RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 ZNF503-AS2A6NEH8 195 aa14.09□□□□□ -0.15
TMEM53-208ENST00000476724 ANKRD30BLA7E2S9 258 aa14.09□□□□□ -0.15
TMEM53-208ENST00000476724 CD300LBA8K4G0 201 aa14.09□□□□□ -0.15
TMEM53-208ENST00000476724 ST8SIA3O43173 380 aa14.09□□□□□ -0.15
TMEM53-208ENST00000476724 PHF1O43189 567 aaPredicted RBP14.09□□□□□ -0.15
TMEM53-208ENST00000476724 GPR137BO60478 399 aa14.09□□□□□ -0.15
TMEM53-208ENST00000476724 APLNRP35414 380 aa14.09□□□□□ -0.15
TMEM53-208ENST00000476724 CAV2P51636 162 aa14.09□□□□□ -0.15
TMEM53-208ENST00000476724 FBXW12Q6X9E4 464 aa14.09□□□□□ -0.15
TMEM53-208ENST00000476724 NUFIP2Q7Z417 695 aaKnown RBP14.09□□□□□ -0.15
TMEM53-208ENST00000476724 OR4A4PQ8NGN8 299 aa14.09□□□□□ -0.15
TMEM53-208ENST00000476724 NANOS1Q8WY41 292 aaKnown RBP14.09□□□□□ -0.15
TMEM53-208ENST00000476724 SEC11CQ9BY50 192 aa14.09□□□□□ -0.15
TMEM53-208ENST00000476724 MTCH1Q9NZJ7 389 aa14.09□□□□□ -0.15
TMEM53-208ENST00000476724 POMT1Q9Y6A1 747 aa14.09□□□□□ -0.15
TMEM53-208ENST00000476724 URB1O60287 2271 aaKnown RBP14.08□□□□□ -0.15
TMEM53-208ENST00000476724 BORCS7-ASMTA0A0B4J1R7 106 aa14.08□□□□□ -0.15
TMEM53-208ENST00000476724 OR5B21A6NL26 309 aa14.08□□□□□ -0.15
TMEM53-208ENST00000476724 F8W036 122 aa14.08□□□□□ -0.15
TMEM53-208ENST00000476724 TRIM77I1YAP6 450 aa14.08□□□□□ -0.15
TMEM53-208ENST00000476724 KLK10O43240 276 aa14.08□□□□□ -0.15
TMEM53-208ENST00000476724 CDS2O95674 445 aa14.08□□□□□ -0.15
TMEM53-208ENST00000476724 NGFP01138 241 aa14.08□□□□□ -0.15
TMEM53-208ENST00000476724 GLAP06280 429 aa14.08□□□□□ -0.15
TMEM53-208ENST00000476724 IGSF11Q5DX21 431 aa14.08□□□□□ -0.15
TMEM53-208ENST00000476724 LDLRAD3Q86YD5 345 aa14.08□□□□□ -0.15
TMEM53-208ENST00000476724 ZNF573Q86YE8 665 aa14.08□□□□□ -0.15
TMEM53-208ENST00000476724 ARV1Q9H2C2 271 aa14.08□□□□□ -0.15
TMEM53-208ENST00000476724 HRH4Q9H3N8 390 aa14.08□□□□□ -0.15
TMEM53-208ENST00000476724 TREM1Q9NP99 234 aa14.08□□□□□ -0.15
TMEM53-208ENST00000476724 SPRR3Q9UBC9 169 aa14.08□□□□□ -0.15
TMEM53-208ENST00000476724 NUPL2O15504 423 aaKnown RBP14.08□□□□□ -0.16
TMEM53-208ENST00000476724 GFRA3O60609 400 aa14.08□□□□□ -0.16
TMEM53-208ENST00000476724 MED6O75586 246 aa14.08□□□□□ -0.16
TMEM53-208ENST00000476724 WISP2O76076 250 aa14.08□□□□□ -0.16
TMEM53-208ENST00000476724 KCNJ3P48549 501 aa14.08□□□□□ -0.16
TMEM53-208ENST00000476724 OR11L1Q8NGX0 322 aa14.08□□□□□ -0.16
TMEM53-208ENST00000476724 OR5P3Q8WZ94 311 aa14.08□□□□□ -0.16
TMEM53-208ENST00000476724 TMEM222Q9H0R3 208 aa14.08□□□□□ -0.16
TMEM53-208ENST00000476724 RHOFQ9HBH0 211 aa14.08□□□□□ -0.16
TMEM53-208ENST00000476724 UQCC1Q9NVA1 299 aa14.08□□□□□ -0.16
TMEM53-208ENST00000476724 CEACAM4O75871 244 aa14.07□□□□□ -0.16
TMEM53-208ENST00000476724 GNRHRP30968 328 aa14.07□□□□□ -0.16
TMEM53-208ENST00000476724 ARHGDIBP52566 201 aa14.07□□□□□ -0.16
TMEM53-208ENST00000476724 AKR1C2P52895 323 aa14.07□□□□□ -0.16
TMEM53-208ENST00000476724 F2RL1P55085 397 aa14.07□□□□□ -0.16
TMEM53-208ENST00000476724 AKR1C1Q04828 323 aa14.07□□□□□ -0.16
TMEM53-208ENST00000476724 ZNF565Q8N9K5 539 aa14.07□□□□□ -0.16
TMEM53-208ENST00000476724 CLRN3Q8NCR9 226 aa14.07□□□□□ -0.16
TMEM53-208ENST00000476724 OR1K1Q8NGR3 316 aa14.07□□□□□ -0.16
TMEM53-208ENST00000476724 ZDHHC11Q9H8X9 412 aa14.07□□□□□ -0.16
TMEM53-208ENST00000476724 FAM212BQ9NTI7 297 aaPredicted RBP14.07□□□□□ -0.16
TMEM53-208ENST00000476724 ATP23Q9Y6H3 246 aa14.07□□□□□ -0.16
TMEM53-208ENST00000476724 ARHGAP21Q5T5U3 1957 aa14.07□□□□□ -0.16
TMEM53-208ENST00000476724 TRGV5A0A0B4J1U4 118 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 DUXBA0A1W2PPF3 345 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 TRDCB7Z8K6 153 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 GPR31O00270 319 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 TOR1AO14656 332 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 SIGLEC5O15389 551 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 SNAPINO95295 136 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 SEC11BP0C7V7 166 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 ADCYAP1P18509 176 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 RCC1P18754 421 aaPredicted RBP14.06□□□□□ -0.16
TMEM53-208ENST00000476724 GNG3P63215 75 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 GNMTQ14749 295 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 ZNF169Q14929 603 aaPredicted RBP14.06□□□□□ -0.16
TMEM53-208ENST00000476724 SWI5Q1ZZU3 235 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 FBXW9Q5XUX1 488 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 BTNL8Q6UX41 500 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 TMEM56Q96MV1 263 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 TP53RKQ96S44 253 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 SPIN2AQ99865 258 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 SPIN2BQ9BPZ2 258 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 CRIM1Q9NZV1 1036 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 TMEM56-RWDD3S4R434 201 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 TRBV6-6A0A0A6YYG2 114 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 J3QW42 95 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 ZNHIT1O43257 154 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 FBXO24O75426 580 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 IL32P24001 234 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 LPAR6P43657 344 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 IL24Q13007 206 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 FAM122CQ6P4D5 195 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 PUSL1Q8N0Z8 303 aaKnown RBP14.06□□□□□ -0.16
TMEM53-208ENST00000476724 SLC35G3Q8N808 338 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 OR4D5Q8NGN0 318 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 NEK7Q8TDX7 302 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 BCL2L2Q92843 193 aaPredicted RBP14.06□□□□□ -0.16
TMEM53-208ENST00000476724 WDYHV1Q96HA8 205 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 PKIBQ9C010 78 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 PRSS50Q9UI38 385 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 PURGQ9UJV8 347 aaKnown RBP14.06□□□□□ -0.16
TMEM53-208ENST00000476724 SHANK1Q9Y566 2161 aa14.06□□□□□ -0.16
TMEM53-208ENST00000476724 TUSC2O75896 110 aa14.05□□□□□ -0.16
TMEM53-208ENST00000476724 SRSF3P84103 164 aaKnown RBP14.05□□□□□ -0.16
TMEM53-208ENST00000476724 BATF2Q8N1L9 274 aa14.05□□□□□ -0.16
TMEM53-208ENST00000476724 OR52M1Q8NGK5 317 aa14.05□□□□□ -0.16
TMEM53-208ENST00000476724 LYPD6BQ8NI32 183 aa14.05□□□□□ -0.16
TMEM53-208ENST00000476724 ABHD14BQ96IU4 210 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms