RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 G6PC2Q9NQR9 355 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 POLE3Q9NRF9 147 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 LAMP3Q9UQV4 416 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 TANC2Q9HCD6 1990 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 IGHV5-10-1A0A0J9YXX1 117 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 PRSS44E7EML9 344 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 PROB1E7EW31 1015 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 NKX2-8O15522 239 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 KLK10O43240 276 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 TNFSF14O43557 240 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 GALR2O43603 387 aaPredicted RBP4.34□□□□□ -1.71
CCDC39-204ENST00000476379 EFNA2O43921 213 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 AGFG2O95081 481 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 IFNA4P05014 189 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 CPN1P15169 458 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 RPS4Y1P22090 263 aaKnown RBP4.34□□□□□ -1.71
CCDC39-204ENST00000476379 ACKR3P25106 362 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 MPGP29372 298 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 APOBEC1P41238 236 aaKnown RBP4.34□□□□□ -1.71
CCDC39-204ENST00000476379 THEM4Q5T1C6 240 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 ASPHD2Q6ICH7 369 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 TUSC5Q8IXB3 177 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 PAQR4Q8N4S7 273 aaPredicted RBP4.34□□□□□ -1.71
CCDC39-204ENST00000476379 OR10D3Q8NH80 312 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 LEAP2Q969E1 77 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 FOXB1Q99853 325 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 BCO1Q9HAY6 547 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 SLC2A9Q9NRM0 540 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 SLC7A10Q9NS82 523 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 MED12LQ86YW9 2145 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 TMEM131Q92545 1883 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 A0A0A6YYD4 124 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 TRBV5-5A0A0J9YX44 114 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 A0A1W2PNU3 283 aaPredicted RBP4.34□□□□□ -1.72
CCDC39-204ENST00000476379 CXorf65A6NEN9 183 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 AQP7P3A6NL99 342 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 NUDT19A8MXV4 375 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 DNASE2O00115 360 aaPredicted RBP4.34□□□□□ -1.72
CCDC39-204ENST00000476379 BCL3P20749 454 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 ZBTB25P24278 435 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 GABRA4P48169 554 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 DYNLT3P51808 116 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 UBE2NP61088 152 aaKnown RBP4.34□□□□□ -1.72
CCDC39-204ENST00000476379 SLC35A1P78382 337 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 DEFA6Q01524 100 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 ZNF92Q03936 586 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 PRDX4Q13162 271 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.34□□□□□ -1.72
CCDC39-204ENST00000476379 FAM209BQ5JX69 171 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 ASPHD1Q5U4P2 390 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 UNQ9370/PRO34162Q6UXP9 181 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 SLC25A42Q86VD7 318 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 AGBL5Q8NDL9 886 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 DMBX1Q8NFW5 382 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 OR4F5Q8NH21 305 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 MRGPRFQ96AM1 343 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 SGK494Q96LW2 274 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 OR4F4Q96R69 305 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 C19orf43Q9BQ61 176 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 NRIP2Q9BQI9 281 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 NIPSNAP3BQ9BS92 247 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 C19orf12Q9NSK7 152 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 NECAP2Q9NVZ3 263 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 GNG12Q9UBI6 72 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 OSGIN2Q9Y236 505 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 LOXL2Q9Y4K0 774 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 MMACHCQ9Y4U1 282 aa4.34□□□□□ -1.72
CCDC39-204ENST00000476379 C9JQL5 133 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 CHST1O43916 411 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 IFNA10P01566 189 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 CD33P20138 364 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 MEOX2P50222 304 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 RAB1AP62820 205 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 COTL1Q14019 142 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 GFI1BQ5VTD9 330 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 OSR2Q8N2R0 312 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 CYB561D1Q8N8Q1 229 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 OR10S1Q8NGN2 331 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 PHYHIPQ92561 330 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 MRI1Q9BV20 369 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 RCC2Q9P258 522 aaKnown RBP4.33□□□□□ -1.72
CCDC39-204ENST00000476379 CACNG5Q9UF02 275 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 AUP1Q9Y679 476 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 LOC102724200A0A096LPH7 203 aaPredicted RBP4.33□□□□□ -1.72
CCDC39-204ENST00000476379 TGIF2-C20orf24A0A0A6YYL0 155 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 BLACEA4D250 179 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 CDIPTO14735 213 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 SYNGR1O43759 233 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 NDUFS6O75380 124 aaKnown RBP4.33□□□□□ -1.72
CCDC39-204ENST00000476379 CHRM2P08172 466 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 MELTFP08582 738 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 CD59P13987 128 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 MAGEA5P43359 124 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 CYB561P49447 251 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 DCAF7P61962 342 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 ISXQ2M1V0 245 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 EMC4Q5J8M3 183 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 OPN5Q6U736 354 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 OVCH2Q7RTZ1 564 aa4.33□□□□□ -1.72
CCDC39-204ENST00000476379 DPPA2Q7Z7J5 298 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms