RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 KCNJ8Q15842 424 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 DUX4L9Q6RFH8 374 aaPredicted RBP14.66□□□□□ -0.06
UPF3A-206ENST00000480362 LYPD2Q6UXB3 125 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 HOGA1Q86XE5 327 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 TIMD4Q96H15 378 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 MED30Q96HR3 178 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 RIMS4Q9H426 269 aaPredicted RBP14.66□□□□□ -0.06
UPF3A-206ENST00000480362 DUX4Q9UBX2 424 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 TBC1D24Q9ULP9 559 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 ANAPC10Q9UM13 185 aa14.66□□□□□ -0.06
UPF3A-206ENST00000480362 SIGLEC5O15389 551 aa14.65□□□□□ -0.06
UPF3A-206ENST00000480362 TMPRSS2O15393 492 aa14.65□□□□□ -0.06
UPF3A-206ENST00000480362 ADAM20O43506 726 aa14.65□□□□□ -0.06
UPF3A-206ENST00000480362 NDUFA2O43678 99 aa14.65□□□□□ -0.06
UPF3A-206ENST00000480362 SSX4O60224 188 aa14.65□□□□□ -0.06
UPF3A-206ENST00000480362 NAPSAO96009 420 aa14.65□□□□□ -0.06
UPF3A-206ENST00000480362 MT-ND4P03905 459 aa14.65□□□□□ -0.06
UPF3A-206ENST00000480362 TK1P04183 234 aa14.65□□□□□ -0.06
UPF3A-206ENST00000480362 SELLP14151 372 aa14.65□□□□□ -0.06
UPF3A-206ENST00000480362 NAT1P18440 290 aa14.65□□□□□ -0.06
UPF3A-206ENST00000480362 DEFA1P59665 94 aa14.65□□□□□ -0.06
UPF3A-206ENST00000480362 DEFA3P59666 94 aa14.65□□□□□ -0.06
UPF3A-206ENST00000480362 AP3S2P59780 193 aa14.65□□□□□ -0.06
UPF3A-206ENST00000480362 IL13RA1P78552 427 aa14.65□□□□□ -0.06
UPF3A-206ENST00000480362 AESQ08117 197 aa14.65□□□□□ -0.06
UPF3A-206ENST00000480362 ZNF497Q6ZNH5 498 aa14.65□□□□□ -0.06
UPF3A-206ENST00000480362 SLC36A1Q7Z2H8 476 aa14.65□□□□□ -0.06
UPF3A-206ENST00000480362 FAM216BQ8N7L0 139 aa14.65□□□□□ -0.06
UPF3A-206ENST00000480362 TMEM229BQ8NBD8 167 aa14.65□□□□□ -0.06
UPF3A-206ENST00000480362 TMEM185AQ8NFB2 350 aa14.65□□□□□ -0.06
UPF3A-206ENST00000480362 OR4K15Q8NH41 348 aa14.65□□□□□ -0.06
UPF3A-206ENST00000480362 SETD6Q8TBK2 473 aa14.65□□□□□ -0.06
UPF3A-206ENST00000480362 MRPL30Q8TCC3 161 aaKnown RBP14.65□□□□□ -0.06
UPF3A-206ENST00000480362 COX4I2Q96KJ9 171 aa14.65□□□□□ -0.06
UPF3A-206ENST00000480362 IGKV1D-8A0A087WSZ0 117 aa14.64□□□□□ -0.07
UPF3A-206ENST00000480362 H7C1Q1 480 aa14.64□□□□□ -0.07
UPF3A-206ENST00000480362 MGST3O14880 152 aa14.64□□□□□ -0.07
UPF3A-206ENST00000480362 HLA-DMAP28067 261 aa14.64□□□□□ -0.07
UPF3A-206ENST00000480362 TAS2R19P59542 299 aa14.64□□□□□ -0.07
UPF3A-206ENST00000480362 ASAH1Q13510 395 aa14.64□□□□□ -0.07
UPF3A-206ENST00000480362 DYRK1AQ13627 763 aa14.64□□□□□ -0.07
UPF3A-206ENST00000480362 RSBN1Q5VWQ0 802 aaPredicted RBP14.64□□□□□ -0.07
UPF3A-206ENST00000480362 SLC35E4Q6ICL7 350 aa14.64□□□□□ -0.07
UPF3A-206ENST00000480362 OR52W1Q6IF63 320 aa14.64□□□□□ -0.07
UPF3A-206ENST00000480362 Q6ZPA2 131 aa14.64□□□□□ -0.07
UPF3A-206ENST00000480362 GAPTQ8N292 157 aa14.64□□□□□ -0.07
UPF3A-206ENST00000480362 MUC20Q8N307 709 aaPredicted RBP14.64□□□□□ -0.07
UPF3A-206ENST00000480362 POC5Q8NA72 575 aa14.64□□□□□ -0.07
UPF3A-206ENST00000480362 BEST4Q8NFU0 473 aa14.64□□□□□ -0.07
UPF3A-206ENST00000480362 OR5D13Q8NGL4 314 aa14.64□□□□□ -0.07
UPF3A-206ENST00000480362 CCDC107Q8WV48 283 aa14.64□□□□□ -0.07
UPF3A-206ENST00000480362 SNAPC3Q92966 411 aa14.64□□□□□ -0.07
UPF3A-206ENST00000480362 COQ2Q96H96 371 aa14.64□□□□□ -0.07
UPF3A-206ENST00000480362 FAM234AQ9H0X4 552 aa14.64□□□□□ -0.07
UPF3A-206ENST00000480362 Q9N2K0 584 aa14.64□□□□□ -0.07
UPF3A-206ENST00000480362 ZNF107Q9UII5 783 aaPredicted RBP14.64□□□□□ -0.07
UPF3A-206ENST00000480362 EDARQ9UNE0 448 aa14.64□□□□□ -0.07
UPF3A-206ENST00000480362 TRBV6-6A0A0A6YYG2 114 aa14.63□□□□□ -0.07
UPF3A-206ENST00000480362 TMEM30CPA0ZSE6 113 aa14.63□□□□□ -0.07
UPF3A-206ENST00000480362 ZNF736B4DX44 427 aaPredicted RBP14.63□□□□□ -0.07
UPF3A-206ENST00000480362 CD3DP04234 171 aa14.63□□□□□ -0.07
UPF3A-206ENST00000480362 CSN2P05814 226 aa14.63□□□□□ -0.07
UPF3A-206ENST00000480362 GPR6P46095 362 aaPredicted RBP14.63□□□□□ -0.07
UPF3A-206ENST00000480362 ATP5J2P56134 94 aa14.63□□□□□ -0.07
UPF3A-206ENST00000480362 EDDM3AQ14507 147 aa14.63□□□□□ -0.07
UPF3A-206ENST00000480362 KRBOX4Q5JUW0 171 aa14.63□□□□□ -0.07
UPF3A-206ENST00000480362 ZNF525Q8N782 197 aa14.63□□□□□ -0.07
UPF3A-206ENST00000480362 C11orf54Q9H0W9 315 aaPredicted RBP14.63□□□□□ -0.07
UPF3A-206ENST00000480362 BARX1Q9HBU1 254 aaPredicted RBP14.63□□□□□ -0.07
UPF3A-206ENST00000480362 HRASLSQ9HDD0 168 aa14.63□□□□□ -0.07
UPF3A-206ENST00000480362 KAAG1Q9UBP8 84 aa14.63□□□□□ -0.07
UPF3A-206ENST00000480362 KIF25Q9UIL4 384 aa14.63□□□□□ -0.07
UPF3A-206ENST00000480362 TRAPPC2LQ9UL33 140 aa14.63□□□□□ -0.07
UPF3A-206ENST00000480362 LRRK2Q5S007 2527 aa14.63□□□□□ -0.07
UPF3A-206ENST00000480362 FASNP49327 2511 aaKnown RBP14.62□□□□□ -0.07
UPF3A-206ENST00000480362 DOPEY2Q9Y3R5 2298 aa14.62□□□□□ -0.07
UPF3A-206ENST00000480362 TRAV39A0A0B4J263 110 aa14.62□□□□□ -0.07
UPF3A-206ENST00000480362 LYRM1O43325 122 aa14.62□□□□□ -0.07
UPF3A-206ENST00000480362 AKAIN1P0CW23 69 aa14.62□□□□□ -0.07
UPF3A-206ENST00000480362 PAX1P15863 534 aa14.62□□□□□ -0.07
UPF3A-206ENST00000480362 GLIPR1P48060 266 aa14.62□□□□□ -0.07
UPF3A-206ENST00000480362 PDLIM4P50479 330 aa14.62□□□□□ -0.07
UPF3A-206ENST00000480362 SRSF7Q16629 238 aaKnown RBP eCLIP14.62□□□□□ -0.07
UPF3A-206ENST00000480362 TMEM155Q4W5P6 130 aa14.62□□□□□ -0.07
UPF3A-206ENST00000480362 STEAP1BQ6NZ63 245 aa14.62□□□□□ -0.07
UPF3A-206ENST00000480362 ZNF880Q6PDB4 577 aa14.62□□□□□ -0.07
UPF3A-206ENST00000480362 GDPD3Q7L5L3 318 aa14.62□□□□□ -0.07
UPF3A-206ENST00000480362 TPRX1Q8N7U7 411 aa14.62□□□□□ -0.07
UPF3A-206ENST00000480362 COL12A1Q99715 3063 aa14.62□□□□□ -0.07
UPF3A-206ENST00000480362 ZNF286AQ9HBT8 521 aa14.62□□□□□ -0.07
UPF3A-206ENST00000480362 CTSZQ9UBR2 303 aa14.62□□□□□ -0.07
UPF3A-206ENST00000480362 TENM4Q6N022 2769 aa14.62□□□□□ -0.07
UPF3A-206ENST00000480362 MEIKINA0A087WXM9 373 aa14.61□□□□□ -0.07
UPF3A-206ENST00000480362 POM121CA8CG34 1229 aa14.61□□□□□ -0.07
UPF3A-206ENST00000480362 CENPXA8MT69 81 aa14.61□□□□□ -0.07
UPF3A-206ENST00000480362 CEACAM18A8MTB9 384 aa14.61□□□□□ -0.07
UPF3A-206ENST00000480362 M0QYG6 137 aa14.61□□□□□ -0.07
UPF3A-206ENST00000480362 NDUFB3O43676 98 aa14.61□□□□□ -0.07
UPF3A-206ENST00000480362 RAB3DO95716 219 aa14.61□□□□□ -0.07
UPF3A-206ENST00000480362 PMP2P02689 132 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms