RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 KIR2DS2P43631 304 aa6□□□□□ -1.45
USP54-211ENST00000474929 MAP2K4P45985 399 aa6□□□□□ -1.45
USP54-211ENST00000474929 CRIP2P52943 208 aaPredicted RBP6□□□□□ -1.45
USP54-211ENST00000474929 MFAP2P55001 183 aa6□□□□□ -1.45
USP54-211ENST00000474929 MTPNP58546 118 aa6□□□□□ -1.45
USP54-211ENST00000474929 TPPP2P59282 170 aa6□□□□□ -1.45
USP54-211ENST00000474929 RIPPLY1Q0D2K3 151 aa6□□□□□ -1.45
USP54-211ENST00000474929 KLF10Q13118 480 aa6□□□□□ -1.45
USP54-211ENST00000474929 TRIM25Q14258 630 aaKnown RBP6□□□□□ -1.45
USP54-211ENST00000474929 MMDQ15546 238 aa6□□□□□ -1.45
USP54-211ENST00000474929 SPIN3Q5JUX0 258 aa6□□□□□ -1.45
USP54-211ENST00000474929 IL34Q6ZMJ4 242 aa6□□□□□ -1.45
USP54-211ENST00000474929 MOB3CQ70IA8 216 aa6□□□□□ -1.45
USP54-211ENST00000474929 SLC15A3Q8IY34 581 aa6□□□□□ -1.45
USP54-211ENST00000474929 OR10A7Q8NGE5 316 aa6□□□□□ -1.45
USP54-211ENST00000474929 MRGPRDQ8TDS7 321 aa6□□□□□ -1.45
USP54-211ENST00000474929 RNF133Q8WVZ7 376 aa6□□□□□ -1.45
USP54-211ENST00000474929 KIRREL1Q96J84 757 aa6□□□□□ -1.45
USP54-211ENST00000474929 RHOVQ96L33 236 aa6□□□□□ -1.45
USP54-211ENST00000474929 SPACA5Q96QH8 159 aa6□□□□□ -1.45
USP54-211ENST00000474929 ELAC2Q9BQ52 826 aaKnown RBP6□□□□□ -1.45
USP54-211ENST00000474929 CHST6Q9GZX3 395 aa6□□□□□ -1.45
USP54-211ENST00000474929 FAM107BQ9H098 131 aa6□□□□□ -1.45
USP54-211ENST00000474929 ZC4H2Q9NQZ6 224 aa6□□□□□ -1.45
USP54-211ENST00000474929 SAR1AQ9NR31 198 aa6□□□□□ -1.45
USP54-211ENST00000474929 FLG2Q5D862 2391 aaPredicted RBP5.99□□□□□ -1.45
USP54-211ENST00000474929 A0A087WUU8 490 aa5.99□□□□□ -1.45
USP54-211ENST00000474929 KBTBD11-OT1A0A1B0GTJ5 212 aa5.99□□□□□ -1.45
USP54-211ENST00000474929 C13orf42A0A1B0GVH6 325 aa5.99□□□□□ -1.45
USP54-211ENST00000474929 DHRS12A0PJE2 317 aa5.99□□□□□ -1.45
USP54-211ENST00000474929 IZUMO1RA6ND01 250 aa5.99□□□□□ -1.45
USP54-211ENST00000474929 GSC2O15499 205 aa5.99□□□□□ -1.45
USP54-211ENST00000474929 NRASP01111 189 aa5.99□□□□□ -1.45
USP54-211ENST00000474929 CSN2P05814 226 aa5.99□□□□□ -1.45
USP54-211ENST00000474929 NCK1P16333 377 aa5.99□□□□□ -1.45
USP54-211ENST00000474929 HIST1H1CP16403 213 aaKnown RBP5.99□□□□□ -1.45
USP54-211ENST00000474929 FMO3P31513 532 aa5.99□□□□□ -1.45
USP54-211ENST00000474929 MECP2P51608 486 aaKnown RBP5.99□□□□□ -1.45
USP54-211ENST00000474929 SYNJ2BPP57105 145 aa5.99□□□□□ -1.45
USP54-211ENST00000474929 LINC00205P59089 165 aa5.99□□□□□ -1.45
USP54-211ENST00000474929 NANOS2P60321 138 aaKnown RBP5.99□□□□□ -1.45
USP54-211ENST00000474929 RPS16P62249 146 aaKnown RBP5.99□□□□□ -1.45
USP54-211ENST00000474929 ZNF91Q05481 1191 aa5.99□□□□□ -1.45
USP54-211ENST00000474929 CYLC2Q14093 348 aaPredicted RBP5.99□□□□□ -1.45
USP54-211ENST00000474929 GUCA2BQ16661 112 aa5.99□□□□□ -1.45
USP54-211ENST00000474929 ECSCRQ19T08 205 aa5.99□□□□□ -1.45
USP54-211ENST00000474929 VMACQ2NL98 169 aa5.99□□□□□ -1.45
USP54-211ENST00000474929 CD300EQ496F6 205 aaPredicted RBP5.99□□□□□ -1.45
USP54-211ENST00000474929 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.99□□□□□ -1.45
USP54-211ENST00000474929 STPG3Q8N7X2 389 aa5.99□□□□□ -1.45
USP54-211ENST00000474929 OR10A6Q8NH74 314 aa5.99□□□□□ -1.45
USP54-211ENST00000474929 UBALD1Q8TB05 177 aa5.99□□□□□ -1.45
USP54-211ENST00000474929 FANK1Q8TC84 345 aa5.99□□□□□ -1.45
USP54-211ENST00000474929 STON2Q8WXE9 905 aa5.99□□□□□ -1.45
USP54-211ENST00000474929 EMG1Q92979 244 aaKnown RBP5.99□□□□□ -1.45
USP54-211ENST00000474929 RCN3Q96D15 328 aa5.99□□□□□ -1.45
USP54-211ENST00000474929 CGREF1Q99674 301 aa5.99□□□□□ -1.45
USP54-211ENST00000474929 RNF126Q9BV68 326 aa5.99□□□□□ -1.45
USP54-211ENST00000474929 BRD7Q9NPI1 651 aa5.99□□□□□ -1.45
USP54-211ENST00000474929 TECRQ9NZ01 308 aaKnown RBP5.99□□□□□ -1.45
USP54-211ENST00000474929 IGHV4-4A0A075B6R2 117 aa5.98□□□□□ -1.45
USP54-211ENST00000474929 IGHV3-72A0A0B4J1Y9 119 aa5.98□□□□□ -1.45
USP54-211ENST00000474929 A0A0U1RQV5 110 aa5.98□□□□□ -1.45
USP54-211ENST00000474929 ODAMA1E959 279 aa5.98□□□□□ -1.45
USP54-211ENST00000474929 H3BUA1 57 aa5.98□□□□□ -1.45
USP54-211ENST00000474929 MRASO14807 208 aa5.98□□□□□ -1.45
USP54-211ENST00000474929 E2F6O75461 281 aa5.98□□□□□ -1.45
USP54-211ENST00000474929 AMBPP02760 352 aa5.98□□□□□ -1.45
USP54-211ENST00000474929 H2BFMP0C1H6 154 aa5.98□□□□□ -1.45
USP54-211ENST00000474929 SLC2A2P11168 524 aaPredicted RBP5.98□□□□□ -1.45
USP54-211ENST00000474929 TNFRSF1BP20333 461 aa5.98□□□□□ -1.45
USP54-211ENST00000474929 OR3A1P47881 315 aa5.98□□□□□ -1.45
USP54-211ENST00000474929 PSMA6P60900 246 aaKnown RBP5.98□□□□□ -1.45
USP54-211ENST00000474929 RPEL1Q2QD12 228 aa5.98□□□□□ -1.45
USP54-211ENST00000474929 Q6ZR54 194 aa5.98□□□□□ -1.45
USP54-211ENST00000474929 KCTD20Q7Z5Y7 419 aa5.98□□□□□ -1.45
USP54-211ENST00000474929 COMMD2Q86X83 199 aa5.98□□□□□ -1.45
USP54-211ENST00000474929 ZNF565Q8N9K5 539 aa5.98□□□□□ -1.45
USP54-211ENST00000474929 OR4K13Q8NH42 304 aa5.98□□□□□ -1.45
USP54-211ENST00000474929 HRH4Q9H3N8 390 aa5.98□□□□□ -1.45
USP54-211ENST00000474929 PLA2G2DQ9UNK4 145 aa5.98□□□□□ -1.45
USP54-211ENST00000474929 PSG11Q9UQ72 335 aa5.98□□□□□ -1.45
USP54-211ENST00000474929 IGHV7-81A0A0B4J1V7 117 aa5.97□□□□□ -1.45
USP54-211ENST00000474929 A0A0B4J203 849 aa5.97□□□□□ -1.45
USP54-211ENST00000474929 TRAV10A0A0B4J240 114 aa5.97□□□□□ -1.45
USP54-211ENST00000474929 PQLC2LA1A4F0 135 aa5.97□□□□□ -1.45
USP54-211ENST00000474929 TVP23AA6NH52 213 aa5.97□□□□□ -1.45
USP54-211ENST00000474929 UNC119BA6NIH7 251 aa5.97□□□□□ -1.45
USP54-211ENST00000474929 ZNF785A8K8V0 405 aa5.97□□□□□ -1.45
USP54-211ENST00000474929 ZNF593O00488 134 aaPredicted RBP5.97□□□□□ -1.45
USP54-211ENST00000474929 CCDC22O60826 627 aa5.97□□□□□ -1.45
USP54-211ENST00000474929 CYB5AP00167 134 aa5.97□□□□□ -1.45
USP54-211ENST00000474929 IGHA1P01876 353 aa5.97□□□□□ -1.45
USP54-211ENST00000474929 CTRB1P17538 263 aa5.97□□□□□ -1.45
USP54-211ENST00000474929 AADACP22760 399 aa5.97□□□□□ -1.45
USP54-211ENST00000474929 OPRL1P41146 370 aa5.97□□□□□ -1.45
USP54-211ENST00000474929 GNG10P50151 68 aa5.97□□□□□ -1.45
USP54-211ENST00000474929 CRYBA2P53672 197 aa5.97□□□□□ -1.45
USP54-211ENST00000474929 GNGT1P63211 74 aa5.97□□□□□ -1.45
USP54-211ENST00000474929 DIAPH2-AS1Q14236 149 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms