RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 NTAN1Q96AB6 310 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 PPWD1Q96BP3 646 aaKnown RBP2.51□□□□□ -2.01
SMC6-208ENST00000481708 NODALQ96S42 347 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 TSNAXQ99598 290 aaKnown RBP2.51□□□□□ -2.01
SMC6-208ENST00000481708 NIPSNAP1Q9BPW8 284 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 DEFB127Q9H1M4 99 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 OR51I1Q9H343 314 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 MAP1LC3AQ9H492 121 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 C6orf106Q9H6K1 298 aaPredicted RBP2.51□□□□□ -2.01
SMC6-208ENST00000481708 GOLGA4Q13439 2230 aaKnown RBP2.51□□□□□ -2.01
SMC6-208ENST00000481708 A0A1B0GXF2 115 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 SOX15O60248 233 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 ZG16O60844 167 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 SPAG7O75391 227 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 IFNA16P05015 189 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 GNB3P16520 340 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 RPL32P62910 135 aaKnown RBP2.51□□□□□ -2.01
SMC6-208ENST00000481708 TMEM86BQ8N661 226 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 OR10X1Q8NGY0 326 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 OR6K3Q8NGY3 331 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 PIGXQ8TBF5 258 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 IL1F10Q8WWZ1 152 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 C22orf15Q8WYQ4 148 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 C18orf12Q96KH6 178 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 SPACA5Q96QH8 159 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 DDX31Q9H8H2 851 aaKnown RBP2.51□□□□□ -2.01
SMC6-208ENST00000481708 POU2F3Q9UKI9 436 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 GOLT1BQ9Y3E0 138 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 AHCTF1Q8WYP5 2266 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 CHD3Q12873 2000 aaKnown RBP2.51□□□□□ -2.01
SMC6-208ENST00000481708 DCHS2Q6V1P9 2916 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 SPTBN1Q01082 2364 aaKnown RBP2.51□□□□□ -2.01
SMC6-208ENST00000481708 IGLV3-16A0A075B6K0 115 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 SAA2-SAA4A0A096LPE2 208 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 IGHV2OR16-5A0A0B4J2B6 119 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 C8orf87E5RJ46 101 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 EPPINO95925 133 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 KLK3P07288 261 aaPredicted RBP2.51□□□□□ -2.01
SMC6-208ENST00000481708 OR5H8P0DN80 308 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 LMO2P25791 158 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 CEBPGP53567 150 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 TAS2R60P59551 318 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 RAB8AP61006 207 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 ST3GAL4Q11206 333 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 HBMQ6B0K9 141 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 BAIAP2L2Q6UXY1 529 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 FAM19A5Q7Z5A7 132 aaPredicted RBP2.51□□□□□ -2.01
SMC6-208ENST00000481708 NRMQ8IXM6 262 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 FTMTQ8N4E7 242 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 CCDC54Q8NEL0 328 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 EBNA1BP2Q99848 306 aaKnown RBP2.51□□□□□ -2.01
SMC6-208ENST00000481708 RTBDNQ9BSG5 229 aaPredicted RBP2.51□□□□□ -2.01
SMC6-208ENST00000481708 ENOPH1Q9UHY7 261 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 BTNL2Q9UIR0 455 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 TEP1Q99973 2627 aaKnown RBP2.51□□□□□ -2.01
SMC6-208ENST00000481708 IGHV3-16A0A0C4DH30 117 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 KLF18A0A0U1RQI7 1052 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 SPAARA0A1B0GVQ0 90 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 E5RI56 91 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 C16orf97H3BN30 126 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 IDH3BO43837 385 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 CALB1P05937 261 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 BCHEP06276 602 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 IFI6P09912 130 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 AKR1C4P17516 323 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 HRH1P35367 487 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 PCK1P35558 622 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 NCBP2P52298 156 aaKnown RBP eCLIP2.5□□□□□ -2.01
SMC6-208ENST00000481708 DVL1P1P54792 670 aaPredicted RBP2.5□□□□□ -2.01
SMC6-208ENST00000481708 TCL1AP56279 114 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 PPP1CBP62140 327 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 FMODQ06828 376 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 SRSF7Q16629 238 aaKnown RBP eCLIP2.5□□□□□ -2.01
SMC6-208ENST00000481708 TMEM176BQ3YBM2 270 aaPredicted RBP2.5□□□□□ -2.01
SMC6-208ENST00000481708 HES3Q5TGS1 186 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 ZNF676Q8N7Q3 588 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 ARIH2OSQ8N7S6 290 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 TSTD1Q8NFU3 115 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 OR10J6PQ8NGY7 276 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 C9orf85Q96MD7 179 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 RPF2Q9H7B2 306 aaKnown RBP2.5□□□□□ -2.01
SMC6-208ENST00000481708 OR1A1Q9P1Q5 309 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 STARD9Q9P2P6 4700 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 FBN1P35555 2871 aaKnown RBP2.5□□□□□ -2.01
SMC6-208ENST00000481708 LRRK2Q5S007 2527 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 IGHV1OR15-1A0A075B7D0 117 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 A0A087WUJ7 227 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 ISPDA4D126 451 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 KPNA3O00505 521 aaPredicted RBP2.5□□□□□ -2.01
SMC6-208ENST00000481708 SLC16A4O15374 487 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 HCRTR1O43613 425 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 IFNA14P01570 189 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 OCM2P0CE71 109 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 IFNGR2P38484 337 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 DLX6P56179 175 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 HLA-DRB5Q30154 266 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 ZNF620Q6ZNG0 422 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 NOTCH2NLQ7Z3S9 236 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 LRRTM1Q86UE6 522 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 METTL13Q8N6R0 699 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms