RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 IL36GQ9NZH8 169 aa9.72□□□□□ -0.85
SQSTM1-207ENST00000481335 G3V4G9 280 aa9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 CGB3P0DN86 165 aa9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 CGB7P0DN87 165 aa9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 CALCBP10092 127 aa9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 C21orf33P30042 268 aaPredicted RBP9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 BLCAPP62952 87 aa9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 CD83Q01151 205 aa9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 ATXN7L3Q14CW9 347 aaPredicted RBP9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 ZSCAN26Q16670 478 aa9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 C17orf58Q2M2W7 97 aa9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 PAN3Q58A45 887 aaKnown RBP9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 TPTE2P1Q5T6R2 138 aa9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 ASCL4Q6XD76 172 aa9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 TMPRSS11AQ6ZMR5 421 aa9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 THNSL2Q86YJ6 484 aa9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 C1QL4Q86Z23 238 aa9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 ZNF555Q8NEP9 628 aa9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 CNIH3Q8TBE1 160 aa9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 APH1BQ8WW43 257 aa9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 R3HDM4Q96D70 268 aa9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 KIRREL1Q96J84 757 aa9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 GPER1Q99527 375 aa9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 CITED2Q99967 270 aaPredicted RBP9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 SLC25A33Q9BSK2 321 aa9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 ZNF286AQ9HBT8 521 aa9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 PAK1IP1Q9NWT1 392 aaPredicted RBP9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 SMPD3Q9NY59 655 aaPredicted RBP9.71□□□□□ -0.86
SQSTM1-207ENST00000481335 ADARB2-AS1A8MUL3 147 aa9.7□□□□□ -0.86
SQSTM1-207ENST00000481335 E9PI62 339 aa9.7□□□□□ -0.86
SQSTM1-207ENST00000481335 LY6LH3BQJ8 138 aa9.7□□□□□ -0.86
SQSTM1-207ENST00000481335 GABRPO00591 440 aa9.7□□□□□ -0.86
SQSTM1-207ENST00000481335 ZNF780AO75290 641 aaPredicted RBP9.7□□□□□ -0.86
SQSTM1-207ENST00000481335 IL1AP01583 271 aa9.7□□□□□ -0.86
SQSTM1-207ENST00000481335 LIMS3P0CW19 117 aa9.7□□□□□ -0.86
SQSTM1-207ENST00000481335 LIMS4P0CW20 117 aa9.7□□□□□ -0.86
SQSTM1-207ENST00000481335 PPP3R1P63098 170 aa9.7□□□□□ -0.86
SQSTM1-207ENST00000481335 SCN1BQ07699 218 aa9.7□□□□□ -0.86
SQSTM1-207ENST00000481335 MED21Q13503 144 aa9.7□□□□□ -0.86
SQSTM1-207ENST00000481335 RSU1Q15404 277 aa9.7□□□□□ -0.86
SQSTM1-207ENST00000481335 NSUN5P1Q3KNT7 163 aa9.7□□□□□ -0.86
SQSTM1-207ENST00000481335 OR4X2Q8NGF9 303 aa9.7□□□□□ -0.86
SQSTM1-207ENST00000481335 TNFAIP8L1Q8WVP5 186 aa9.7□□□□□ -0.86
SQSTM1-207ENST00000481335 TMEM106AQ96A25 262 aa9.7□□□□□ -0.86
SQSTM1-207ENST00000481335 RPEQ96AT9 228 aa9.7□□□□□ -0.86
SQSTM1-207ENST00000481335 SMIM19Q96E16 107 aa9.7□□□□□ -0.86
SQSTM1-207ENST00000481335 SLC29A1Q99808 456 aa9.7□□□□□ -0.86
SQSTM1-207ENST00000481335 AMBNQ9NP70 447 aa9.7□□□□□ -0.86
SQSTM1-207ENST00000481335 TMEM138Q9NPI0 162 aa9.7□□□□□ -0.86
SQSTM1-207ENST00000481335 CALYQ9NYX4 217 aa9.7□□□□□ -0.86
SQSTM1-207ENST00000481335 AASSQ9UDR5 926 aa9.7□□□□□ -0.86
SQSTM1-207ENST00000481335 MEIKINA0A087WXM9 373 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 TRAV24A0A0B4J272 114 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 FAM90A18PA6NE21 464 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 FAM90A16PA6NEW6 464 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 FAM90A20PA6NIJ5 464 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 FAM90A9PA6NNJ1 464 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 FAM90A12PA8MX19 464 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 FAM90A5PA8MXJ8 464 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 NPIPB11E5RHQ5 1161 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 EBAG9O00559 213 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 FAM90A15PP0C7V4 464 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 FAM90A13PP0C7W8 464 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 FAM90A14PP0C7W9 464 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 FAM90A24PP0C7X0 464 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 FAM106CPP0CH98 169 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 JUNBP17275 347 aaPredicted RBP9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 MYL12AP19105 171 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 GDNFP39905 211 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 GLP1RP43220 463 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 RAB7AP51149 207 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 MPV17LQ2QL34 196 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 FBLN7Q53RD9 439 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 RSBN1Q5VWQ0 802 aaPredicted RBP9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 BAIAP2L2Q6UXY1 529 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 RNF144BQ7Z419 303 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 OR8H3Q8N146 312 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 OR5AU1Q8NGC0 362 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 TOMM40LQ969M1 308 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 FAM192AQ9GZU8 254 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 PPIL3Q9H2H8 161 aaKnown RBP9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 IDI2-AS1Q9NZ38 188 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 KIF25Q9UIL4 384 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 DIMT1Q9UNQ2 313 aaKnown RBP9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 MOB4Q9Y3A3 225 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 EXOSC1Q9Y3B2 195 aaKnown RBP9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 TSSC4Q9Y5U2 329 aaPredicted RBP9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 HSPE1-MOB4S4R3N1 261 aa9.69□□□□□ -0.86
SQSTM1-207ENST00000481335 J3QR06 171 aa9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 FGF16O43320 207 aa9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 WBP4O75554 376 aaKnown RBP9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 GPX5O75715 221 aa9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 DUS4LO95620 317 aaKnown RBP9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 CSTBP04080 98 aaKnown RBP9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 NFYBP25208 207 aa9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 ZNF93P35789 620 aaPredicted RBP9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 MADCAM1Q13477 382 aa9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 GPR176Q14439 515 aa9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 TMEM95Q3KNT9 176 aa9.68□□□□□ -0.86
SQSTM1-207ENST00000481335 Q3ZCU0 254 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms