RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 AWAT2Q6E213 333 aa12.64□□□□□ -0.39
C9orf3-217ENST00000479161 OR11H6Q8NGC7 330 aa12.64□□□□□ -0.39
C9orf3-217ENST00000479161 OR10K1Q8NGX5 313 aa12.64□□□□□ -0.39
C9orf3-217ENST00000479161 TMEM203Q969S6 136 aa12.64□□□□□ -0.39
C9orf3-217ENST00000479161 COQ2Q96H96 371 aa12.64□□□□□ -0.39
C9orf3-217ENST00000479161 CHST6Q9GZX3 395 aa12.64□□□□□ -0.39
C9orf3-217ENST00000479161 CST11Q9H112 138 aa12.64□□□□□ -0.39
C9orf3-217ENST00000479161 GAL3ST2Q9H3Q3 398 aa12.64□□□□□ -0.39
C9orf3-217ENST00000479161 ESM1Q9NQ30 184 aa12.64□□□□□ -0.39
C9orf3-217ENST00000479161 RCC2Q9P258 522 aaKnown RBP12.64□□□□□ -0.39
C9orf3-217ENST00000479161 IGHV3OR16-10A0A075B7F0 116 aa12.63□□□□□ -0.39
C9orf3-217ENST00000479161 CA11O75493 328 aa12.63□□□□□ -0.39
C9orf3-217ENST00000479161 BPNT1O95861 308 aa12.63□□□□□ -0.39
C9orf3-217ENST00000479161 RNASE1P07998 156 aaKnown RBP12.63□□□□□ -0.39
C9orf3-217ENST00000479161 FBP1P09467 338 aa12.63□□□□□ -0.39
C9orf3-217ENST00000479161 CGB3P0DN86 165 aa12.63□□□□□ -0.39
C9orf3-217ENST00000479161 CGB7P0DN87 165 aa12.63□□□□□ -0.39
C9orf3-217ENST00000479161 IGHV1-8P0DP01 117 aa12.63□□□□□ -0.39
C9orf3-217ENST00000479161 CCL3L1P16619 93 aa12.63□□□□□ -0.39
C9orf3-217ENST00000479161 SERPINA2P20848 420 aa12.63□□□□□ -0.39
C9orf3-217ENST00000479161 FGF9P31371 208 aaPredicted RBP12.63□□□□□ -0.39
C9orf3-217ENST00000479161 SNU13P55769 128 aaKnown RBP12.63□□□□□ -0.39
C9orf3-217ENST00000479161 UBA52P62987 128 aaKnown RBP12.63□□□□□ -0.39
C9orf3-217ENST00000479161 SCN1BQ07699 218 aa12.63□□□□□ -0.39
C9orf3-217ENST00000479161 AESQ08117 197 aa12.63□□□□□ -0.39
C9orf3-217ENST00000479161 EDDM3AQ14507 147 aa12.63□□□□□ -0.39
C9orf3-217ENST00000479161 PIGYQ3MUY2 71 aa12.63□□□□□ -0.39
C9orf3-217ENST00000479161 PAN3Q58A45 887 aaKnown RBP12.63□□□□□ -0.39
C9orf3-217ENST00000479161 KRBOX4Q5JUW0 171 aa12.63□□□□□ -0.39
C9orf3-217ENST00000479161 SLC35E4Q6ICL7 350 aa12.63□□□□□ -0.39
C9orf3-217ENST00000479161 OR52W1Q6IF63 320 aa12.63□□□□□ -0.39
C9orf3-217ENST00000479161 HEPN1Q6WQI6 88 aa12.63□□□□□ -0.39
C9orf3-217ENST00000479161 ZNF565Q8N9K5 539 aa12.63□□□□□ -0.39
C9orf3-217ENST00000479161 OR6M1Q8NGM8 313 aa12.63□□□□□ -0.39
C9orf3-217ENST00000479161 OR13D1Q8NGV5 346 aa12.63□□□□□ -0.39
C9orf3-217ENST00000479161 SSMEM1Q8WWF3 244 aa12.63□□□□□ -0.39
C9orf3-217ENST00000479161 SLC25A28Q96A46 364 aa12.63□□□□□ -0.39
C9orf3-217ENST00000479161 NR1H4Q96RI1 486 aaPredicted RBP12.63□□□□□ -0.39
C9orf3-217ENST00000479161 PPA2Q9H2U2 334 aa12.63□□□□□ -0.39
C9orf3-217ENST00000479161 FBLN5Q9UBX5 448 aa12.63□□□□□ -0.39
C9orf3-217ENST00000479161 ZNF729A6NN14 1252 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-217ENST00000479161 SLC17A2O00624 439 aa12.62□□□□□ -0.39
C9orf3-217ENST00000479161 GEMIN2O14893 280 aaKnown RBP12.62□□□□□ -0.39
C9orf3-217ENST00000479161 OR7C1O76099 320 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-217ENST00000479161 HTR2CP28335 458 aa12.62□□□□□ -0.39
C9orf3-217ENST00000479161 BAMBIQ13145 260 aa12.62□□□□□ -0.39
C9orf3-217ENST00000479161 RBM39Q14498 530 aaKnown RBP12.62□□□□□ -0.39
C9orf3-217ENST00000479161 RSBN1Q5VWQ0 802 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-217ENST00000479161 GAPTQ8N292 157 aa12.62□□□□□ -0.39
C9orf3-217ENST00000479161 SUMF2Q8NBJ7 301 aa12.62□□□□□ -0.39
C9orf3-217ENST00000479161 OR10A7Q8NGE5 316 aa12.62□□□□□ -0.39
C9orf3-217ENST00000479161 KCNG3Q8TAE7 436 aa12.62□□□□□ -0.39
C9orf3-217ENST00000479161 Q96M66 194 aa12.62□□□□□ -0.39
C9orf3-217ENST00000479161 DPCDQ9BVM2 203 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-217ENST00000479161 C19orf24Q9BVV8 132 aa12.62□□□□□ -0.39
C9orf3-217ENST00000479161 MEGF9Q9H1U4 602 aa12.62□□□□□ -0.39
C9orf3-217ENST00000479161 FAM96BQ9Y3D0 163 aa12.62□□□□□ -0.39
C9orf3-217ENST00000479161 TBL2Q9Y4P3 447 aaKnown RBP12.62□□□□□ -0.39
C9orf3-217ENST00000479161 SESN1Q9Y6P5 492 aa12.62□□□□□ -0.39
C9orf3-217ENST00000479161 A0A087X0M5 115 aa12.61□□□□□ -0.39
C9orf3-217ENST00000479161 A0A1B0GX30 115 aa12.61□□□□□ -0.39
C9orf3-217ENST00000479161 DNAJC9-AS1A6NH13 148 aa12.61□□□□□ -0.39
C9orf3-217ENST00000479161 CLPXO76031 633 aa12.61□□□□□ -0.39
C9orf3-217ENST00000479161 TNFAIP8O95379 198 aa12.61□□□□□ -0.39
C9orf3-217ENST00000479161 MGMTP16455 207 aa12.61□□□□□ -0.39
C9orf3-217ENST00000479161 GZMHP20718 246 aa12.61□□□□□ -0.39
C9orf3-217ENST00000479161 CALRP27797 417 aaKnown RBP12.61□□□□□ -0.39
C9orf3-217ENST00000479161 CD34P28906 385 aa12.61□□□□□ -0.39
C9orf3-217ENST00000479161 SAA4P35542 130 aa12.61□□□□□ -0.39
C9orf3-217ENST00000479161 GLIPR1P48060 266 aa12.61□□□□□ -0.39
C9orf3-217ENST00000479161 COMPP49747 757 aaPredicted RBP12.61□□□□□ -0.39
C9orf3-217ENST00000479161 QRFPP83859 136 aa12.61□□□□□ -0.39
C9orf3-217ENST00000479161 SLC9A3R2Q15599 337 aa12.61□□□□□ -0.39
C9orf3-217ENST00000479161 RUSC1-AS1Q66K80 236 aa12.61□□□□□ -0.39
C9orf3-217ENST00000479161 ZNF626Q68DY1 528 aa12.61□□□□□ -0.39
C9orf3-217ENST00000479161 SLC16A12Q6ZSM3 486 aa12.61□□□□□ -0.39
C9orf3-217ENST00000479161 OR2W3Q7Z3T1 314 aa12.61□□□□□ -0.39
C9orf3-217ENST00000479161 RTN4RL2Q86UN3 420 aa12.61□□□□□ -0.39
C9orf3-217ENST00000479161 BEND2Q8NDZ0 799 aa12.61□□□□□ -0.39
C9orf3-217ENST00000479161 ZDHHC16Q969W1 377 aa12.61□□□□□ -0.39
C9orf3-217ENST00000479161 TM2D1Q9BX74 207 aa12.61□□□□□ -0.39
C9orf3-217ENST00000479161 DPAGT1Q9H3H5 408 aa12.61□□□□□ -0.39
C9orf3-217ENST00000479161 A0A0U1RQK1 487 aa12.6□□□□□ -0.39
C9orf3-217ENST00000479161 KBTBD11-OT1A0A1B0GTJ5 212 aa12.6□□□□□ -0.39
C9orf3-217ENST00000479161 A0A1W2PP11 408 aa12.6□□□□□ -0.39
C9orf3-217ENST00000479161 TMEM89A2RUT3 159 aa12.6□□□□□ -0.39
C9orf3-217ENST00000479161 TMEM14DPA8MWL7 114 aa12.6□□□□□ -0.39
C9orf3-217ENST00000479161 ODF3BA8MYP8 253 aa12.6□□□□□ -0.39
C9orf3-217ENST00000479161 PDCD5O14737 125 aa12.6□□□□□ -0.39
C9orf3-217ENST00000479161 MELTFP08582 738 aa12.6□□□□□ -0.39
C9orf3-217ENST00000479161 VSIG8P0DPA2 414 aa12.6□□□□□ -0.39
C9orf3-217ENST00000479161 FUT3P21217 361 aa12.6□□□□□ -0.39
C9orf3-217ENST00000479161 IER3P46695 156 aa12.6□□□□□ -0.39
C9orf3-217ENST00000479161 TAF9Q16594 264 aa12.6□□□□□ -0.39
C9orf3-217ENST00000479161 TPRX1Q8N7U7 411 aa12.6□□□□□ -0.39
C9orf3-217ENST00000479161 TMEM104Q8NE00 496 aa12.6□□□□□ -0.39
C9orf3-217ENST00000479161 AJUBAQ96IF1 538 aa12.6□□□□□ -0.39
C9orf3-217ENST00000479161 NKX3-1Q99801 234 aaPredicted RBP12.6□□□□□ -0.39
C9orf3-217ENST00000479161 TMEM133Q9H2Q1 129 aa12.6□□□□□ -0.39
C9orf3-217ENST00000479161 ZNRD1Q9P1U0 126 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms