RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 ZNF546Q86UE3 836 aa11.21□□□□□ -0.61
CPNE1-225ENST00000483495 SNRNP40Q96DI7 357 aaKnown RBP11.21□□□□□ -0.61
CPNE1-225ENST00000483495 USB1Q9BQ65 265 aaKnown RBP11.21□□□□□ -0.61
CPNE1-225ENST00000483495 NAA60Q9H7X0 242 aa11.21□□□□□ -0.61
CPNE1-225ENST00000483495 PRR13Q9NZ81 148 aa11.21□□□□□ -0.61
CPNE1-225ENST00000483495 Q9UFV3 132 aa11.21□□□□□ -0.61
CPNE1-225ENST00000483495 TNFSF18Q9UNG2 199 aa11.21□□□□□ -0.61
CPNE1-225ENST00000483495 ACACAQ13085 2346 aa11.21□□□□□ -0.61
CPNE1-225ENST00000483495 TEX13DA0A0J9YY54 714 aaPredicted RBP11.21□□□□□ -0.62
CPNE1-225ENST00000483495 M0R1B8 84 aa11.21□□□□□ -0.62
CPNE1-225ENST00000483495 ADAP1O75689 374 aa11.21□□□□□ -0.62
CPNE1-225ENST00000483495 TUSC2O75896 110 aa11.21□□□□□ -0.62
CPNE1-225ENST00000483495 CFDP00746 253 aaPredicted RBP11.21□□□□□ -0.62
CPNE1-225ENST00000483495 TK1P04183 234 aa11.21□□□□□ -0.62
CPNE1-225ENST00000483495 BMP5P22003 454 aa11.21□□□□□ -0.62
CPNE1-225ENST00000483495 PSMB6P28072 239 aa11.21□□□□□ -0.62
CPNE1-225ENST00000483495 GLRXP35754 106 aa11.21□□□□□ -0.62
CPNE1-225ENST00000483495 RBMXP38159 391 aaKnown RBP11.21□□□□□ -0.62
CPNE1-225ENST00000483495 KCNJ3P48549 501 aa11.21□□□□□ -0.62
CPNE1-225ENST00000483495 HERV-K104P61576 105 aa11.21□□□□□ -0.62
CPNE1-225ENST00000483495 MZT1Q08AG7 82 aa11.21□□□□□ -0.62
CPNE1-225ENST00000483495 EXOSC2Q13868 293 aaKnown RBP11.21□□□□□ -0.62
CPNE1-225ENST00000483495 MSMPQ1L6U9 139 aa11.21□□□□□ -0.62
CPNE1-225ENST00000483495 RTN4IP1Q8WWV3 396 aaPredicted RBP11.21□□□□□ -0.62
CPNE1-225ENST00000483495 ARL6Q9H0F7 186 aa11.21□□□□□ -0.62
CPNE1-225ENST00000483495 TMEM165Q9HC07 324 aa11.21□□□□□ -0.62
CPNE1-225ENST00000483495 SLC2A9Q9NRM0 540 aa11.21□□□□□ -0.62
CPNE1-225ENST00000483495 TUBD1Q9UJT1 453 aa11.21□□□□□ -0.62
CPNE1-225ENST00000483495 FZR1Q9UM11 496 aa11.21□□□□□ -0.62
CPNE1-225ENST00000483495 SPEF1Q9Y4P9 236 aa11.21□□□□□ -0.62
CPNE1-225ENST00000483495 BSNQ9UPA5 3926 aa11.21□□□□□ -0.62
CPNE1-225ENST00000483495 DMXL2Q8TDJ6 3036 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 TRBV6-7A0A0A0MS04 114 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 IGKV1-6A0A0C4DH72 117 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 A0A0D9SG52 128 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 C13orf42A0A1B0GVH6 325 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 H7C1Q1 480 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 SH2D1BO14796 132 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 OR2F2O95006 317 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 PTBP3O95758 552 aaKnown RBP11.2□□□□□ -0.62
CPNE1-225ENST00000483495 IGHV3-13P01766 116 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 CRYAAP02489 173 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 FXYD4P59646 89 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 FAM27E3Q08E93 113 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 IL15RAQ13261 267 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 OR2F1Q13607 317 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 ABCA11PQ4W5N1 156 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 PAN3Q58A45 887 aaKnown RBP11.2□□□□□ -0.62
CPNE1-225ENST00000483495 ZNF497Q6ZNH5 498 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 MOB1BQ7L9L4 216 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 LRTM2Q8N967 370 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 OR4A4PQ8NGN8 299 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 C2orf50Q96LR7 162 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 SYT3Q9BQG1 590 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 MSL2Q9HCI7 577 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 RASL12Q9NYN1 266 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 ELOVL5Q9NYP7 299 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 RDH8Q9NYR8 311 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 JKAMPQ9P055 326 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 KCNIP3Q9Y2W7 256 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 ESPL1Q14674 2120 aa11.2□□□□□ -0.62
CPNE1-225ENST00000483495 RP2O75695 350 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 DIRAS3O95661 229 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 FAM87AP0C7U9 286 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 LMO1P25800 156 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 CCKARP32238 428 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 HLA-DRB3P79483 266 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 TMEM187Q14656 261 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 LRRC37A5PQ49AS3 106 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 FIP1L1Q6UN15 594 aaKnown RBP11.19□□□□□ -0.62
CPNE1-225ENST00000483495 PCSK4Q6UW60 755 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 WDR82Q6UXN9 313 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 FAM185AQ8N0U4 392 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 KCNRGQ8N5I3 272 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 THAP6Q8TBB0 222 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 VRK1Q99986 396 aaPredicted RBP11.19□□□□□ -0.62
CPNE1-225ENST00000483495 CABLES2Q9BTV7 478 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 SUCNR1Q9BXA5 334 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 ASF1BQ9NVP2 202 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 UBQLN2Q9UHD9 624 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 PCDHB10Q9UN67 800 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 MAB21L2Q9Y586 359 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 CEP295Q9C0D2 2601 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 MPTX1A8MV57 137 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 NPIPB11E5RHQ5 1161 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 ERVH48-1M5A8F1 160 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 HAND1O96004 215 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 LYL1P12980 280 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 GNRHRP30968 328 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 CD200P41217 278 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 RND3P61587 244 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 PRR30Q53SZ7 412 aaPredicted RBP11.19□□□□□ -0.62
CPNE1-225ENST00000483495 ZNF826PQ6ZT77 177 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 C5orf24Q7Z6I8 188 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 LDLRAD3Q86YD5 345 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 CCDC71LQ8N9Z2 235 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 OR5T2Q8NGG2 359 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 PLPPR1Q8TBJ4 325 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 OR10C1Q96KK4 312 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 METTL8Q9H825 291 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms