSIG8P0DPA2 414 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 KITLGP21583 273 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 GPR12P47775 334 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 CCL17Q92583 94 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 ZMIZ1Q9ULJ6 1067 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 COL4A6Q14031 1691 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 CLDN34H7C241 214 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 SSSCA1O60232 199 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 ADRA2AP08913 450 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 MUC1P15941 1255 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-228ENST00000486227 MPGP29372 298 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 BTCP35070 178 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 PPP1CBP62140 327 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 DHODHQ02127 395 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 TESK1Q15569 626 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 DHRS7BQ6IAN0 325 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-228ENST00000486227 Q8IYB0 196 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 TMEM251Q8N6I4 163 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 IL17BQ9UHF5 180 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 TRGV10A0A0A0MS01 117 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 DAOP14920 347 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 HOXA6P31267 233 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 TMEM33P57088 247 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 HIKESHIQ53FT3 197 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 SPANXN5Q5MJ07 72 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 LINC01590Q5TEZ4 76 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 NTNG2Q96CW9 530 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 HEXA-AS1Q9H8Q6 139 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 TTC28Q96AY4 2481 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 MDFIC2A0A1B0GVS7 189 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 K7ESF4 209 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 ADAM11O75078 769 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 TNFAIP6P98066 277 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-228ENST00000486227 SLC35G3Q8N808 338 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 ZNF383Q8NA42 475 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 SSUH2Q9Y2M2 353 aa9.64□□□□□ -0.87
HDAC6-228ENST00000486227 CST9LP1Q5W188 147 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 ATRAIDQ6UW56 229 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 LCN15Q6UWW0 184 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 RFESDQ8TAC1 157 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 EDARADDQ8WWZ3 215 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 FAM210BQ96KR6 192 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 PIPOXQ9P0Z9 390 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 LY86O95711 162 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 METTL15P1P0C7V9 234 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 PGA4P0DJD7 388 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 PGA3P0DJD8 388 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 RAB4AP20338 218 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 FAM27BQ5VT28 67 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 ZNF787Q6DD87 383 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 CLEC18BQ6UXF7 455 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 RPS4Y2Q8TD47 263 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 PECRQ9BY49 303 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 LAMP3Q9UQV4 416 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 V9GYS6 101 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 TCF20Q9UGU0 1960 aaKnown RBP9.63□□□□□ -0.87
HDAC6-228ENST00000486227 CSRP1P21291 193 aaKnown RBP9.63□□□□□ -0.87
HDAC6-228ENST00000486227 LIMK1P53667 647 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 PMP22Q01453 160 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 ROM1Q03395 351 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 IQCJQ1A5X6 159 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 BAGE3Q86Y29 109 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 BAGE2Q86Y30 109 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 ZNF441Q8N8Z8 693 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 GALMQ96C23 342 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 GMPPAQ96IJ6 420 aaPredicted RBP9.63□□□□□ -0.87
HDAC6-228ENST00000486227 SMIM7Q9BQ49 75 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 KCNK7Q9Y2U2 307 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 A0A0G2JK05 382 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 NGFP01138 241 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 G0S2P27469 103 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 NSUN5P2Q63ZY6 315 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 NCR3LG1Q68D85 454 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 SSX8Q7RTT4 187 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 SHISA5Q8N114 240 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 WDR13Q9H1Z4 485 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 SLC7A10Q9NS82 523 aa9.63□□□□□ -0.87
HDAC6-228ENST00000486227 RCL1Q9Y2P8 373 aaKnown RBP9.63□□□□□ -0.87
HDAC6-228ENST00000486227 TMEM229AB2RXF0 380 aa9.62□□□□□ -0.87
HDAC6-228ENST00000486227 PIN1P1O15428 100 aa9.62□□□□□ -0.87
HDAC6-228ENST00000486227 ZNHIT1O43257 154 aa9.62□□□□□ -0.87
HDAC6-228ENST00000486227 RTL8BQ17RB0 113 aa9.62□□□□□ -0.87
HDAC6-228ENST00000486227 CDCP2Q5VXM1 449 aa9.62□□□□□ -0.87
HDAC6-228ENST00000486227 UNQ9370/PRO34162Q6UXP9 181 aa9.62□□□□□ -0.87
HDAC6-228ENST00000486227 TAAR3PQ9P1P4 343 aa9.62□□□□□ -0.87
HDAC6-228ENST00000486227 ERRFI1Q9UJM3 462 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-228ENST00000486227 IAPPP10997 89 aa9.62□□□□□ -0.87
HDAC6-228ENST00000486227 SRP14P37108 136 aaKnown RBP9.62□□□□□ -0.87
HDAC6-228ENST00000486227 PKIAP61925 76 aa9.62□□□□□ -0.87
HDAC6-228ENST00000486227 RPS4XP62701 263 aaKnown RBP9.62□□□□□ -0.87
HDAC6-228ENST00000486227 C1orf185Q5T7R7 199 aa9.62□□□□□ -0.87
HDAC6-228ENST00000486227 ZNF519Q8TB69 540 aa9.62□□□□□ -0.87
HDAC6-228ENST00000486227 MS4A3Q96HJ5 214 aa9.62□□□□□ -0.87
HDAC6-228ENST00000486227 OR51I2Q9H344 312 aa9.62□□□□□ -0.87
HDAC6-228ENST00000486227 LIN7CQ9NUP9 197 aaKnown RBP9.62□□□□□ -0.87
HDAC6-228ENST00000486227 VSIG4Q9Y279 399 aa9.62□□□□□ -0.87
HDAC6-228ENST00000486227 NBASA2RRP1 2371 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 185.9 ms