RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 CBR4Q8N4T8 237 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 TMEM86BQ8N661 226 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 C15orf54Q8N8G6 183 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 GATD1Q8NB37 220 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 OR5AP2Q8NGF4 316 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 OR6T1Q8NGN1 323 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 OR13J1Q8NGT2 312 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 OR2G2Q8NGZ5 317 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 OR4L1Q8NH43 312 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 OR13C6PQ8NH95 151 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 OLIG1Q8TAK6 271 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 CD99L2Q8TCZ2 262 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 LRRC15Q8TF66 581 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 FAM151AQ8WW52 585 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 DYRK2Q92630 601 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 MRPS31Q92665 395 aaKnown RBP1.99□□□□□ -2.09
XRN1-211ENST00000477237 HIST1H2ACQ93077 130 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 IL22RA2Q969J5 263 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 ARL11Q969Q4 196 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 CLDN23Q96B33 292 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 MRPS24Q96EL2 167 aaKnown RBP1.99□□□□□ -2.09
XRN1-211ENST00000477237 GALNT14Q96FL9 552 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 IMP4Q96G21 291 aaKnown RBP1.99□□□□□ -2.09
XRN1-211ENST00000477237 HYLS1Q96M11 299 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 CCDC115Q96NT0 180 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 OXGR1Q96P68 337 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 RNF157Q96PX1 679 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 CDX2Q99626 313 aaPredicted RBP1.99□□□□□ -2.09
XRN1-211ENST00000477237 NRIP2Q9BQI9 281 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 DOHHQ9BU89 302 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 RSPO3Q9BXY4 272 aaPredicted RBP1.99□□□□□ -2.09
XRN1-211ENST00000477237 EBPLQ9BY08 206 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 PITPNM3Q9BZ71 974 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 OR11A1Q9GZK7 315 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 MAP1LC3AQ9H492 121 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 TUBB1Q9H4B7 451 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 IKZF5Q9H5V7 419 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 PRORYQ9H606 182 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 CWH43Q9H720 699 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 TBC1D17Q9HA65 648 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 NMRAL1Q9HBL8 299 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 ACKR4Q9NPB9 350 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 ACP6Q9NPH0 428 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 B3GAT2Q9NPZ5 323 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 PHPT1Q9NRX4 125 aaPredicted RBP1.99□□□□□ -2.09
XRN1-211ENST00000477237 SPANXB1Q9NS25 103 aaPredicted RBP1.99□□□□□ -2.09
XRN1-211ENST00000477237 SCN3BQ9NY72 215 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 SIGLEC8Q9NYZ4 499 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 IL36GQ9NZH8 169 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 MRPL27Q9P0M9 148 aaKnown RBP1.99□□□□□ -2.09
XRN1-211ENST00000477237 OR1A1Q9P1Q5 309 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 PCYOX1Q9UHG3 505 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 ZNF230Q9UIE0 474 aaPredicted RBP1.99□□□□□ -2.09
XRN1-211ENST00000477237 MCTS1Q9ULC4 181 aaKnown RBP1.99□□□□□ -2.09
XRN1-211ENST00000477237 PPP2R2CQ9Y2T4 447 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 CARHSP1Q9Y2V2 147 aaKnown RBP1.99□□□□□ -2.09
XRN1-211ENST00000477237 EXOSC1Q9Y3B2 195 aaKnown RBP1.99□□□□□ -2.09
XRN1-211ENST00000477237 TMED7Q9Y3B3 224 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 RPL36Q9Y3U8 105 aaKnown RBP1.99□□□□□ -2.09
XRN1-211ENST00000477237 ADGRB3O60242 1522 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 TOPBP1Q92547 1522 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 SYCP2Q9BX26 1530 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 MYH9P35579 1960 aaKnown RBP1.99□□□□□ -2.09
XRN1-211ENST00000477237 DISP2A7MBM2 1401 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 NSD3Q9BZ95 1437 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 SBF1O95248 1867 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 CLTCL1P53675 1640 aa1.99□□□□□ -2.09
XRN1-211ENST00000477237 ROBO3Q96MS0 1386 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 XIRP1Q702N8 1843 aaKnown RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 SAMD9Q5K651 1589 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 ABCC2Q92887 1545 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 BORCS7-ASMTA0A0B4J1R7 106 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 TRAV38-1A0A0B4J264 116 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 IGHV2OR16-5A0A0B4J2B6 119 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 TMEM269A0A1B0GVZ9 245 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 MSGN1A6NI15 193 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 IFITM5A6NNB3 132 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 COLCA2A8K830 154 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 FOXI3A8MTJ6 420 aaPredicted RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 TMEM150CB9EJG8 249 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 G3V2L1 256 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 H3BTX0 84 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 PDCD5O14737 125 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 TAAR5O14804 337 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 DEGS1O15121 323 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 PHF1O43189 567 aaPredicted RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 FAM189A1O60320 539 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 GCM2O75603 506 aaPredicted RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 TRAPPC6AO75865 159 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 OR7C1O76099 320 aaPredicted RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 STK17BO94768 372 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 LALBAP00709 142 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 HBZP02008 142 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 SEMG1P04279 462 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 SERPINE1P05121 402 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 SULT1A3P0DMM9 295 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 SULT1A4P0DMN0 295 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 SDC1P18827 310 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 KLK2P20151 261 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 PSMB1P20618 241 aaKnown RBP1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms