RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 TRAV18A0A075B6X5 111 aa13.43□□□□□ -0.26
VHL-203ENST00000477538 MFNGO00587 321 aa13.43□□□□□ -0.26
VHL-203ENST00000477538 XRCC3O43542 346 aa13.43□□□□□ -0.26
VHL-203ENST00000477538 CSN2P05814 226 aa13.43□□□□□ -0.26
VHL-203ENST00000477538 GNB3P16520 340 aa13.43□□□□□ -0.26
VHL-203ENST00000477538 FLNAP21333 2647 aaKnown RBP13.43□□□□□ -0.26
VHL-203ENST00000477538 TALDO1P37837 337 aa13.43□□□□□ -0.26
VHL-203ENST00000477538 EDDM3AQ14507 147 aa13.43□□□□□ -0.26
VHL-203ENST00000477538 ARL6IP1Q15041 203 aa13.43□□□□□ -0.26
VHL-203ENST00000477538 TMEM69Q5SWH9 247 aa13.43□□□□□ -0.26
VHL-203ENST00000477538 OR6Q1Q8NGQ2 317 aa13.43□□□□□ -0.26
VHL-203ENST00000477538 PLPPR1Q8TBJ4 325 aa13.43□□□□□ -0.26
VHL-203ENST00000477538 DYRK2Q92630 601 aa13.43□□□□□ -0.26
VHL-203ENST00000477538 DIRAS2Q96HU8 199 aa13.43□□□□□ -0.26
VHL-203ENST00000477538 ZMAT3Q9HA38 289 aaKnown RBP13.43□□□□□ -0.26
VHL-203ENST00000477538 ING3Q9NXR8 418 aa13.43□□□□□ -0.26
VHL-203ENST00000477538 ETAA1Q9NY74 926 aa13.43□□□□□ -0.26
VHL-203ENST00000477538 ABCA1O95477 2261 aa13.43□□□□□ -0.26
VHL-203ENST00000477538 PHF1O43189 567 aaPredicted RBP13.42□□□□□ -0.26
VHL-203ENST00000477538 GSTP1P09211 210 aaKnown RBP13.42□□□□□ -0.26
VHL-203ENST00000477538 TNFSF8P32971 234 aa13.42□□□□□ -0.26
VHL-203ENST00000477538 EDDM3BP56851 147 aa13.42□□□□□ -0.26
VHL-203ENST00000477538 TAS2R20P59543 309 aa13.42□□□□□ -0.26
VHL-203ENST00000477538 AESQ08117 197 aa13.42□□□□□ -0.26
VHL-203ENST00000477538 MADCAM1Q13477 382 aa13.42□□□□□ -0.26
VHL-203ENST00000477538 ZNF260Q3ZCT1 412 aa13.42□□□□□ -0.26
VHL-203ENST00000477538 CDNFQ49AH0 187 aa13.42□□□□□ -0.26
VHL-203ENST00000477538 OLFML2AQ68BL7 652 aa13.42□□□□□ -0.26
VHL-203ENST00000477538 H1FXQ92522 213 aaKnown RBP13.42□□□□□ -0.26
VHL-203ENST00000477538 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.42□□□□□ -0.26
VHL-203ENST00000477538 AK3Q9UIJ7 227 aa13.42□□□□□ -0.26
VHL-203ENST00000477538 KCNK7Q9Y2U2 307 aa13.42□□□□□ -0.26
VHL-203ENST00000477538 FUOMA2VDF0 154 aa13.41□□□□□ -0.26
VHL-203ENST00000477538 TMEM235A6NFC5 223 aa13.41□□□□□ -0.26
VHL-203ENST00000477538 SERPINE3A8MV23 424 aa13.41□□□□□ -0.26
VHL-203ENST00000477538 FAM157AC9JC47 383 aa13.41□□□□□ -0.26
VHL-203ENST00000477538 GPR37O15354 613 aa13.41□□□□□ -0.26
VHL-203ENST00000477538 PAX5Q02548 391 aa13.41□□□□□ -0.26
VHL-203ENST00000477538 KRBOX4Q5JUW0 171 aa13.41□□□□□ -0.26
VHL-203ENST00000477538 RSBN1Q5VWQ0 802 aaPredicted RBP13.41□□□□□ -0.26
VHL-203ENST00000477538 TPRX1Q8N7U7 411 aa13.41□□□□□ -0.26
VHL-203ENST00000477538 MAPK1IP1LQ8NDC0 245 aa13.41□□□□□ -0.26
VHL-203ENST00000477538 COQ2Q96H96 371 aa13.41□□□□□ -0.26
VHL-203ENST00000477538 MRPS7Q9Y2R9 242 aaKnown RBP13.41□□□□□ -0.26
VHL-203ENST00000477538 CSMD1Q96PZ7 3565 aa13.4□□□□□ -0.26
VHL-203ENST00000477538 KIAA1324LA8MWY0 1029 aaPredicted RBP13.4□□□□□ -0.26
VHL-203ENST00000477538 A8MXK9 166 aa13.4□□□□□ -0.26
VHL-203ENST00000477538 CA11O75493 328 aa13.4□□□□□ -0.26
VHL-203ENST00000477538 FOXH1O75593 365 aa13.4□□□□□ -0.26
VHL-203ENST00000477538 ERP29P30040 261 aaKnown RBP13.4□□□□□ -0.26
VHL-203ENST00000477538 MNDAP41218 407 aa13.4□□□□□ -0.26
VHL-203ENST00000477538 GLIPR1P48060 266 aa13.4□□□□□ -0.26
VHL-203ENST00000477538 P2RX3P56373 397 aa13.4□□□□□ -0.26
VHL-203ENST00000477538 LCN2P80188 198 aa13.4□□□□□ -0.26
VHL-203ENST00000477538 ARFRP1Q13795 201 aa13.4□□□□□ -0.26
VHL-203ENST00000477538 PNLIPRP3Q17RR3 467 aa13.4□□□□□ -0.26
VHL-203ENST00000477538 SLC35E4Q6ICL7 350 aa13.4□□□□□ -0.26
VHL-203ENST00000477538 BAIAP2L2Q6UXY1 529 aa13.4□□□□□ -0.26
VHL-203ENST00000477538 ZNF497Q6ZNH5 498 aa13.4□□□□□ -0.26
VHL-203ENST00000477538 BTN2A1Q7KYR7 527 aa13.4□□□□□ -0.26
VHL-203ENST00000477538 CMSS1Q9BQ75 279 aaKnown RBP13.4□□□□□ -0.26
VHL-203ENST00000477538 AUNIPQ9H7T9 357 aa13.4□□□□□ -0.26
VHL-203ENST00000477538 KIF25Q9UIL4 384 aa13.4□□□□□ -0.26
VHL-203ENST00000477538 ELF5Q9UKW6 265 aaPredicted RBP13.4□□□□□ -0.26
VHL-203ENST00000477538 LOC105371242A0A075B767 164 aa13.39□□□□□ -0.27
VHL-203ENST00000477538 TMEM30CPA0ZSE6 113 aa13.39□□□□□ -0.27
VHL-203ENST00000477538 CYSRT1A8MQ03 144 aa13.39□□□□□ -0.27
VHL-203ENST00000477538 H7C1Q1 480 aa13.39□□□□□ -0.27
VHL-203ENST00000477538 ECDO95905 644 aaPredicted RBP13.39□□□□□ -0.27
VHL-203ENST00000477538 CD3GP09693 182 aa13.39□□□□□ -0.27
VHL-203ENST00000477538 PTHLHP12272 177 aa13.39□□□□□ -0.27
VHL-203ENST00000477538 ZFP36P26651 326 aaKnown RBP13.39□□□□□ -0.27
VHL-203ENST00000477538 GNG2P59768 71 aa13.39□□□□□ -0.27
VHL-203ENST00000477538 RPL31P62899 125 aaKnown RBP13.39□□□□□ -0.27
VHL-203ENST00000477538 MRPS15P82914 257 aaKnown RBP13.39□□□□□ -0.27
VHL-203ENST00000477538 C11orf91Q3C1V1 193 aa13.39□□□□□ -0.27
VHL-203ENST00000477538 HACD4Q5VWC8 232 aa13.39□□□□□ -0.27
VHL-203ENST00000477538 CD276Q5ZPR3 534 aa13.39□□□□□ -0.27
VHL-203ENST00000477538 CCDC190Q86UF4 302 aa13.39□□□□□ -0.27
VHL-203ENST00000477538 SNX29P2Q8IUI4 249 aa13.39□□□□□ -0.27
VHL-203ENST00000477538 HDHD3Q9BSH5 251 aaPredicted RBP13.39□□□□□ -0.27
VHL-203ENST00000477538 DCTN5Q9BTE1 182 aa13.39□□□□□ -0.27
VHL-203ENST00000477538 C19orf12Q9NSK7 152 aa13.39□□□□□ -0.27
VHL-203ENST00000477538 MEIKINA0A087WXM9 373 aa13.38□□□□□ -0.27
VHL-203ENST00000477538 TRBV23-1A0A0A0MS06 115 aa13.38□□□□□ -0.27
VHL-203ENST00000477538 A0A0G2JMP0 313 aa13.38□□□□□ -0.27
VHL-203ENST00000477538 A0A0X1KG70 313 aa13.38□□□□□ -0.27
VHL-203ENST00000477538 ODAMA1E959 279 aa13.38□□□□□ -0.27
VHL-203ENST00000477538 FABP12A6NFH5 140 aa13.38□□□□□ -0.27
VHL-203ENST00000477538 C22orf46C9J442 243 aa13.38□□□□□ -0.27
VHL-203ENST00000477538 TPPPO94811 219 aa13.38□□□□□ -0.27
VHL-203ENST00000477538 NAPSAO96009 420 aa13.38□□□□□ -0.27
VHL-203ENST00000477538 HLA-DQB1P01920 261 aa13.38□□□□□ -0.27
VHL-203ENST00000477538 MT-ND4P03905 459 aa13.38□□□□□ -0.27
VHL-203ENST00000477538 MELTFP08582 738 aa13.38□□□□□ -0.27
VHL-203ENST00000477538 IL18Q14116 193 aa13.38□□□□□ -0.27
VHL-203ENST00000477538 SPANXN2Q5MJ10 180 aa13.38□□□□□ -0.27
VHL-203ENST00000477538 LINC00299Q6ZSB3 139 aa13.38□□□□□ -0.27
VHL-203ENST00000477538 FAM185AQ8N0U4 392 aa13.38□□□□□ -0.27
VHL-203ENST00000477538 GAPTQ8N292 157 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms