RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 TCF23Q7RTU1 214 aa17.11■□□□□ 0.33
SEC13-217ENST00000482647 TMEM158Q8WZ71 300 aa17.11■□□□□ 0.33
SEC13-217ENST00000482647 CORO2AQ92828 525 aa17.11■□□□□ 0.33
SEC13-217ENST00000482647 ZDHHC16Q969W1 377 aa17.11■□□□□ 0.33
SEC13-217ENST00000482647 COQ2Q96H96 371 aa17.11■□□□□ 0.33
SEC13-217ENST00000482647 ZNF48Q96MX3 618 aaPredicted RBP17.11■□□□□ 0.33
SEC13-217ENST00000482647 NCOR1P1Q9H4R4 102 aa17.11■□□□□ 0.33
SEC13-217ENST00000482647 ING3Q9NXR8 418 aa17.11■□□□□ 0.33
SEC13-217ENST00000482647 STUB1Q9UNE7 303 aa17.11■□□□□ 0.33
SEC13-217ENST00000482647 FAM90A10PA6NDY2 464 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 FAM90A18PA6NE21 464 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 FAM90A16PA6NEW6 464 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 FAM90A20PA6NIJ5 464 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 FAM90A8PA6NJQ4 464 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 FAM90A7PA6NKC0 464 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 FAM90A22PA8MWA6 464 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 FAM90A12PA8MX19 464 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 FAM90A5PA8MXJ8 464 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 FAM90A23PA8MXZ1 464 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 NPFFO15130 113 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 FAM90A15PP0C7V4 464 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 FAM90A13PP0C7W8 464 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 FAM90A14PP0C7W9 464 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 FAM90A24PP0C7X0 464 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 MYL9P24844 172 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 BAMBIQ13145 260 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 KLRD1Q13241 179 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 DEFB112Q30KQ8 113 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 C22orf42Q6IC83 251 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 PIP4P2Q8N4L2 257 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 KCNG3Q8TAE7 436 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 FAM46BQ96A09 425 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 GFI1Q99684 422 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 GAL3ST2Q9H3Q3 398 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 ZNF696Q9H7X3 374 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 OR6C3Q9NZP0 311 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 ZNF581Q9P0T4 197 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 FAM96BQ9Y3D0 163 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 V9GY05 133 aa17.1■□□□□ 0.33
SEC13-217ENST00000482647 SLC17A2O00624 439 aa17.09■□□□□ 0.33
SEC13-217ENST00000482647 BPNT1O95861 308 aa17.09■□□□□ 0.33
SEC13-217ENST00000482647 IGHV1-8P0DP01 117 aa17.09■□□□□ 0.33
SEC13-217ENST00000482647 VSIG8P0DPA2 414 aa17.09■□□□□ 0.33
SEC13-217ENST00000482647 FGF9P31371 208 aaPredicted RBP17.09■□□□□ 0.33
SEC13-217ENST00000482647 PAX5Q02548 391 aa17.09■□□□□ 0.33
SEC13-217ENST00000482647 RAB11BQ15907 218 aa17.09■□□□□ 0.33
SEC13-217ENST00000482647 ZNF565Q8N9K5 539 aa17.09■□□□□ 0.33
SEC13-217ENST00000482647 SLC25A28Q96A46 364 aa17.09■□□□□ 0.33
SEC13-217ENST00000482647 Q96M66 194 aa17.09■□□□□ 0.33
SEC13-217ENST00000482647 PRDM13Q9H4Q3 707 aa17.09■□□□□ 0.33
SEC13-217ENST00000482647 TAS2R3Q9NYW6 316 aa17.09■□□□□ 0.33
SEC13-217ENST00000482647 SSR3Q9UNL2 185 aa17.09■□□□□ 0.33
SEC13-217ENST00000482647 COL6A5A8TX70 2615 aa17.08■□□□□ 0.33
SEC13-217ENST00000482647 MEIKINA0A087WXM9 373 aa17.08■□□□□ 0.32
SEC13-217ENST00000482647 A0A0U1RQK1 487 aa17.08■□□□□ 0.32
SEC13-217ENST00000482647 A0A1W2PRD5 423 aa17.08■□□□□ 0.32
SEC13-217ENST00000482647 A0A1W2PRF3 423 aa17.08■□□□□ 0.32
SEC13-217ENST00000482647 A0A1W2PRM7 423 aa17.08■□□□□ 0.32
SEC13-217ENST00000482647 RNF212BA8MTL3 300 aa17.08■□□□□ 0.32
SEC13-217ENST00000482647 TRIM77I1YAP6 450 aa17.08■□□□□ 0.32
SEC13-217ENST00000482647 MPIG6BO95866 241 aa17.08■□□□□ 0.32
SEC13-217ENST00000482647 ARSBP15848 533 aa17.08■□□□□ 0.32
SEC13-217ENST00000482647 RBM39Q14498 530 aaKnown RBP17.08■□□□□ 0.32
SEC13-217ENST00000482647 MIDNQ504T8 468 aa17.08■□□□□ 0.32
SEC13-217ENST00000482647 HCP5Q6MZN7 132 aa17.08■□□□□ 0.32
SEC13-217ENST00000482647 ZNF782Q6ZMW2 699 aaPredicted RBP17.08■□□□□ 0.32
SEC13-217ENST00000482647 OR13D1Q8NGV5 346 aa17.08■□□□□ 0.32
SEC13-217ENST00000482647 ZFAND2BQ8WV99 257 aa17.08■□□□□ 0.32
SEC13-217ENST00000482647 TXNL4BQ9NX01 149 aaKnown RBP17.08■□□□□ 0.32
SEC13-217ENST00000482647 RCC2Q9P258 522 aaKnown RBP17.08■□□□□ 0.32
SEC13-217ENST00000482647 KIF25Q9UIL4 384 aa17.08■□□□□ 0.32
SEC13-217ENST00000482647 MDFIC2A0A1B0GVS7 189 aa17.07■□□□□ 0.32
SEC13-217ENST00000482647 MEIOCA2RUB1 952 aa17.07■□□□□ 0.32
SEC13-217ENST00000482647 MCRIP1C9JLW8 97 aa17.07■□□□□ 0.32
SEC13-217ENST00000482647 CD36P16671 472 aa17.07■□□□□ 0.32
SEC13-217ENST00000482647 FUT3P21217 361 aa17.07■□□□□ 0.32
SEC13-217ENST00000482647 COX7A1P24310 79 aa17.07■□□□□ 0.32
SEC13-217ENST00000482647 P2RY14Q15391 338 aa17.07■□□□□ 0.32
SEC13-217ENST00000482647 RSBN1Q5VWQ0 802 aaPredicted RBP17.07■□□□□ 0.32
SEC13-217ENST00000482647 SLC35E4Q6ICL7 350 aa17.07■□□□□ 0.32
SEC13-217ENST00000482647 OR10K2Q6IF99 312 aa17.07■□□□□ 0.32
SEC13-217ENST00000482647 RAB12Q6IQ22 244 aa17.07■□□□□ 0.32
SEC13-217ENST00000482647 BRICD5Q6PL45 260 aa17.07■□□□□ 0.32
SEC13-217ENST00000482647 PNKDQ8N490 385 aa17.07■□□□□ 0.32
SEC13-217ENST00000482647 ZDHHC22Q8N966 263 aa17.07■□□□□ 0.32
SEC13-217ENST00000482647 PLPPR1Q8TBJ4 325 aa17.07■□□□□ 0.32
SEC13-217ENST00000482647 NEK7Q8TDX7 302 aa17.07■□□□□ 0.32
SEC13-217ENST00000482647 TMEM59Q9BXS4 323 aa17.07■□□□□ 0.32
SEC13-217ENST00000482647 ESM1Q9NQ30 184 aa17.07■□□□□ 0.32
SEC13-217ENST00000482647 PEX16Q9Y5Y5 336 aa17.07■□□□□ 0.32
SEC13-217ENST00000482647 SESN1Q9Y6P5 492 aa17.07■□□□□ 0.32
SEC13-217ENST00000482647 TMEM30CPA0ZSE6 113 aa17.06■□□□□ 0.32
SEC13-217ENST00000482647 TMEM14DPA8MWL7 114 aa17.06■□□□□ 0.32
SEC13-217ENST00000482647 CLPXO76031 633 aa17.06■□□□□ 0.32
SEC13-217ENST00000482647 GLAP06280 429 aa17.06■□□□□ 0.32
SEC13-217ENST00000482647 RAB3BP20337 219 aa17.06■□□□□ 0.32
SEC13-217ENST00000482647 SAA4P35542 130 aa17.06■□□□□ 0.32
SEC13-217ENST00000482647 RPS27AP62979 156 aaKnown RBP17.06■□□□□ 0.32
SEC13-217ENST00000482647 QRFPP83859 136 aa17.06■□□□□ 0.32
SEC13-217ENST00000482647 KRTAP24-1Q3LI83 254 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms