RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 FOXB2Q5VYV0 432 aa9.13□□□□□ -0.95
SCFD1-206ENST00000484733 ZNF529Q6P280 563 aa9.13□□□□□ -0.95
SCFD1-206ENST00000484733 ZFP1Q6P2D0 407 aa9.13□□□□□ -0.95
SCFD1-206ENST00000484733 SLC16A12Q6ZSM3 486 aa9.13□□□□□ -0.95
SCFD1-206ENST00000484733 OR10A7Q8NGE5 316 aa9.13□□□□□ -0.95
SCFD1-206ENST00000484733 OR9G1Q8NH87 305 aa9.13□□□□□ -0.95
SCFD1-206ENST00000484733 PYDC1Q8WXC3 89 aa9.13□□□□□ -0.95
SCFD1-206ENST00000484733 CPNE2Q96FN4 548 aaPredicted RBP9.13□□□□□ -0.95
SCFD1-206ENST00000484733 Q96MT0 163 aa9.13□□□□□ -0.95
SCFD1-206ENST00000484733 AMMECR1Q9Y4X0 333 aaPredicted RBP9.13□□□□□ -0.95
SCFD1-206ENST00000484733 CD24P25063 80 aa9.13□□□□□ -0.95
SCFD1-206ENST00000484733 KCNJ3P48549 501 aa9.13□□□□□ -0.95
SCFD1-206ENST00000484733 SCN1BQ07699 218 aa9.13□□□□□ -0.95
SCFD1-206ENST00000484733 ABCA11PQ4W5N1 156 aa9.13□□□□□ -0.95
SCFD1-206ENST00000484733 ASCL4Q6XD76 172 aa9.13□□□□□ -0.95
SCFD1-206ENST00000484733 OR4X2Q8NGF9 303 aa9.13□□□□□ -0.95
SCFD1-206ENST00000484733 OR5D18Q8NGL1 313 aa9.13□□□□□ -0.95
SCFD1-206ENST00000484733 OR5AK2Q8NH90 309 aa9.13□□□□□ -0.95
SCFD1-206ENST00000484733 RHOXF1Q8NHV9 184 aa9.13□□□□□ -0.95
SCFD1-206ENST00000484733 MYDGFQ969H8 173 aa9.13□□□□□ -0.95
SCFD1-206ENST00000484733 KIRREL1Q96J84 757 aa9.13□□□□□ -0.95
SCFD1-206ENST00000484733 PPIL3Q9H2H8 161 aaKnown RBP9.13□□□□□ -0.95
SCFD1-206ENST00000484733 GMPPBQ9Y5P6 360 aa9.13□□□□□ -0.95
SCFD1-206ENST00000484733 ZFPL1O95159 310 aa9.12□□□□□ -0.95
SCFD1-206ENST00000484733 DUS4LO95620 317 aaKnown RBP9.12□□□□□ -0.95
SCFD1-206ENST00000484733 FADS2O95864 444 aaKnown RBP9.12□□□□□ -0.95
SCFD1-206ENST00000484733 LPLP06858 475 aa9.12□□□□□ -0.95
SCFD1-206ENST00000484733 HCKP08631 526 aa9.12□□□□□ -0.95
SCFD1-206ENST00000484733 FAM106CPP0CH98 169 aa9.12□□□□□ -0.95
SCFD1-206ENST00000484733 PF4V1P10720 104 aa9.12□□□□□ -0.95
SCFD1-206ENST00000484733 IGLL1P15814 213 aa9.12□□□□□ -0.95
SCFD1-206ENST00000484733 RAB40BQ12829 278 aa9.12□□□□□ -0.95
SCFD1-206ENST00000484733 ZIK1Q3SY52 487 aaPredicted RBP9.12□□□□□ -0.95
SCFD1-206ENST00000484733 LHFPL3Q86UP9 236 aa9.12□□□□□ -0.95
SCFD1-206ENST00000484733 ZNF565Q8N9K5 539 aa9.12□□□□□ -0.95
SCFD1-206ENST00000484733 ISG20L2Q9H9L3 353 aaKnown RBP9.12□□□□□ -0.95
SCFD1-206ENST00000484733 ERVK13-1Q9NX77 482 aa9.12□□□□□ -0.95
SCFD1-206ENST00000484733 IDI2-AS1Q9NZ38 188 aa9.12□□□□□ -0.95
SCFD1-206ENST00000484733 DHDHQ9UQ10 334 aa9.12□□□□□ -0.95
SCFD1-206ENST00000484733 NPIPB11E5RHQ5 1161 aa9.11□□□□□ -0.95
SCFD1-206ENST00000484733 J3QR06 171 aa9.11□□□□□ -0.95
SCFD1-206ENST00000484733 C21orf33P30042 268 aaPredicted RBP9.11□□□□□ -0.95
SCFD1-206ENST00000484733 GBX2P52951 348 aaPredicted RBP9.11□□□□□ -0.95
SCFD1-206ENST00000484733 SLC35A2P78381 396 aa9.11□□□□□ -0.95
SCFD1-206ENST00000484733 ATXN7L3Q14CW9 347 aaPredicted RBP9.11□□□□□ -0.95
SCFD1-206ENST00000484733 C10orf67Q8IYJ2 551 aa9.11□□□□□ -0.95
SCFD1-206ENST00000484733 OSR2Q8N2R0 312 aa9.11□□□□□ -0.95
SCFD1-206ENST00000484733 CNIH3Q8TBE1 160 aa9.11□□□□□ -0.95
SCFD1-206ENST00000484733 RCC1LQ96I51 464 aaKnown RBP9.11□□□□□ -0.95
SCFD1-206ENST00000484733 JAM3Q9BX67 310 aa9.11□□□□□ -0.95
SCFD1-206ENST00000484733 BARHL1Q9BZE3 327 aa9.11□□□□□ -0.95
SCFD1-206ENST00000484733 CALYQ9NYX4 217 aa9.11□□□□□ -0.95
SCFD1-206ENST00000484733 MOB4Q9Y3A3 225 aa9.11□□□□□ -0.95
SCFD1-206ENST00000484733 HSPE1-MOB4S4R3N1 261 aa9.11□□□□□ -0.95
SCFD1-206ENST00000484733 TRAV24A0A0B4J272 114 aa9.11□□□□□ -0.95
SCFD1-206ENST00000484733 A0A1W2PRX2 142 aa9.11□□□□□ -0.95
SCFD1-206ENST00000484733 FAM172BPA6NC97 362 aa9.11□□□□□ -0.95
SCFD1-206ENST00000484733 H0YJX3 145 aa9.11□□□□□ -0.95
SCFD1-206ENST00000484733 IL1AP01583 271 aa9.11□□□□□ -0.95
SCFD1-206ENST00000484733 RAB3AP20336 220 aa9.11□□□□□ -0.95
SCFD1-206ENST00000484733 OR3A4PP47883 348 aa9.11□□□□□ -0.95
SCFD1-206ENST00000484733 RSBN1Q5VWQ0 802 aaPredicted RBP9.11□□□□□ -0.95
SCFD1-206ENST00000484733 CCDC121Q6ZUS5 278 aa9.11□□□□□ -0.95
SCFD1-206ENST00000484733 CBR4Q8N4T8 237 aa9.11□□□□□ -0.95
SCFD1-206ENST00000484733 IFT22Q9H7X7 185 aa9.11□□□□□ -0.95
SCFD1-206ENST00000484733 AASSQ9UDR5 926 aa9.11□□□□□ -0.95
SCFD1-206ENST00000484733 E9PI62 339 aa9.1□□□□□ -0.95
SCFD1-206ENST00000484733 GABRPO00591 440 aa9.1□□□□□ -0.95
SCFD1-206ENST00000484733 PF4P02776 101 aa9.1□□□□□ -0.95
SCFD1-206ENST00000484733 RAB7AP51149 207 aa9.1□□□□□ -0.95
SCFD1-206ENST00000484733 KLHL22Q53GT1 634 aa9.1□□□□□ -0.95
SCFD1-206ENST00000484733 PAN3Q58A45 887 aaKnown RBP9.1□□□□□ -0.95
SCFD1-206ENST00000484733 UTF1Q5T230 341 aa9.1□□□□□ -0.95
SCFD1-206ENST00000484733 OR8H3Q8N146 312 aa9.1□□□□□ -0.95
SCFD1-206ENST00000484733 OR52I1Q8NGK6 324 aa9.1□□□□□ -0.95
SCFD1-206ENST00000484733 OR13A1Q8NGR1 328 aa9.1□□□□□ -0.95
SCFD1-206ENST00000484733 TOMM40LQ969M1 308 aa9.1□□□□□ -0.95
SCFD1-206ENST00000484733 RPEQ96AT9 228 aa9.1□□□□□ -0.95
SCFD1-206ENST00000484733 C9orf16Q9BUW7 83 aa9.1□□□□□ -0.95
SCFD1-206ENST00000484733 KIF25Q9UIL4 384 aa9.1□□□□□ -0.95
SCFD1-206ENST00000484733 RPL36Q9Y3U8 105 aaKnown RBP9.1□□□□□ -0.95
SCFD1-206ENST00000484733 KIAA2026Q5HYC2 2103 aa9.1□□□□□ -0.95
SCFD1-206ENST00000484733 MAGEB3O15480 346 aa9.1□□□□□ -0.95
SCFD1-206ENST00000484733 FGF16O43320 207 aa9.1□□□□□ -0.95
SCFD1-206ENST00000484733 NFYBP25208 207 aa9.1□□□□□ -0.95
SCFD1-206ENST00000484733 NHLRC3Q5JS37 347 aa9.1□□□□□ -0.95
SCFD1-206ENST00000484733 LPCAT4Q643R3 524 aa9.1□□□□□ -0.95
SCFD1-206ENST00000484733 TSEN15Q8WW01 171 aaKnown RBP9.1□□□□□ -0.95
SCFD1-206ENST00000484733 PDCD1LG2Q9BQ51 273 aa9.1□□□□□ -0.95
SCFD1-206ENST00000484733 GPR61Q9BZJ8 451 aa9.1□□□□□ -0.95
SCFD1-206ENST00000484733 FGF20Q9NP95 211 aaPredicted RBP9.1□□□□□ -0.95
SCFD1-206ENST00000484733 IL36GQ9NZH8 169 aa9.1□□□□□ -0.95
SCFD1-206ENST00000484733 MEIKINA0A087WXM9 373 aa9.09□□□□□ -0.95
SCFD1-206ENST00000484733 A0A1W2PPI3 338 aa9.09□□□□□ -0.95
SCFD1-206ENST00000484733 CLIC3O95833 236 aa9.09□□□□□ -0.95
SCFD1-206ENST00000484733 GLP1RP43220 463 aa9.09□□□□□ -0.95
SCFD1-206ENST00000484733 CCDC58Q4VC31 144 aa9.09□□□□□ -0.95
SCFD1-206ENST00000484733 PLPPR1Q8TBJ4 325 aa9.09□□□□□ -0.95
SCFD1-206ENST00000484733 TNFAIP8L1Q8WVP5 186 aa9.09□□□□□ -0.95
SCFD1-206ENST00000484733 NR1H4Q96RI1 486 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms