RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 ZFPL1O95159 310 aa11.56□□□□□ -0.56
SMARCE1-209ENST00000478349 NFYBP25208 207 aa11.56□□□□□ -0.56
SMARCE1-209ENST00000478349 LOXL3P58215 753 aa11.56□□□□□ -0.56
SMARCE1-209ENST00000478349 PPP3R1P63098 170 aa11.56□□□□□ -0.56
SMARCE1-209ENST00000478349 CD83Q01151 205 aa11.56□□□□□ -0.56
SMARCE1-209ENST00000478349 RSU1Q15404 277 aa11.56□□□□□ -0.56
SMARCE1-209ENST00000478349 TMEM95Q3KNT9 176 aa11.56□□□□□ -0.56
SMARCE1-209ENST00000478349 ABCA11PQ4W5N1 156 aa11.56□□□□□ -0.56
SMARCE1-209ENST00000478349 OXLD1Q5BKU9 147 aa11.56□□□□□ -0.56
SMARCE1-209ENST00000478349 ELP2Q6IA86 826 aa11.56□□□□□ -0.56
SMARCE1-209ENST00000478349 CCDC121Q6ZUS5 278 aa11.56□□□□□ -0.56
SMARCE1-209ENST00000478349 LHFPL3Q86UP9 236 aa11.56□□□□□ -0.56
SMARCE1-209ENST00000478349 OR51T1Q8NGJ9 327 aa11.56□□□□□ -0.56
SMARCE1-209ENST00000478349 OR10AC1Q8NH08 325 aa11.56□□□□□ -0.56
SMARCE1-209ENST00000478349 S100A13Q99584 98 aa11.56□□□□□ -0.56
SMARCE1-209ENST00000478349 FAM192AQ9GZU8 254 aa11.56□□□□□ -0.56
SMARCE1-209ENST00000478349 ZNF286AQ9HBT8 521 aa11.56□□□□□ -0.56
SMARCE1-209ENST00000478349 PAK1IP1Q9NWT1 392 aaPredicted RBP11.56□□□□□ -0.56
SMARCE1-209ENST00000478349 ING3Q9NXR8 418 aa11.56□□□□□ -0.56
SMARCE1-209ENST00000478349 MOB4Q9Y3A3 225 aa11.56□□□□□ -0.56
SMARCE1-209ENST00000478349 HSPE1-MOB4S4R3N1 261 aa11.56□□□□□ -0.56
SMARCE1-209ENST00000478349 IRGMA1A4Y4 181 aa11.55□□□□□ -0.56
SMARCE1-209ENST00000478349 FAM172BPA6NC97 362 aa11.55□□□□□ -0.56
SMARCE1-209ENST00000478349 IL1AP01583 271 aa11.55□□□□□ -0.56
SMARCE1-209ENST00000478349 LPLP06858 475 aa11.55□□□□□ -0.56
SMARCE1-209ENST00000478349 JUNBP17275 347 aaPredicted RBP11.55□□□□□ -0.56
SMARCE1-209ENST00000478349 RAB7AP51149 207 aa11.55□□□□□ -0.56
SMARCE1-209ENST00000478349 ZP1P60852 638 aa11.55□□□□□ -0.56
SMARCE1-209ENST00000478349 MADCAM1Q13477 382 aa11.55□□□□□ -0.56
SMARCE1-209ENST00000478349 MED21Q13503 144 aa11.55□□□□□ -0.56
SMARCE1-209ENST00000478349 Q6P435 159 aa11.55□□□□□ -0.56
SMARCE1-209ENST00000478349 Q6ZPA2 131 aa11.55□□□□□ -0.56
SMARCE1-209ENST00000478349 SLC16A12Q6ZSM3 486 aa11.55□□□□□ -0.56
SMARCE1-209ENST00000478349 THNSL2Q86YJ6 484 aa11.55□□□□□ -0.56
SMARCE1-209ENST00000478349 OR10A7Q8NGE5 316 aa11.55□□□□□ -0.56
SMARCE1-209ENST00000478349 OR51D1Q8NGF3 324 aa11.55□□□□□ -0.56
SMARCE1-209ENST00000478349 GPR148Q8TDV2 347 aa11.55□□□□□ -0.56
SMARCE1-209ENST00000478349 TNFAIP8L1Q8WVP5 186 aa11.55□□□□□ -0.56
SMARCE1-209ENST00000478349 DPF1Q92782 380 aa11.55□□□□□ -0.56
SMARCE1-209ENST00000478349 PHF21AQ96BD5 680 aa11.55□□□□□ -0.56
SMARCE1-209ENST00000478349 COQ2Q96H96 371 aa11.55□□□□□ -0.56
SMARCE1-209ENST00000478349 RCC1LQ96I51 464 aaKnown RBP11.55□□□□□ -0.56
SMARCE1-209ENST00000478349 KIRREL1Q96J84 757 aa11.55□□□□□ -0.56
SMARCE1-209ENST00000478349 ERVK13-1Q9NX77 482 aa11.55□□□□□ -0.56
SMARCE1-209ENST00000478349 CALYQ9NYX4 217 aa11.55□□□□□ -0.56
SMARCE1-209ENST00000478349 ADARB2-AS1A8MUL3 147 aa11.54□□□□□ -0.56
SMARCE1-209ENST00000478349 HSPB6O14558 160 aa11.54□□□□□ -0.56
SMARCE1-209ENST00000478349 CSTBP04080 98 aaKnown RBP11.54□□□□□ -0.56
SMARCE1-209ENST00000478349 PAX5Q02548 391 aa11.54□□□□□ -0.56
SMARCE1-209ENST00000478349 CCDC58Q4VC31 144 aa11.54□□□□□ -0.56
SMARCE1-209ENST00000478349 C9orf152Q5JTZ5 239 aa11.54□□□□□ -0.56
SMARCE1-209ENST00000478349 LPCAT4Q643R3 524 aa11.54□□□□□ -0.56
SMARCE1-209ENST00000478349 HIST2H2BDQ6DRA6 164 aa11.54□□□□□ -0.56
SMARCE1-209ENST00000478349 TMPRSS11AQ6ZMR5 421 aa11.54□□□□□ -0.56
SMARCE1-209ENST00000478349 LINC00596Q86U02 117 aa11.54□□□□□ -0.56
SMARCE1-209ENST00000478349 SATL1Q86VE3 508 aa11.54□□□□□ -0.56
SMARCE1-209ENST00000478349 OR8H3Q8N146 312 aa11.54□□□□□ -0.56
SMARCE1-209ENST00000478349 OSR2Q8N2R0 312 aa11.54□□□□□ -0.56
SMARCE1-209ENST00000478349 ZNF555Q8NEP9 628 aa11.54□□□□□ -0.56
SMARCE1-209ENST00000478349 WFDC9Q8NEX5 89 aa11.54□□□□□ -0.56
SMARCE1-209ENST00000478349 RHOXF1Q8NHV9 184 aa11.54□□□□□ -0.56
SMARCE1-209ENST00000478349 CNIH3Q8TBE1 160 aa11.54□□□□□ -0.56
SMARCE1-209ENST00000478349 NR1H4Q96RI1 486 aaPredicted RBP11.54□□□□□ -0.56
SMARCE1-209ENST00000478349 RAB9BQ9NP90 201 aa11.54□□□□□ -0.56
SMARCE1-209ENST00000478349 FAM118AQ9NWS6 357 aa11.54□□□□□ -0.56
SMARCE1-209ENST00000478349 IDI2-AS1Q9NZ38 188 aa11.54□□□□□ -0.56
SMARCE1-209ENST00000478349 KIF25Q9UIL4 384 aa11.54□□□□□ -0.56
SMARCE1-209ENST00000478349 H3BNX3 289 aa11.53□□□□□ -0.56
SMARCE1-209ENST00000478349 ZNF780AO75290 641 aaPredicted RBP11.53□□□□□ -0.56
SMARCE1-209ENST00000478349 CD24P25063 80 aa11.53□□□□□ -0.56
SMARCE1-209ENST00000478349 SLC6A1P30531 599 aa11.53□□□□□ -0.56
SMARCE1-209ENST00000478349 HES1Q14469 280 aa11.53□□□□□ -0.56
SMARCE1-209ENST00000478349 CDK5R1Q15078 307 aa11.53□□□□□ -0.56
SMARCE1-209ENST00000478349 RPL22L1Q6P5R6 122 aaKnown RBP11.53□□□□□ -0.56
SMARCE1-209ENST00000478349 Q6ZS46 218 aa11.53□□□□□ -0.56
SMARCE1-209ENST00000478349 OR10X1Q8NGY0 326 aa11.53□□□□□ -0.56
SMARCE1-209ENST00000478349 MYDGFQ969H8 173 aa11.53□□□□□ -0.56
SMARCE1-209ENST00000478349 PDCD1LG2Q9BQ51 273 aa11.53□□□□□ -0.56
SMARCE1-209ENST00000478349 JAM3Q9BX67 310 aa11.53□□□□□ -0.56
SMARCE1-209ENST00000478349 METTL9Q9H1A3 318 aa11.53□□□□□ -0.56
SMARCE1-209ENST00000478349 PPIL3Q9H2H8 161 aaKnown RBP11.53□□□□□ -0.56
SMARCE1-209ENST00000478349 ISG20L2Q9H9L3 353 aaKnown RBP11.53□□□□□ -0.56
SMARCE1-209ENST00000478349 CKLFQ9UBR5 152 aa11.53□□□□□ -0.56
SMARCE1-209ENST00000478349 LOC100130705A0A1B0GUX0 176 aa11.52□□□□□ -0.57
SMARCE1-209ENST00000478349 PSMB11A5LHX3 300 aa11.52□□□□□ -0.57
SMARCE1-209ENST00000478349 E9PQ18 207 aa11.52□□□□□ -0.57
SMARCE1-209ENST00000478349 LY6LH3BQJ8 138 aa11.52□□□□□ -0.57
SMARCE1-209ENST00000478349 J3QR06 171 aa11.52□□□□□ -0.57
SMARCE1-209ENST00000478349 GABRPO00591 440 aa11.52□□□□□ -0.57
SMARCE1-209ENST00000478349 FGF16O43320 207 aa11.52□□□□□ -0.57
SMARCE1-209ENST00000478349 PRB2P02812 416 aaPredicted RBP11.52□□□□□ -0.57
SMARCE1-209ENST00000478349 TMEM11P17152 192 aa11.52□□□□□ -0.57
SMARCE1-209ENST00000478349 GABRB1P18505 474 aa11.52□□□□□ -0.57
SMARCE1-209ENST00000478349 MYL12AP19105 171 aa11.52□□□□□ -0.57
SMARCE1-209ENST00000478349 IL3RAP26951 378 aa11.52□□□□□ -0.57
SMARCE1-209ENST00000478349 SLC35B1P78383 322 aa11.52□□□□□ -0.57
SMARCE1-209ENST00000478349 DCTN2Q13561 401 aaKnown RBP11.52□□□□□ -0.57
SMARCE1-209ENST00000478349 ZSCAN26Q16670 478 aa11.52□□□□□ -0.57
SMARCE1-209ENST00000478349 C17orf58Q2M2W7 97 aa11.52□□□□□ -0.57
SMARCE1-209ENST00000478349 BAIAP2L2Q6UXY1 529 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms