RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 PRSS12P56730 875 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 SELENOVP59797 346 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 RAP2BP61225 183 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 SEC61A1P61619 476 aaKnown RBP4.59□□□□□ -1.67
COL17A1-206ENST00000483876 TSPAN5P62079 268 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 RPS23P62266 143 aaKnown RBP4.59□□□□□ -1.67
COL17A1-206ENST00000483876 NKX6-1P78426 367 aaPredicted RBP4.59□□□□□ -1.67
COL17A1-206ENST00000483876 CD83Q01151 205 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 DEFA6Q01524 100 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 KIR2DS1Q14954 304 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 DAZAP2Q15038 168 aaPredicted RBP4.59□□□□□ -1.67
COL17A1-206ENST00000483876 OR8G1Q15617 311 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 TSC22D1Q15714 1073 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 DEFB113Q30KQ7 82 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 FBXL19-AS1Q494R0 122 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 SCGB2B2Q4G0G5 96 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 C4orf46Q504U0 113 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 TMEM128Q5BJH2 165 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 ZNF660Q6AZW8 331 aaPredicted RBP4.59□□□□□ -1.67
COL17A1-206ENST00000483876 OR52W1Q6IF63 320 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 LPCAT3Q6P1A2 487 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 C11orf88Q6PI97 169 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 HAGHLQ6PII5 290 aaPredicted RBP4.59□□□□□ -1.67
COL17A1-206ENST00000483876 FAM90A1Q86YD7 464 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 GAPTQ8N292 157 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 MUC20Q8N307 709 aaPredicted RBP4.59□□□□□ -1.67
COL17A1-206ENST00000483876 RPRMLQ8N4K4 120 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 C12orf45Q8N5I9 185 aaPredicted RBP4.59□□□□□ -1.67
COL17A1-206ENST00000483876 SCCPDHQ8NBX0 429 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 NUP37Q8NFH4 326 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 OR10Z1Q8NGY1 313 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 LILRB1Q8NHL6 650 aaPredicted RBP4.59□□□□□ -1.67
COL17A1-206ENST00000483876 MITD1Q8WV92 249 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 RND1Q92730 232 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 SLAMF9Q96A28 289 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 DMRTA2Q96SC8 542 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 NRIP2Q9BQI9 281 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 SULT4A1Q9BR01 284 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 C1QTNF6Q9BXI9 259 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 GON7Q9BXV9 100 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 TMPRSS13Q9BYE2 586 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 HES4Q9HCC6 221 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 C12orf4Q9NQ89 552 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 NECAP2Q9NVZ3 263 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 SLC23A1Q9UHI7 598 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 GLS2Q9UI32 602 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 AK3Q9UIJ7 227 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 POU2F3Q9UKI9 436 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 MGAT4AQ9UM21 535 aa4.59□□□□□ -1.67
COL17A1-206ENST00000483876 INTS1Q8N201 2190 aaKnown RBP4.58□□□□□ -1.68
COL17A1-206ENST00000483876 C9orf170A2RU37 121 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 DBX1A6NMT0 343 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 OR2AT4A6NND4 320 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 SH2D1BO14796 132 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 RGS13O14921 159 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 DEGS1O15121 323 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 FABP7O15540 132 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 SYNGR1O43759 233 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 LILRA1O75019 489 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 OR7C1O76099 320 aaPredicted RBP4.58□□□□□ -1.68
COL17A1-206ENST00000483876 DUS4LO95620 317 aaKnown RBP4.58□□□□□ -1.68
COL17A1-206ENST00000483876 PLATP00750 562 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 CTSDP07339 412 aaPredicted RBP4.58□□□□□ -1.68
COL17A1-206ENST00000483876 FCGR3AP08637 254 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 OR5H8P0DN80 308 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 CXCL3P19876 107 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 BMP5P22003 454 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 FPR2P25090 351 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 CD40P25942 277 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 MPV17P39210 176 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 CD200P41217 278 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 KCNJ3P48549 501 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 FABP6P51161 128 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 ARPC4P59998 168 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 IL13RA1P78552 427 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 CYCSP99999 105 aaKnown RBP4.58□□□□□ -1.68
COL17A1-206ENST00000483876 PAX5Q02548 391 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 FAM27E3Q08E93 113 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 ZNF154Q13106 437 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 DHRS2Q13268 280 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 NKPD1Q17RQ9 610 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 PIGYQ3MUY2 71 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 NKAPLQ5M9Q1 402 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 SPATA46Q5T0L3 261 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 AADACL3Q5VUY0 350 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 RGS7BPQ6MZT1 257 aaPredicted RBP4.58□□□□□ -1.68
COL17A1-206ENST00000483876 Q6P435 159 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 ZNF880Q6PDB4 577 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 FIP1L1Q6UN15 594 aaKnown RBP4.58□□□□□ -1.68
COL17A1-206ENST00000483876 TMEM108Q6UXF1 575 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 NLRC3Q7RTR2 1065 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 LYG2Q86SG7 212 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 C11orf53Q8IXP5 236 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 POC1AQ8NBT0 407 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 BHLHE23Q8NDY6 225 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 OR2AK2Q8NG84 335 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 ZFAND1Q8TCF1 268 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 ERGIC1Q969X5 290 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 MRGPRFQ96AM1 343 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 PIK3IP1Q96FE7 263 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms