RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 ZNF736B4DX44 427 aaPredicted RBP5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 CXCR6O00574 342 aa5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 ARPC1BO15143 372 aaKnown RBP5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 SOX15O60248 233 aa5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 DHRS3O75911 302 aa5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 INMTO95050 263 aa5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 DIRAS1O95057 198 aa5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 MOSP00540 346 aa5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 GAPDHP04406 335 aaKnown RBP5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 LYNP07948 512 aa5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 CDC42P60953 191 aa5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 VSNL1P62760 191 aa5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 TNFRSF9Q07011 255 aa5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 TSPAN31Q12999 210 aa5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 LSAMPQ13449 338 aa5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 ENTHD1Q8IYW4 607 aa5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 OR8H1Q8NGG4 311 aa5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 OR52L1Q8NGH7 329 aa5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 OTOSQ8NHW6 89 aa5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 EMG1Q92979 244 aaKnown RBP5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 SLAMF9Q96A28 289 aa5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 CADM1Q9BY67 442 aaKnown RBP5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 LINC00574Q9H8X3 128 aa5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 IL20Q9NYY1 176 aa5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 MRM2Q9UI43 246 aaKnown RBP5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 ZNF107Q9UII5 783 aaPredicted RBP5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 KIAA2026Q5HYC2 2103 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 A0A0J9YWU9 116 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 TMEM269A0A1B0GVZ9 245 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 FUOMA2VDF0 154 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 IZUMO1RA6ND01 250 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 A6NIN4 97 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 HSD17B6O14756 317 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 ENTPD6O75354 484 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 H2AFXP16104 143 aaPredicted RBP5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 CD1BP29016 333 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 NPBWR2P48146 333 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 REG1BP48304 166 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 RPL11P62913 178 aaKnown RBP5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 RAB40BQ12829 278 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 KLF5Q13887 457 aaPredicted RBP5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 C19orf54Q5BKX5 351 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 COQ5Q5HYK3 327 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 TOR2AQ5JU69 321 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 SLC25A26Q70HW3 274 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 COMMD2Q86X83 199 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 DEFB125Q8N687 156 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 OR8D4Q8NGM9 314 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 THEM6Q8WUY1 208 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 STON2Q8WXE9 905 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 RGP1Q92546 391 aaPredicted RBP5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 COQ2Q96H96 371 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 OSBPL10Q9BXB5 764 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 PBOV1Q9GZY1 135 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 MRPL18Q9H0U6 180 aaKnown RBP5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 RBFOX1Q9NWB1 397 aaKnown RBP5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 CMTM6Q9NX76 183 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 ING3Q9NXR8 418 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 OR6C3Q9NZP0 311 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 KLHDC2Q9Y2U9 406 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 FBXO7Q9Y3I1 522 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 CDH10Q9Y6N8 788 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 DNAH17Q9UFH2 4485 aa5.53□□□□□ -1.52
SPTLC1-205ENST00000477888 DSCAML1Q8TD84 2053 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 PKD1P98161 4303 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 TRAV41A0A0B4J266 112 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 TRBV2A0A0J9YWF9 115 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 A0A1W2PPE3 182 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 FAM230AA0A1W2PPH8 454 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 NPIPB11E5RHQ5 1161 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 ZNF561-AS1K7EIQ3 104 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 SIRPB1O00241 398 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 ATP6V0E1O15342 81 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 TUSC2O75896 110 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 TPPPO94811 219 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 OR2H2O95918 312 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 CSN2P05814 226 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 CALCBP10092 127 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 OSMP13725 252 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 CD81P60033 236 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 SPIN3Q5JUX0 258 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 LCN12Q6JVE5 192 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 RPL13AP3Q6NVV1 102 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 SLC16A12Q6ZSM3 486 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 Q6ZSR3 168 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 SLC15A3Q8IY34 581 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 Q8IYB0 196 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 FAM58AQ8N1B3 248 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 Q8N402 240 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 OR9G4Q8NGQ1 327 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 OR10X1Q8NGY0 326 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 OR14K1Q8NGZ2 314 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 RP9Q8TA86 221 aaKnown RBP5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 GNPDA2Q8TDQ7 276 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 CASTOR1Q8WTX7 329 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 NEURL2Q9BR09 285 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 JAM3Q9BX67 310 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 ZCCHC4Q9H5U6 513 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 PLEKHA1Q9HB21 404 aa5.52□□□□□ -1.53
SPTLC1-205ENST00000477888 IDI2-AS1Q9NZ38 188 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms