RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 MRGPRX4Q96LA9 322 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 NUDT22Q9BRQ3 303 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 HDHD3Q9BSH5 251 aaPredicted RBP7.28□□□□□ -1.24
VAPB-205ENST00000476395 TBL1XR1Q9BZK7 514 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 SERINC1Q9NRX5 453 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 EHFQ9NZC4 300 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 SUSD2Q9UGT4 822 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 SHANK1Q9Y566 2161 aa7.28□□□□□ -1.24
VAPB-205ENST00000476395 KIAA2026Q5HYC2 2103 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 ELOA3CA0A087WX78 387 aaPredicted RBP7.27□□□□□ -1.25
VAPB-205ENST00000476395 K7N7A8 449 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 TRAF3IP2O43734 574 aaPredicted RBP7.27□□□□□ -1.25
VAPB-205ENST00000476395 OR6A2O95222 327 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 NUDT14O95848 222 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 IRF2P14316 349 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 CEBPDP49716 269 aaPredicted RBP7.27□□□□□ -1.25
VAPB-205ENST00000476395 UCP3P55916 312 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 GNB2P62879 340 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 PAX5Q02548 391 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 C1orf189Q5VU69 101 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 OPN5Q6U736 354 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 H1FNTQ75WM6 255 aaPredicted RBP7.27□□□□□ -1.25
VAPB-205ENST00000476395 SLC22A24Q8N4F4 322 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 RHBDD1Q8TEB9 315 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 ZCCHC14Q8WYQ9 949 aaKnown RBP7.27□□□□□ -1.25
VAPB-205ENST00000476395 ELOVL1Q9BW60 279 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 MRPS18CQ9Y3D5 142 aaKnown RBP7.27□□□□□ -1.25
VAPB-205ENST00000476395 IGHV1OR21-1A0A087WYE8 117 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 TCF21O43680 179 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 GAPDHP04406 335 aaKnown RBP7.27□□□□□ -1.25
VAPB-205ENST00000476395 HIST1H1DP16402 221 aaKnown RBP7.27□□□□□ -1.25
VAPB-205ENST00000476395 AMY2BP19961 511 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 GLIPR1P48060 266 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 EIF5AP63241 154 aaKnown RBP7.27□□□□□ -1.25
VAPB-205ENST00000476395 ICAM4Q14773 271 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 HERPUD1Q15011 391 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 SLC25A53Q5H9E4 307 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 PHYHD1Q5SRE7 291 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 RTL6Q6ICC9 239 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 LYZL2Q7Z4W2 148 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 SUMF1Q8NBK3 374 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 RNASE8Q8TDE3 154 aaKnown RBP7.27□□□□□ -1.25
VAPB-205ENST00000476395 LMX1AQ8TE12 382 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 CORO2AQ92828 525 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 GSX1Q9H4S2 264 aaPredicted RBP7.27□□□□□ -1.25
VAPB-205ENST00000476395 CHST11Q9NPF2 352 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 CENPMQ9NSP4 180 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 TMED3Q9Y3Q3 217 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 ZFHX4Q86UP3 3567 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 ASPMQ8IZT6 3477 aa7.27□□□□□ -1.25
VAPB-205ENST00000476395 DBHP09172 617 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 PET100P0DJ07 73 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 BIDP55957 195 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 TAS2R31P59538 309 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 PMS2P11Q13670 270 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 ARL6IP1Q15041 203 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 SLC25A47Q6Q0C1 308 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 GLIPR1L1Q6UWM5 242 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 Q6ZVH6 145 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 HLA-CQ95604 372 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 ZNF48Q96MX3 618 aaPredicted RBP7.26□□□□□ -1.25
VAPB-205ENST00000476395 UBE2ZQ9H832 354 aaPredicted RBP7.26□□□□□ -1.25
VAPB-205ENST00000476395 ABCA7Q8IZY2 2146 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 RALGAPA1Q6GYQ0 2036 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 RER1O15258 196 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 STAG3L2P0CL84 134 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 EPHA1P21709 976 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 ZNF93P35789 620 aaPredicted RBP7.26□□□□□ -1.25
VAPB-205ENST00000476395 PLPPR5Q32ZL2 321 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 ZNF705AQ6ZN79 300 aaPredicted RBP7.26□□□□□ -1.25
VAPB-205ENST00000476395 Q6ZSR3 168 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 PLPP5Q8NEB5 264 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 OR5H2Q8NGV7 314 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 FNDC9Q8TBE3 224 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 DPF1Q92782 380 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 NOL4LQ96MY1 436 aaPredicted RBP7.26□□□□□ -1.25
VAPB-205ENST00000476395 VPS25Q9BRG1 176 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 PBDC1Q9BVG4 233 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 VDAC3Q9Y277 283 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 WSB1Q9Y6I7 421 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 PCSK5Q92824 1860 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 M0R143 59 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 ONECUT2O95948 504 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 H2BFMP0C1H6 154 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 ERVS71-1P61550 626 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 CSNK2A1P68400 391 aaPredicted RBP7.26□□□□□ -1.25
VAPB-205ENST00000476395 MYBPHQ13203 477 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 ARFRP1Q13795 201 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 ZNF774Q6NX45 483 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 TMEM183AQ8IXX5 376 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 BEND2Q8NDZ0 799 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 CSNK2A3Q8NEV1 391 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 LIN37Q96GY3 246 aaPredicted RBP7.26□□□□□ -1.25
VAPB-205ENST00000476395 GPHA2Q96T91 129 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 METTL7AQ9H8H3 244 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 MCTS1Q9ULC4 181 aaKnown RBP7.26□□□□□ -1.25
VAPB-205ENST00000476395 POLR3KQ9Y2Y1 108 aaPredicted RBP7.26□□□□□ -1.25
VAPB-205ENST00000476395 ZDBF2Q9HCK1 2354 aa7.26□□□□□ -1.25
VAPB-205ENST00000476395 BDP1A6H8Y1 2624 aa7.25□□□□□ -1.25
VAPB-205ENST00000476395 IGLV3-12A0A075B6K2 115 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms