RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	IL1A	P01583	271 aa		12.7	□□□□□ -0.38
HDLBP-238	ENST00000479894	DGUOK	Q16854	277 aa		12.7	□□□□□ -0.38
HDLBP-238	ENST00000479894	GPR107	Q5VW38	600 aa		12.7	□□□□□ -0.38
HDLBP-238	ENST00000479894	GLIPR1L1	Q6UWM5	242 aa		12.7	□□□□□ -0.38
HDLBP-238	ENST00000479894	LYPD2	Q6UXB3	125 aa		12.7	□□□□□ -0.38
HDLBP-238	ENST00000479894	CHST4	Q8NCG5	386 aa		12.7	□□□□□ -0.38
HDLBP-238	ENST00000479894		Q8NFD4	153 aa		12.7	□□□□□ -0.38
HDLBP-238	ENST00000479894	OR5R1	Q8NH85	324 aa		12.7	□□□□□ -0.38
HDLBP-238	ENST00000479894	KCNG3	Q8TAE7	436 aa		12.7	□□□□□ -0.38
HDLBP-238	ENST00000479894	HMG20A	Q9NP66	347 aa		12.7	□□□□□ -0.38
HDLBP-238	ENST00000479894	KAAG1	Q9UBP8	84 aa		12.7	□□□□□ -0.38
HDLBP-238	ENST00000479894	STEAP1	Q9UHE8	339 aa		12.7	□□□□□ -0.38
HDLBP-238	ENST00000479894	AK6	Q9Y3D8	172 aa	Known RBP	12.7	□□□□□ -0.38
HDLBP-238	ENST00000479894	IFITM5	A6NNB3	132 aa		12.69	□□□□□ -0.38
HDLBP-238	ENST00000479894	AIP	O00170	330 aa		12.69	□□□□□ -0.38
HDLBP-238	ENST00000479894	SLC22A1	O15245	554 aa		12.69	□□□□□ -0.38
HDLBP-238	ENST00000479894	ANGPTL7	O43827	346 aa		12.69	□□□□□ -0.38
HDLBP-238	ENST00000479894	GABARAP	O95166	117 aa		12.69	□□□□□ -0.38
HDLBP-238	ENST00000479894	HTR3B	O95264	441 aa		12.69	□□□□□ -0.38
HDLBP-238	ENST00000479894	CHRM2	P08172	466 aa		12.69	□□□□□ -0.38
HDLBP-238	ENST00000479894	ARSB	P15848	533 aa		12.69	□□□□□ -0.38
HDLBP-238	ENST00000479894	SDC2	P34741	201 aa		12.69	□□□□□ -0.38
HDLBP-238	ENST00000479894	KIR2DS4	P43632	304 aa		12.69	□□□□□ -0.38
HDLBP-238	ENST00000479894	OR3A4P	P47883	348 aa		12.69	□□□□□ -0.38
HDLBP-238	ENST00000479894	SCAND1	P57086	179 aa		12.69	□□□□□ -0.38
HDLBP-238	ENST00000479894	ZNF146	Q15072	292 aa		12.69	□□□□□ -0.38
HDLBP-238	ENST00000479894	NHLRC3	Q5JS37	347 aa		12.69	□□□□□ -0.38
HDLBP-238	ENST00000479894	SFRP4	Q6FHJ7	346 aa	Predicted RBP	12.69	□□□□□ -0.38
HDLBP-238	ENST00000479894	OR2W3	Q7Z3T1	314 aa		12.69	□□□□□ -0.38
HDLBP-238	ENST00000479894	PIP4P2	Q8N4L2	257 aa		12.69	□□□□□ -0.38
HDLBP-238	ENST00000479894	ZNF561	Q8N587	486 aa		12.69	□□□□□ -0.38
HDLBP-238	ENST00000479894	OR4F17	Q8NGA8	305 aa		12.69	□□□□□ -0.38
HDLBP-238	ENST00000479894	OR4F4	Q96R69	305 aa		12.69	□□□□□ -0.38
HDLBP-238	ENST00000479894	CENPO	Q9BU64	300 aa		12.69	□□□□□ -0.38
HDLBP-238	ENST00000479894	SPACA1	Q9HBV2	294 aa		12.69	□□□□□ -0.38
HDLBP-238	ENST00000479894	FAM90A10P	A6NDY2	464 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	FAM90A18P	A6NE21	464 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	FAM90A16P	A6NEW6	464 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	FAM90A20P	A6NIJ5	464 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	FAM90A8P	A6NJQ4	464 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	FAM90A7P	A6NKC0	464 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	FAM90A22P	A8MWA6	464 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	FAM90A12P	A8MX19	464 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	FAM90A5P	A8MXJ8	464 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	FAM90A23P	A8MXZ1	464 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	ADAM20	O43506	726 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	NDUFB3	O43676	98 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	CDRT1	O95170	752 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	ECD	O95905	644 aa	Predicted RBP	12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	FAM90A15P	P0C7V4	464 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	FAM90A13P	P0C7W8	464 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	FAM90A14P	P0C7W9	464 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	FAM90A24P	P0C7X0	464 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	PRKACA	P17612	351 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	BCL3	P20749	454 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	PRDX2	P32119	198 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	IL13RA2	Q14627	380 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	SLC22A6	Q4U2R8	563 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	LRRC10	Q5BKY1	277 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	STUM	Q69YW2	141 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	LYPD6	Q86Y78	171 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	CLVS1	Q8IUQ0	354 aa	Predicted RBP	12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	OSR2	Q8N2R0	312 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	OR51T1	Q8NGJ9	327 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	OR5D13	Q8NGL4	314 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	URM1	Q9BTM9	101 aa	Known RBP	12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	FAM234A	Q9H0X4	552 aa		12.68	□□□□□ -0.38
HDLBP-238	ENST00000479894	SMIM31	A0A1B0GVY4	71 aa		12.67	□□□□□ -0.38
HDLBP-238	ENST00000479894	FUOM	A2VDF0	154 aa		12.67	□□□□□ -0.38
HDLBP-238	ENST00000479894	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	12.67	□□□□□ -0.38
HDLBP-238	ENST00000479894	PSG2	P11465	335 aa		12.67	□□□□□ -0.38
HDLBP-238	ENST00000479894	GABRA2	P47869	451 aa		12.67	□□□□□ -0.38
HDLBP-238	ENST00000479894	GMFB	P60983	142 aa		12.67	□□□□□ -0.38
HDLBP-238	ENST00000479894	CD69	Q07108	199 aa		12.67	□□□□□ -0.38
HDLBP-238	ENST00000479894	MPV17L	Q2QL34	196 aa		12.67	□□□□□ -0.38
HDLBP-238	ENST00000479894	FAM201A	Q5SY85	155 aa		12.67	□□□□□ -0.38
HDLBP-238	ENST00000479894	METAP1D	Q6UB28	335 aa	Predicted RBP	12.67	□□□□□ -0.38
HDLBP-238	ENST00000479894	KLHDC1	Q8N7A1	406 aa		12.67	□□□□□ -0.38
HDLBP-238	ENST00000479894	C11orf44	Q8N8P7	122 aa		12.67	□□□□□ -0.38
HDLBP-238	ENST00000479894	DTX3	Q8N9I9	347 aa		12.67	□□□□□ -0.38
HDLBP-238	ENST00000479894	ANGPTL6	Q8NI99	470 aa		12.67	□□□□□ -0.38
HDLBP-238	ENST00000479894	PTX4	Q96A99	478 aa		12.67	□□□□□ -0.38
HDLBP-238	ENST00000479894	SDSL	Q96GA7	329 aa		12.67	□□□□□ -0.38
HDLBP-238	ENST00000479894	DMRTB1	Q96MA1	342 aa		12.67	□□□□□ -0.38
HDLBP-238	ENST00000479894	B9D2	Q9BPU9	175 aa		12.67	□□□□□ -0.38
HDLBP-238	ENST00000479894	WDR13	Q9H1Z4	485 aa		12.67	□□□□□ -0.38
HDLBP-238	ENST00000479894	RANBP3	Q9H6Z4	567 aa	Predicted RBP	12.67	□□□□□ -0.38
HDLBP-238	ENST00000479894	RBFOX1	Q9NWB1	397 aa	Known RBP	12.67	□□□□□ -0.38
HDLBP-238	ENST00000479894	IGKV1-12	A0A0C4DH73	117 aa		12.66	□□□□□ -0.38
HDLBP-238	ENST00000479894	RFPL4A	A6NLU0	287 aa		12.66	□□□□□ -0.38
HDLBP-238	ENST00000479894	RFPL4AL1	F8VTS6	287 aa		12.66	□□□□□ -0.38
HDLBP-238	ENST00000479894	C3orf84	H3BNL1	204 aa		12.66	□□□□□ -0.38
HDLBP-238	ENST00000479894	ZNF701	M0R085	212 aa	Predicted RBP	12.66	□□□□□ -0.38
HDLBP-238	ENST00000479894	DEGS1	O15121	323 aa		12.66	□□□□□ -0.38
HDLBP-238	ENST00000479894	CRTAP	O75718	401 aa	Predicted RBP	12.66	□□□□□ -0.38
HDLBP-238	ENST00000479894	SCGN	O76038	276 aa		12.66	□□□□□ -0.38
HDLBP-238	ENST00000479894	IGKV1D-12	P01611	117 aa		12.66	□□□□□ -0.38
HDLBP-238	ENST00000479894	GYPA	P02724	150 aa		12.66	□□□□□ -0.38
HDLBP-238	ENST00000479894	CALCB	P10092	127 aa		12.66	□□□□□ -0.38
HDLBP-238	ENST00000479894	SERPINA2	P20848	420 aa		12.66	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms