RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 A0A1W2PS29 197 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 TMEM213A2RRL7 107 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 TMEM189A5PLL7 270 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 ANTXRLA6NF34 631 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 OR51F1A6NGY5 319 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 NPIPB13A6NJU9 1138 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 NPIPB4C9JG80 1138 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 M0R1X1 148 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 WNT10BO00744 389 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 NPIPB7O75200 414 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 UTS2O95399 124 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 CER1O95813 267 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 PTHLHP12272 177 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 ADRA2CP18825 462 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 CR2P20023 1033 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 ELAVL4P26378 380 aaKnown RBP3.61□□□□□ -1.83
CD55-208ENST00000476590 ACVR1BP36896 505 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 CDKN2AP42771 156 aaKnown RBP3.61□□□□□ -1.83
CD55-208ENST00000476590 NOVP48745 357 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 THBS3P49746 956 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 SIRPAP78324 504 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 HIST1H1AQ02539 215 aaPredicted RBP3.61□□□□□ -1.83
CD55-208ENST00000476590 TLE1Q04724 770 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 ZFP36L1Q07352 338 aaKnown RBP3.61□□□□□ -1.83
CD55-208ENST00000476590 MGAT2Q10469 447 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 SLC25A52Q3SY17 297 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 ZNF506Q5JVG8 444 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 SPATA31B1PQ5VZV4 182 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 SPSB3Q6PJ21 355 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 ACOT1Q86TX2 421 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 GGNQ86UU5 652 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 FAM90A1Q86YD7 464 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 TMEM256Q8N2U0 113 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 CSNK1A1LQ8N752 337 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 CYB561D1Q8N8Q1 229 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 ZDHHC22Q8N966 263 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 TMEM229BQ8NBD8 167 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 APCDD1LQ8NCL9 501 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 OR5A1Q8NGJ0 315 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 OR13G1Q8NGZ3 307 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 SLC25A40Q8TBP6 338 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 DYNLL2Q96FJ2 89 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 HPDLQ96IR7 371 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 UHRF2Q96PU4 802 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 P2RX4Q99571 388 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 HSPB9Q9BQS6 159 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 NDC1Q9BTX1 674 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 GPR174Q9BXC1 333 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 RSPO3Q9BXY4 272 aaPredicted RBP3.61□□□□□ -1.83
CD55-208ENST00000476590 PARP12Q9H0J9 701 aaKnown RBP3.61□□□□□ -1.83
CD55-208ENST00000476590 NPVFQ9HCQ7 196 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 SPANXA1Q9NS26 97 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 SLC2A6Q9UGQ3 507 aa3.61□□□□□ -1.83
CD55-208ENST00000476590 CSDC2Q9Y534 153 aaKnown RBP3.61□□□□□ -1.83
CD55-208ENST00000476590 TRAV8-6A0A0B4J262 113 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 TSPAN11A1L157 253 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 PSMB11A5LHX3 300 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 ANKRD30BLA7E2S9 258 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 B5MCH6 92 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.6□□□□□ -1.83
CD55-208ENST00000476590 F2RL2O00254 374 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 LATO43561 262 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 CD3DP04234 171 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 C8orf89P0DMQ9 161 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 PSG2P11465 335 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 FBLP22087 321 aaKnown RBP3.6□□□□□ -1.83
CD55-208ENST00000476590 KRTAP5-9P26371 169 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 ATP6V0CP27449 155 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 PPP1CCP36873 323 aaKnown RBP3.6□□□□□ -1.83
CD55-208ENST00000476590 RND3P61587 244 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 LCN6P62502 163 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 MEF2BQ02080 365 aaPredicted RBP3.6□□□□□ -1.83
CD55-208ENST00000476590 SRSF1Q07955 248 aaKnown RBP eCLIP3.6□□□□□ -1.83
CD55-208ENST00000476590 PPP1R1AQ13522 171 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 ICAM4Q14773 271 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 TESK1Q15569 626 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 DGAT2L7PQ6IED9 249 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 SLC18B1Q6NT16 456 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 C12orf54Q6X4T0 127 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 TPRG1Q6ZUI0 275 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 SIRT6Q8N6T7 355 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 ZIC4Q8N9L1 334 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 GATSQ8NAP1 163 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 ADAD2Q8NCV1 583 aaKnown RBP3.6□□□□□ -1.83
CD55-208ENST00000476590 OR4F17Q8NGA8 305 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 ZMYND19Q96E35 227 aaPredicted RBP3.6□□□□□ -1.83
CD55-208ENST00000476590 DERL3Q96Q80 235 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 OR4F4Q96R69 305 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 RTBDNQ9BSG5 229 aaPredicted RBP3.6□□□□□ -1.83
CD55-208ENST00000476590 LRRC61Q9BV99 259 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 VN1R1Q9GZP7 353 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 NPFFR1Q9GZQ6 430 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 OR51I2Q9H344 312 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 BANF2Q9H503 90 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 GCM1Q9NP62 436 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 BEX4Q9NWD9 120 aaPredicted RBP3.6□□□□□ -1.83
CD55-208ENST00000476590 CLDND1Q9NY35 253 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 WRAP73Q9P2S5 460 aaPredicted RBP3.6□□□□□ -1.83
CD55-208ENST00000476590 ICAM5Q9UMF0 924 aa3.6□□□□□ -1.83
CD55-208ENST00000476590 SH2B3Q9UQQ2 575 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms