RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 NOTOA8MTQ0 251 aa7.82□□□□□ -1.16
SMARCB1-206ENST00000477836 MAS1P04201 325 aa7.82□□□□□ -1.16
SMARCB1-206ENST00000477836 IGFBP3P17936 291 aaPredicted RBP7.82□□□□□ -1.16
SMARCB1-206ENST00000477836 ACKR3P25106 362 aa7.82□□□□□ -1.16
SMARCB1-206ENST00000477836 OR10A3P58181 314 aa7.82□□□□□ -1.16
SMARCB1-206ENST00000477836 CNN3Q15417 329 aaKnown RBP7.82□□□□□ -1.16
SMARCB1-206ENST00000477836 TMEM95Q3KNT9 176 aa7.82□□□□□ -1.16
SMARCB1-206ENST00000477836 FBXW12Q6X9E4 464 aa7.82□□□□□ -1.16
SMARCB1-206ENST00000477836 UTS2BQ765I0 119 aa7.82□□□□□ -1.16
SMARCB1-206ENST00000477836 LRRTM1Q86UE6 522 aa7.82□□□□□ -1.16
SMARCB1-206ENST00000477836 CSNK2A3Q8NEV1 391 aa7.82□□□□□ -1.16
SMARCB1-206ENST00000477836 OR1M1Q8NGA1 313 aa7.82□□□□□ -1.16
SMARCB1-206ENST00000477836 OR51A2Q8NGJ7 313 aa7.82□□□□□ -1.16
SMARCB1-206ENST00000477836 PRR25Q96S07 402 aa7.82□□□□□ -1.16
SMARCB1-206ENST00000477836 PAPOLGQ9BWT3 736 aaKnown RBP7.82□□□□□ -1.16
SMARCB1-206ENST00000477836 BARHL1Q9BZE3 327 aa7.82□□□□□ -1.16
SMARCB1-206ENST00000477836 PRSS22Q9GZN4 317 aa7.82□□□□□ -1.16
SMARCB1-206ENST00000477836 C6orf62Q9GZU0 229 aaPredicted RBP7.82□□□□□ -1.16
SMARCB1-206ENST00000477836 MEGF9Q9H1U4 602 aa7.82□□□□□ -1.16
SMARCB1-206ENST00000477836 NEK6Q9HC98 313 aa7.82□□□□□ -1.16
SMARCB1-206ENST00000477836 TMEM138Q9NPI0 162 aa7.82□□□□□ -1.16
SMARCB1-206ENST00000477836 AK6Q9Y3D8 172 aaKnown RBP7.82□□□□□ -1.16
SMARCB1-206ENST00000477836 TSSC4Q9Y5U2 329 aaPredicted RBP7.82□□□□□ -1.16
SMARCB1-206ENST00000477836 A0A1B0GW55 424 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 IFITM5A6NNB3 132 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 ANKRD30BLA7E2S9 258 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 CD300LBA8K4G0 201 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 IQCF6A8MYZ5 107 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 AIPO00170 330 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 MAGEB3O15480 346 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 SYNGR1O43759 233 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 HCKP08631 526 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 DUX4L2P0CJ85 424 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 DUX4L3P0CJ86 424 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 DUX4L4P0CJ87 422 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 DUX4L5P0CJ88 424 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 DUX4L6P0CJ89 424 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 DUX4L7P0CJ90 424 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 BDKRB2P30411 391 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 DDOSTP39656 456 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 VDAC2P45880 294 aaPredicted RBP7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 PSMD7P51665 324 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 CAV3P56539 151 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 AANATQ16613 207 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 KHDC1LQ5JSQ8 128 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 CLVS2Q5SYC1 327 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 IDNKQ5T6J7 187 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 DDI2Q5TDH0 399 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 PLCXD3Q63HM9 321 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 GLT8D1Q68CQ7 371 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 NCR3LG1Q68D85 454 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 ZNF529Q6P280 563 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 DUX4L9Q6RFH8 374 aaPredicted RBP7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 NR2C2APQ86WQ0 139 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 FAM90A1Q86YD7 464 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 MRPL41Q8IXM3 137 aaKnown RBP7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 JAGN1Q8N5M9 183 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 CELF2-AS1Q8N7Q2 184 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 DNAAF1Q8NEP3 725 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 PIFOQ8TCI5 191 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 ACOT12Q8WYK0 555 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 SPSB1Q96BD6 273 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 KCTD12Q96CX2 325 aaKnown RBP7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 CPNE2Q96FN4 548 aaPredicted RBP7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 AJUBAQ96IF1 538 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 TSC22D3Q99576 134 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 MCRIP2Q9BUT9 160 aaKnown RBP7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 PLGRKTQ9HBL7 147 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 DUX4Q9UBX2 424 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 DAPK2Q9UIK4 370 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 A3GALT2U3KPV4 340 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 V9GY05 133 aa7.81□□□□□ -1.16
SMARCB1-206ENST00000477836 IGHV3OR15-7A0A075B7D8 119 aa7.8□□□□□ -1.16
SMARCB1-206ENST00000477836 RAMP3O60896 148 aa7.8□□□□□ -1.16
SMARCB1-206ENST00000477836 TMEM127O75204 238 aa7.8□□□□□ -1.16
SMARCB1-206ENST00000477836 JTBO76095 146 aa7.8□□□□□ -1.16
SMARCB1-206ENST00000477836 PRKACBP22694 351 aa7.8□□□□□ -1.16
SMARCB1-206ENST00000477836 AZGP1P25311 298 aaKnown RBP7.8□□□□□ -1.16
SMARCB1-206ENST00000477836 CHATP28329 748 aa7.8□□□□□ -1.16
SMARCB1-206ENST00000477836 S100A5P33763 92 aa7.8□□□□□ -1.16
SMARCB1-206ENST00000477836 CD200P41217 278 aa7.8□□□□□ -1.16
SMARCB1-206ENST00000477836 RAB11BQ15907 218 aa7.8□□□□□ -1.16
SMARCB1-206ENST00000477836 HES5Q5TA89 166 aa7.8□□□□□ -1.16
SMARCB1-206ENST00000477836 TMEM42Q69YG0 159 aa7.8□□□□□ -1.16
SMARCB1-206ENST00000477836 MZT2AQ6P582 158 aa7.8□□□□□ -1.16
SMARCB1-206ENST00000477836 Q6ZS46 218 aa7.8□□□□□ -1.16
SMARCB1-206ENST00000477836 TMEM219Q86XT9 240 aa7.8□□□□□ -1.16
SMARCB1-206ENST00000477836 ZDHHC23Q8IYP9 409 aa7.8□□□□□ -1.16
SMARCB1-206ENST00000477836 OR6M1Q8NGM8 313 aa7.8□□□□□ -1.16
SMARCB1-206ENST00000477836 ZNF671Q8TAW3 534 aa7.8□□□□□ -1.16
SMARCB1-206ENST00000477836 FOXRED1Q96CU9 486 aaPredicted RBP7.8□□□□□ -1.16
SMARCB1-206ENST00000477836 GFI1Q99684 422 aa7.8□□□□□ -1.16
SMARCB1-206ENST00000477836 ABCB9Q9NP78 766 aa7.8□□□□□ -1.16
SMARCB1-206ENST00000477836 GPR173Q9NS66 373 aa7.8□□□□□ -1.16
SMARCB1-206ENST00000477836 KAAG1Q9UBP8 84 aa7.8□□□□□ -1.16
SMARCB1-206ENST00000477836 A0A075B6Q4 140 aa7.79□□□□□ -1.16
SMARCB1-206ENST00000477836 A0A1B0GWJ7 208 aa7.79□□□□□ -1.16
SMARCB1-206ENST00000477836 F2RL2O00254 374 aa7.79□□□□□ -1.16
SMARCB1-206ENST00000477836 SLC17A2O00624 439 aa7.79□□□□□ -1.16
SMARCB1-206ENST00000477836 RGS5O15539 181 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms