RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 POU2AF1Q16633 256 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 LIN52Q52LA3 116 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 KLHL12Q53G59 568 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 ELFN2Q5R3F8 820 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 FAM19A1Q7Z5A9 133 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 LGI3Q8N145 548 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 ZNF433Q8N7K0 673 aaPredicted RBP4.43□□□□□ -1.7
CCDC39-205ENST00000485055 OR52H1Q8NGJ2 320 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 OR51A7Q8NH64 312 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 MFSD8Q8NHS3 518 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 SLC7A13Q8TCU3 470 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 SMIM19Q96E16 107 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 Q96MF0 132 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 KCTD7Q96MP8 289 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 DPY30Q9C005 99 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 TLNRD1Q9H1K6 362 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 TAS2R1Q9NYW7 299 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 ZNF319Q9P2F9 582 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 PURGQ9UJV8 347 aaKnown RBP4.43□□□□□ -1.7
CCDC39-205ENST00000485055 UFC1Q9Y3C8 167 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 INTS1Q8N201 2190 aaKnown RBP4.43□□□□□ -1.7
CCDC39-205ENST00000485055 YLPM1P49750 1951 aaKnown RBP4.43□□□□□ -1.7
CCDC39-205ENST00000485055 A0A1W2PPR1 153 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 TMEM178BH3BS89 294 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 RRHO14718 337 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 IGLV1-44P01699 117 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 CSF3P09919 207 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 LIMS3P0CW19 117 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 LIMS4P0CW20 117 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 HIST1H1EP10412 219 aaKnown RBP4.43□□□□□ -1.7
CCDC39-205ENST00000485055 IL12AP29459 219 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 EVX1P49640 407 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 CLDN17P56750 224 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 GGTLC2Q14390 218 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 QPRTQ15274 297 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 ZNF672Q499Z4 452 aaPredicted RBP4.43□□□□□ -1.7
CCDC39-205ENST00000485055 ASPHD1Q5U4P2 390 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 CHMP1BQ7LBR1 199 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 ZNF550Q7Z398 422 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 ATG4DQ86TL0 474 aaPredicted RBP4.43□□□□□ -1.7
CCDC39-205ENST00000485055 OR8J3Q8NGG0 315 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 OR5L1Q8NGL2 311 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 OR5R1Q8NH85 324 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 OR5AK3PQ8NH89 298 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 SFRP2Q96HF1 295 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 TRAF4Q9BUZ4 470 aaPredicted RBP4.43□□□□□ -1.7
CCDC39-205ENST00000485055 SRXN1Q9BYN0 137 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 OR51I1Q9H343 314 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 GLTPQ9NZD2 209 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 KCNE3Q9Y6H6 103 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 SPTA1P02549 2419 aa4.43□□□□□ -1.7
CCDC39-205ENST00000485055 HEATR5AQ86XA9 2040 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 TRBV5-7A0A0A0MS05 114 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 A0A1B0GTI1 187 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 OIP5O43482 229 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 SPRY3O43610 288 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 BCHEP06276 602 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 S100A3P33764 101 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 SFTPDP35247 375 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 LEPP41159 167 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 FOXF1Q12946 379 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 GAGE1Q13065 139 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 PTGR1Q14914 329 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 MAPK14Q16539 360 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 NRF1Q16656 503 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 TBC1D28Q2M2D7 210 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 SNAI3Q3KNW1 292 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 OGFRL1Q5TC84 451 aaPredicted RBP4.42□□□□□ -1.7
CCDC39-205ENST00000485055 Q6ZWC4 215 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 PEG10Q86TG7 708 aaKnown RBP4.42□□□□□ -1.7
CCDC39-205ENST00000485055 C11orf45Q8TAV5 145 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 ABHD3Q8WU67 409 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 ZNF524Q96C55 264 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 DDIT4LQ96D03 193 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 TMEM19Q96HH6 336 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 OR5B12Q96R08 314 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 OR14A2Q96R54 314 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 C2orf88Q9BSF0 95 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 MED18Q9BUE0 208 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 PECRQ9BY49 303 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 WFDC1Q9HC57 220 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 PRELID3BQ9Y3B1 194 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 SLC25A15Q9Y619 301 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 DNAJC13O75165 2243 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 DHRS7CA6NNS2 312 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 RP2O75695 350 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 GTF2F2P13984 249 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 SERPINA2P20848 420 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 CBLP22681 906 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 GLIPR1P48060 266 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 PDLIM4P50479 330 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 CFHR3Q02985 330 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 PTGES3Q15185 160 aaKnown RBP4.42□□□□□ -1.7
CCDC39-205ENST00000485055 LRRC37A5PQ49AS3 106 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 FBXW9Q5XUX1 488 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 OR4A47Q6IF82 309 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 KRTCAP2Q8N6L1 136 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 WDR31Q8NA23 367 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 NUP37Q8NFH4 326 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 FNDC9Q8TBE3 224 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms