RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 IGHG4P01861 327 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 RBP1P09455 135 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 GPR89BP0CG08 455 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 TCN1P20061 433 aaPredicted RBP3.18□□□□□ -1.9
CCDC171-207ENST00000478913 MIPP30301 263 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 SULT1E1P49888 294 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 EFNB2P52799 333 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 GABARAPL2P60520 117 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 CTAG1AP78358 180 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 MERTKQ12866 999 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 FAM83EQ2M2I3 478 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 ZNF181Q2M3W8 571 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 RFX4Q33E94 735 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 PIGGQ5H8A4 983 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 AVPI1Q5T686 147 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 ANKRD22Q5VYY1 191 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 TIGD3Q6B0B8 471 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 FAM45BPQ6NSW5 357 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 TTC23LQ6PF05 361 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 ZNF773Q6PK81 442 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 CEMP1Q6PRD7 247 aaPredicted RBP3.18□□□□□ -1.9
CCDC171-207ENST00000478913 ZYG11AQ6WRX3 759 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 TAS2R42Q7RTR8 314 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 HDDC2Q7Z4H3 204 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 SLC22A9Q8IVM8 553 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 RDH10Q8IZV5 341 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 C8orf59Q8N0T1 100 aaPredicted RBP3.18□□□□□ -1.9
CCDC171-207ENST00000478913 CCNYL1Q8N7R7 359 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 FAM45AQ8TCE6 357 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 BLOC1S5Q8TDH9 187 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 DUS3LQ96G46 650 aaKnown RBP3.18□□□□□ -1.9
CCDC171-207ENST00000478913 CEP19Q96LK0 163 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 RDH12Q96NR8 316 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 RNF157Q96PX1 679 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 ZNF607Q96SK3 696 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 RBBP8Q99708 897 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 CIB1Q99828 191 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 APOL4Q9BPW4 351 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 RASL11BQ9BPW5 248 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 NRIP2Q9BQI9 281 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 OSBPL10Q9BXB5 764 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 SHCBP1LQ9BZQ2 653 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 CYP3A43Q9HB55 503 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 RAB18Q9NP72 206 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 CCNB1IP1Q9NPC3 277 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 SMPD3Q9NY59 655 aaPredicted RBP3.18□□□□□ -1.9
CCDC171-207ENST00000478913 EXTL2Q9UBQ6 330 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 STAP1Q9ULZ2 295 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 CLEC4AQ9UMR7 237 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 ACOT9Q9Y305 439 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 TPRKBQ9Y3C4 175 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 DOCK11Q5JSL3 2073 aa3.18□□□□□ -1.9
CCDC171-207ENST00000478913 TRAV40A0A0B4J280 105 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 A6NDX4 124 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 CENPXA8MT69 81 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 M0QYV0 167 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 MAGEB3O15480 346 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 MYO1DO94832 1006 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 PTTG1O95997 202 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 NPPAP01160 153 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 C1QAP02745 245 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 S100A6P06703 90 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 ERCC1P07992 297 aaPredicted RBP3.17□□□□□ -1.9
CCDC171-207ENST00000478913 GIPP09681 153 aaPredicted RBP3.17□□□□□ -1.9
CCDC171-207ENST00000478913 HSMCR30P0CW71 290 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 HSD17B2P37059 387 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 MAP3K8P41279 467 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 KIR2DS4P43632 304 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 ETV1P50549 477 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 ZNF83P51522 516 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 SLC25A11Q02978 314 aaKnown RBP3.17□□□□□ -1.9
CCDC171-207ENST00000478913 TGFBIQ15582 683 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 NEDD8Q15843 81 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 BCL2A1Q16548 175 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 COQ5Q5HYK3 327 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 C1orf220Q5T0J3 134 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 STEAP4Q687X5 459 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 ANKRD26P1Q6NSI1 321 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 TMIGD1Q6UXZ0 262 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 PSTKQ8IV42 348 aaKnown RBP3.17□□□□□ -1.9
CCDC171-207ENST00000478913 TMEM123Q8N131 208 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 C6orf223Q8N319 242 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 CBR4Q8N4T8 237 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 Q8N9W7 124 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 OR10G3Q8NGC4 313 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 OR4K14Q8NGD5 310 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 FANK1Q8TC84 345 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 AGR3Q8TD06 166 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 CAPSLQ8WWF8 208 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 RORBQ92753 470 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 SLC35B4Q969S0 331 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 CERS2Q96G23 380 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 AURKBQ96GD4 344 aaPredicted RBP3.17□□□□□ -1.9
CCDC171-207ENST00000478913 QKIQ96PU8 341 aaKnown RBP eCLIP3.17□□□□□ -1.9
CCDC171-207ENST00000478913 ZBTB18Q99592 522 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 DOK1Q99704 481 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 KCTD14Q9BQ13 255 aaPredicted RBP3.17□□□□□ -1.9
CCDC171-207ENST00000478913 MRPL57Q9BQC6 102 aaKnown RBP3.17□□□□□ -1.9
CCDC171-207ENST00000478913 CHRDL1Q9BU40 450 aa3.17□□□□□ -1.9
CCDC171-207ENST00000478913 ZSCAN5AQ9BUG6 496 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms