RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 CASP12Q6UXS9 341 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 C19orf35Q6ZS72 473 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 TMPPEQ6ZT21 453 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 SLC25A48Q6ZT89 311 aaKnown RBP1.47□□□□□ -2.17
ITGB1-213ENST00000484088 HIST2H3AQ71DI3 136 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 SLC30A8Q8IWU4 369 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 BAP18Q8IXM2 172 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 CPNE9Q8IYJ1 553 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 C4orf33Q8N1A6 199 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 LRRC25Q8N386 305 aaPredicted RBP1.47□□□□□ -2.17
ITGB1-213ENST00000484088 PNKDQ8N490 385 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 PACRGLQ8N7B6 248 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 LRRC52Q8N7C0 313 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 ZNF557Q8N988 423 aaPredicted RBP1.47□□□□□ -2.17
ITGB1-213ENST00000484088 ACOT4Q8N9L9 421 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 LINC01555Q8NAE3 123 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 ZNF740Q8NDX6 193 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 SLC26A10Q8NG04 563 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 OR4P4Q8NGL7 312 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 OR1L6Q8NGR2 347 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 OR2Y1Q8NGV0 311 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 SYNPRQ8TBG9 265 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 ZFP90Q8TF47 636 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 Q8WTZ3 238 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 ORAOV1Q8WV07 137 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 CANT1Q8WVQ1 401 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 TFGQ92734 400 aaPredicted RBP1.47□□□□□ -2.17
ITGB1-213ENST00000484088 ARPC1AQ92747 370 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 RDH5Q92781 318 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 GHSRQ92847 366 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 FAM104AQ969W3 186 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 TMEM159Q96B96 161 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 ELSPBP1Q96BH3 223 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 WDR34Q96EX3 536 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 CPNE2Q96FN4 548 aaPredicted RBP1.47□□□□□ -2.17
ITGB1-213ENST00000484088 MRAP2Q96G30 205 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 AURKBQ96GD4 344 aaPredicted RBP1.47□□□□□ -2.17
ITGB1-213ENST00000484088 PYURFQ96I23 114 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 FCRL1Q96LA6 429 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 ZNF75AQ96N20 296 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 RBP7Q96R05 134 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 OR7D2Q96RA2 312 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 OR8B4Q96RC9 309 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 ZNF382Q96SR6 550 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 MBOAT4Q96T53 435 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 CNN2Q99439 309 aaKnown RBP1.47□□□□□ -2.17
ITGB1-213ENST00000484088 FMO2Q99518 471 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 SIGMAR1Q99720 223 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 SULT4A1Q9BR01 284 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 LXNQ9BS40 222 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 FAAP24Q9BTP7 215 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 PBDC1Q9BVG4 233 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 SUCNR1Q9BXA5 334 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 SPANXDQ9BXN6 97 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 MS4A8Q9BY19 250 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 PECRQ9BY49 303 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 ACTR3CQ9C0K3 210 aaPredicted RBP1.47□□□□□ -2.17
ITGB1-213ENST00000484088 TMEM126AQ9H061 195 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 DCSTAMPQ9H295 470 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 UBE2ZQ9H832 354 aaPredicted RBP1.47□□□□□ -2.17
ITGB1-213ENST00000484088 PATZ1Q9HBE1 687 aaKnown RBP1.47□□□□□ -2.17
ITGB1-213ENST00000484088 RDH14Q9HBH5 336 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 NMRAL1Q9HBL8 299 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 EXOSC4Q9NPD3 245 aaKnown RBP1.47□□□□□ -2.17
ITGB1-213ENST00000484088 CCL28Q9NRJ3 127 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 AIG1Q9NVV5 245 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 FAM206AQ9NX38 181 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 MED29Q9NX70 200 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 SCN3BQ9NY72 215 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 DOK5Q9P104 306 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 OPTCQ9UBM4 332 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 METTL1Q9UBP6 276 aaKnown RBP1.47□□□□□ -2.17
ITGB1-213ENST00000484088 RPS6KB2Q9UBS0 482 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 NEU3Q9UQ49 428 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 ZFP30Q9Y2G7 519 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 SIGLEC9Q9Y336 463 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 UFC1Q9Y3C8 167 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 HSPE1-MOB4S4R3N1 261 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 IFT140Q96RY7 1462 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 COL4A4P53420 1690 aaPredicted RBP1.47□□□□□ -2.17
ITGB1-213ENST00000484088 BCL9O00512 1426 aa1.47□□□□□ -2.17
ITGB1-213ENST00000484088 MAGI1Q96QZ7 1491 aaPredicted RBP1.46□□□□□ -2.18
ITGB1-213ENST00000484088 SCAF11Q99590 1463 aaKnown RBP1.46□□□□□ -2.18
ITGB1-213ENST00000484088 NSG1A0A0A6YYJ2 146 aa1.46□□□□□ -2.18
ITGB1-213ENST00000484088 GLYATL1P3A0A0U1RQE8 302 aa1.46□□□□□ -2.18
ITGB1-213ENST00000484088 A0A1B0GV50 99 aa1.46□□□□□ -2.18
ITGB1-213ENST00000484088 TMEM218A2RU14 115 aa1.46□□□□□ -2.18
ITGB1-213ENST00000484088 MAP1LC3B2A6NCE7 125 aa1.46□□□□□ -2.18
ITGB1-213ENST00000484088 SMIM9A6NGZ8 99 aa1.46□□□□□ -2.18
ITGB1-213ENST00000484088 OR5H14A6NHG9 310 aa1.46□□□□□ -2.18
ITGB1-213ENST00000484088 HACD1B0YJ81 288 aa1.46□□□□□ -2.18
ITGB1-213ENST00000484088 CLDN25C9JDP6 229 aa1.46□□□□□ -2.18
ITGB1-213ENST00000484088 F5H5T6 163 aa1.46□□□□□ -2.18
ITGB1-213ENST00000484088 H7C417 338 aa1.46□□□□□ -2.18
ITGB1-213ENST00000484088 PLPP1O14494 284 aa1.46□□□□□ -2.18
ITGB1-213ENST00000484088 DEGS1O15121 323 aa1.46□□□□□ -2.18
ITGB1-213ENST00000484088 FABP7O15540 132 aa1.46□□□□□ -2.18
ITGB1-213ENST00000484088 TCF21O43680 179 aa1.46□□□□□ -2.18
ITGB1-213ENST00000484088 ENSAO43768 121 aaKnown RBP1.46□□□□□ -2.18
ITGB1-213ENST00000484088 MFSD11O43934 449 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms