RNA–Protein interactions for RNA: ENST00000482227.5

CNKSR1-207, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-207ENST00000482227 VSIRQ9H7M9 311 aa13.42□□□□□ -0.26
CNKSR1-207ENST00000482227 SEC16AO15027 2179 aa13.42□□□□□ -0.26
CNKSR1-207ENST00000482227 H3BMH7 237 aa13.42□□□□□ -0.26
CNKSR1-207ENST00000482227 CHST1O43916 411 aa13.42□□□□□ -0.26
CNKSR1-207ENST00000482227 PPYP01298 95 aa13.42□□□□□ -0.26
CNKSR1-207ENST00000482227 MMP7P09237 267 aaPredicted RBP13.42□□□□□ -0.26
CNKSR1-207ENST00000482227 NUBP1P53384 320 aa13.42□□□□□ -0.26
CNKSR1-207ENST00000482227 FOXL2P58012 376 aa13.42□□□□□ -0.26
CNKSR1-207ENST00000482227 PIGYQ3MUY2 71 aa13.42□□□□□ -0.26
CNKSR1-207ENST00000482227 PARM1Q6UWI2 310 aa13.42□□□□□ -0.26
CNKSR1-207ENST00000482227 LCN15Q6UWW0 184 aa13.42□□□□□ -0.26
CNKSR1-207ENST00000482227 ZNF66Q6ZN08 573 aa13.42□□□□□ -0.26
CNKSR1-207ENST00000482227 R3HDM4Q96D70 268 aa13.42□□□□□ -0.26
CNKSR1-207ENST00000482227 GPHA2Q96T91 129 aa13.42□□□□□ -0.26
CNKSR1-207ENST00000482227 FBRSQ9HAH7 460 aa13.42□□□□□ -0.26
CNKSR1-207ENST00000482227 LAMP3Q9UQV4 416 aa13.42□□□□□ -0.26
CNKSR1-207ENST00000482227 HS3ST3A1Q9Y663 406 aa13.42□□□□□ -0.26
CNKSR1-207ENST00000482227 SPTY2D1-AS1A0A0U1RR47 76 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 IFNL4K9M1U5 179 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 M0R143 59 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 FGF5P12034 268 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 FGF8P55075 233 aaPredicted RBP13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 SRPXP78539 464 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 EXT1Q16394 746 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 NMSQ5H8A3 153 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 ZNF787Q6DD87 383 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 C16orf82Q7Z2V1 217 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 TBC1D26Q86UD7 250 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 ZNF695Q8IW36 515 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 NECAP1Q8NC96 275 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 ABHD14BQ96IU4 210 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 RNF115Q9Y4L5 304 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 A0A1W2PNR3 127 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 CLEC18AA5D8T8 446 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 HLA-HP01893 362 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 RAB4AP20338 218 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 ERVFC1-1P60608 527 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 HERV-K104P61576 105 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 HNF4GQ14541 408 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 PRSS8Q16651 343 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 CLEC18CQ8NCF0 446 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 OR51G1Q8NGK1 321 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 POC1BQ8TC44 478 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 NAT6Q93015 286 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 SPIN2AQ99865 258 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 SPIN2BQ9BPZ2 258 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 CERS4Q9HA82 394 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 ZNF286AQ9HBT8 521 aa13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 UBE2J1Q9Y385 318 aaPredicted RBP13.41□□□□□ -0.26
CNKSR1-207ENST00000482227 ERVS71-1P61550 626 aa13.4□□□□□ -0.26
CNKSR1-207ENST00000482227 IL24Q13007 206 aa13.4□□□□□ -0.26
CNKSR1-207ENST00000482227 PMS2P11Q13670 270 aa13.4□□□□□ -0.26
CNKSR1-207ENST00000482227 PDCD1Q15116 288 aa13.4□□□□□ -0.26
CNKSR1-207ENST00000482227 ACY3Q96HD9 319 aa13.4□□□□□ -0.26
CNKSR1-207ENST00000482227 RSG1Q9BU20 258 aa13.4□□□□□ -0.26
CNKSR1-207ENST00000482227 PTRH2Q9Y3E5 179 aaKnown RBP13.4□□□□□ -0.26
CNKSR1-207ENST00000482227 PIAS3Q9Y6X2 628 aa13.4□□□□□ -0.26
CNKSR1-207ENST00000482227 IGHV3-20A0A0C4DH32 117 aa13.4□□□□□ -0.26
CNKSR1-207ENST00000482227 IGKV1-12A0A0C4DH73 117 aa13.4□□□□□ -0.26
CNKSR1-207ENST00000482227 IGKV1D-12P01611 117 aa13.4□□□□□ -0.26
CNKSR1-207ENST00000482227 NPBWR2P48146 333 aa13.4□□□□□ -0.26
CNKSR1-207ENST00000482227 GNB2P62879 340 aa13.4□□□□□ -0.26
CNKSR1-207ENST00000482227 C21orf62-AS1Q17RA5 79 aa13.4□□□□□ -0.26
CNKSR1-207ENST00000482227 SNAI3Q3KNW1 292 aa13.4□□□□□ -0.26
CNKSR1-207ENST00000482227 TGIF2LYQ8IUE0 185 aa13.4□□□□□ -0.26
CNKSR1-207ENST00000482227 ZNF295-AS1Q8N0V1 137 aa13.4□□□□□ -0.26
CNKSR1-207ENST00000482227 OR2V1Q8NHB1 315 aa13.4□□□□□ -0.26
CNKSR1-207ENST00000482227 TMEM170AQ8WVE7 144 aa13.4□□□□□ -0.26
CNKSR1-207ENST00000482227 MBD3L1Q8WWY6 194 aa13.4□□□□□ -0.26
CNKSR1-207ENST00000482227 P2RX4Q99571 388 aa13.4□□□□□ -0.26
CNKSR1-207ENST00000482227 OR2J2O76002 312 aa13.39□□□□□ -0.27
CNKSR1-207ENST00000482227 MBP02144 154 aa13.39□□□□□ -0.27
CNKSR1-207ENST00000482227 THAP3Q8WTV1 239 aaPredicted RBP13.39□□□□□ -0.27
CNKSR1-207ENST00000482227 ZNF845Q96IR2 970 aaPredicted RBP13.39□□□□□ -0.27
CNKSR1-207ENST00000482227 TMEM208Q9BTX3 173 aa13.39□□□□□ -0.27
CNKSR1-207ENST00000482227 B4E171 279 aa13.39□□□□□ -0.27
CNKSR1-207ENST00000482227 IGHV4-34P06331 123 aa13.39□□□□□ -0.27
CNKSR1-207ENST00000482227 TUBG1P23258 451 aa13.39□□□□□ -0.27
CNKSR1-207ENST00000482227 OTX1P32242 354 aaPredicted RBP13.39□□□□□ -0.27
CNKSR1-207ENST00000482227 TSPAN7P41732 249 aa13.39□□□□□ -0.27
CNKSR1-207ENST00000482227 SUMO3P55854 103 aaPredicted RBP13.39□□□□□ -0.27
CNKSR1-207ENST00000482227 ENDOGQ14249 297 aaKnown RBP13.39□□□□□ -0.27
CNKSR1-207ENST00000482227 ADIRFQ15847 76 aa13.39□□□□□ -0.27
CNKSR1-207ENST00000482227 IQCJQ1A5X6 159 aa13.39□□□□□ -0.27
CNKSR1-207ENST00000482227 C1orf189Q5VU69 101 aa13.39□□□□□ -0.27
CNKSR1-207ENST00000482227 CENPVQ7Z7K6 275 aaPredicted RBP13.39□□□□□ -0.27
CNKSR1-207ENST00000482227 TMEM37Q8WXS4 190 aa13.39□□□□□ -0.27
CNKSR1-207ENST00000482227 PCGF1Q9BSM1 259 aa13.39□□□□□ -0.27
CNKSR1-207ENST00000482227 LRRC61Q9BV99 259 aa13.39□□□□□ -0.27
CNKSR1-207ENST00000482227 ELOVL1Q9BW60 279 aa13.39□□□□□ -0.27
CNKSR1-207ENST00000482227 SLC7A10Q9NS82 523 aa13.39□□□□□ -0.27
CNKSR1-207ENST00000482227 TMEM210A6NLX4 147 aa13.38□□□□□ -0.27
CNKSR1-207ENST00000482227 CEBPZOSA8MTT3 80 aa13.38□□□□□ -0.27
CNKSR1-207ENST00000482227 H3BP45 60 aa13.38□□□□□ -0.27
CNKSR1-207ENST00000482227 ELLP55199 621 aaPredicted RBP13.38□□□□□ -0.27
CNKSR1-207ENST00000482227 PRSS12P56730 875 aa13.38□□□□□ -0.27
CNKSR1-207ENST00000482227 HERPUD1Q15011 391 aa13.38□□□□□ -0.27
CNKSR1-207ENST00000482227 CLEC12BQ2HXU8 276 aa13.38□□□□□ -0.27
CNKSR1-207ENST00000482227 TMEM92Q6UXU6 159 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms