RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 PRSS50Q9UI38 385 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 BOKQ9UMX3 212 aaPredicted RBP9.27□□□□□ -0.93
VPS52-217ENST00000478934 DMXL1Q9Y485 3027 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 ARHGAP21Q5T5U3 1957 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 A0A1W2PPE3 182 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 ARGFXA6NJG6 315 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 CDRT15L2A8MXV6 281 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 POLR2GP62487 172 aaKnown RBP eCLIP9.27□□□□□ -0.93
VPS52-217ENST00000478934 RAB1AP62820 205 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 AWAT1Q58HT5 328 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 KRBOX4Q5JUW0 171 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 COLCA1Q6ZS62 124 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 MED12LQ86YW9 2145 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 CCDC54Q8NEL0 328 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 SPSB4Q96A44 273 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 MOB3AQ96BX8 217 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 RARRES2Q99969 163 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 REPIN1Q9BWE0 567 aaKnown RBP9.27□□□□□ -0.93
VPS52-217ENST00000478934 PARP11Q9NR21 331 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 PRR14LQ5THK1 2151 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 GTF3C1Q12789 2109 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 IGKV1-6A0A0C4DH72 117 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 PQLC2LA1A4F0 135 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 A6NLC8 198 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 E5RGE8 158 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 HSD17B6O14756 317 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 HS3ST1O14792 307 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 DVL1P1P54792 670 aaPredicted RBP9.26□□□□□ -0.93
VPS52-217ENST00000478934 HOXA4Q00056 320 aaPredicted RBP9.26□□□□□ -0.93
VPS52-217ENST00000478934 GUK1Q16774 197 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 ZNF100Q8IYN0 542 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 TMEM217Q8N7C4 229 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 DMBX1Q8NFW5 382 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 FAM213BQ8TBF2 198 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 NEK7Q8TDX7 302 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 FAM173AQ9BQD7 235 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 IER2Q9BTL4 223 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 DEFB127Q9H1M4 99 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 NSG2Q9Y328 171 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 hCG_1809904A0A1W2PP81 198 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 A0A1W2PPH5 198 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 A0A1W2PR64 198 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 A0A1W2PRV1 198 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 WISP2O76076 250 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 SNCAP37840 140 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 HERV-K104P61576 105 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 EIF5AP63241 154 aaKnown RBP9.26□□□□□ -0.93
VPS52-217ENST00000478934 PLGLB1Q02325 96 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 HABP2Q14520 560 aaPredicted RBP9.26□□□□□ -0.93
VPS52-217ENST00000478934 IZUMO4Q1ZYL8 232 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 DCAF10Q5QP82 559 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 DHRS13Q6UX07 377 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 RBMS3Q6XE24 437 aaKnown RBP9.26□□□□□ -0.93
VPS52-217ENST00000478934 ZNF818PQ6ZRF7 136 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 MRPL21Q7Z2W9 205 aaKnown RBP9.26□□□□□ -0.93
VPS52-217ENST00000478934 UBAC2Q8NBM4 344 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 CD300LFQ8TDQ1 290 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 GALNT14Q96FL9 552 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 RSRP1Q9BUV0 290 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 PRDM14Q9GZV8 571 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 RGCCQ9H4X1 137 aa9.26□□□□□ -0.93
VPS52-217ENST00000478934 EP300Q09472 2414 aaPredicted RBP9.25□□□□□ -0.93
VPS52-217ENST00000478934 SMG1Q96Q15 3661 aaKnown RBP9.25□□□□□ -0.93
VPS52-217ENST00000478934 C3orf85A0A1B0GTC6 90 aa9.25□□□□□ -0.93
VPS52-217ENST00000478934 H7C1Q1 480 aa9.25□□□□□ -0.93
VPS52-217ENST00000478934 MPPED1O15442 326 aa9.25□□□□□ -0.93
VPS52-217ENST00000478934 SSSCA1O60232 199 aa9.25□□□□□ -0.93
VPS52-217ENST00000478934 CST7O76096 145 aa9.25□□□□□ -0.93
VPS52-217ENST00000478934 GLAP06280 429 aa9.25□□□□□ -0.93
VPS52-217ENST00000478934 ZNF44P15621 663 aa9.25□□□□□ -0.93
VPS52-217ENST00000478934 ECI1P42126 302 aa9.25□□□□□ -0.93
VPS52-217ENST00000478934 CCL20P78556 96 aa9.25□□□□□ -0.93
VPS52-217ENST00000478934 CXorf66Q5JRM2 361 aaPredicted RBP9.25□□□□□ -0.93
VPS52-217ENST00000478934 TBC1D26Q86UD7 250 aa9.25□□□□□ -0.93
VPS52-217ENST00000478934 GAPTQ8N292 157 aa9.25□□□□□ -0.93
VPS52-217ENST00000478934 ZFP62Q8NB50 900 aaPredicted RBP9.25□□□□□ -0.93
VPS52-217ENST00000478934 RDH5Q92781 318 aa9.25□□□□□ -0.93
VPS52-217ENST00000478934 FAM212BQ9NTI7 297 aaPredicted RBP9.25□□□□□ -0.93
VPS52-217ENST00000478934 IL36GQ9NZH8 169 aa9.25□□□□□ -0.93
VPS52-217ENST00000478934 TTC28Q96AY4 2481 aa9.25□□□□□ -0.93
VPS52-217ENST00000478934 IGKV3D-15A0A087WSY6 115 aa9.25□□□□□ -0.93
VPS52-217ENST00000478934 NUDT19A8MXV4 375 aa9.25□□□□□ -0.93
VPS52-217ENST00000478934 RPL36A-HNRNPH2H7BZ11 118 aa9.25□□□□□ -0.93
VPS52-217ENST00000478934 LINC01387J3KSC0 135 aa9.25□□□□□ -0.93
VPS52-217ENST00000478934 RHBDL1O75783 438 aa9.25□□□□□ -0.93
VPS52-217ENST00000478934 SELEP16581 610 aa9.25□□□□□ -0.93
VPS52-217ENST00000478934 WNT5AP41221 380 aa9.25□□□□□ -0.93
VPS52-217ENST00000478934 TMEM211Q6ICI0 200 aa9.25□□□□□ -0.93
VPS52-217ENST00000478934 TMEM45BQ96B21 275 aa9.25□□□□□ -0.93
VPS52-217ENST00000478934 STRADBQ9C0K7 418 aa9.25□□□□□ -0.93
VPS52-217ENST00000478934 CCL28Q9NRJ3 127 aa9.25□□□□□ -0.93
VPS52-217ENST00000478934 C19orf12Q9NSK7 152 aa9.25□□□□□ -0.93
VPS52-217ENST00000478934 KLF2Q9Y5W3 355 aaPredicted RBP9.25□□□□□ -0.93
VPS52-217ENST00000478934 A0A1W2PPE2 198 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 C7orf77A4D0Y5 90 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 H3BP45 60 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 ST8SIA3O43173 380 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 EIF3GO75821 320 aaKnown RBP eCLIP9.24□□□□□ -0.93
VPS52-217ENST00000478934 GAPDHP04406 335 aaKnown RBP9.24□□□□□ -0.93
VPS52-217ENST00000478934 FBP1P09467 338 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms