RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 PTGFRP43088 359 aa12.33□□□□□ -0.44
VARS-223ENST00000474643 OR3A4PP47883 348 aa12.33□□□□□ -0.44
VARS-223ENST00000474643 MTNR1BP49286 362 aa12.33□□□□□ -0.44
VARS-223ENST00000474643 BMXP51813 675 aa12.33□□□□□ -0.44
VARS-223ENST00000474643 ZP1P60852 638 aa12.33□□□□□ -0.44
VARS-223ENST00000474643 GRK1Q15835 563 aa12.33□□□□□ -0.44
VARS-223ENST00000474643 SSX1Q16384 188 aa12.33□□□□□ -0.44
VARS-223ENST00000474643 ACSM3Q53FZ2 586 aa12.33□□□□□ -0.44
VARS-223ENST00000474643 ASPHD2Q6ICH7 369 aa12.33□□□□□ -0.44
VARS-223ENST00000474643 PXT1Q8NFP0 134 aa12.33□□□□□ -0.44
VARS-223ENST00000474643 OR13F1Q8NGS4 319 aa12.33□□□□□ -0.44
VARS-223ENST00000474643 TNFRSF14Q92956 283 aa12.33□□□□□ -0.44
VARS-223ENST00000474643 CHST6Q9GZX3 395 aa12.33□□□□□ -0.44
VARS-223ENST00000474643 METTL9Q9H1A3 318 aa12.33□□□□□ -0.44
VARS-223ENST00000474643 C16orf95Q9H693 158 aa12.33□□□□□ -0.44
VARS-223ENST00000474643 ABCB10Q9NRK6 738 aa12.33□□□□□ -0.44
VARS-223ENST00000474643 FOXJ3Q9UPW0 622 aa12.33□□□□□ -0.44
VARS-223ENST00000474643 TRAV8-7A0A075B6U6 113 aa12.32□□□□□ -0.44
VARS-223ENST00000474643 ARL6IP5O75915 188 aa12.32□□□□□ -0.44
VARS-223ENST00000474643 CLPXO76031 633 aa12.32□□□□□ -0.44
VARS-223ENST00000474643 CDRT1O95170 752 aa12.32□□□□□ -0.44
VARS-223ENST00000474643 IGFBP3P17936 291 aaPredicted RBP12.32□□□□□ -0.44
VARS-223ENST00000474643 PROK1P58294 105 aa12.32□□□□□ -0.44
VARS-223ENST00000474643 ZNF146Q15072 292 aa12.32□□□□□ -0.44
VARS-223ENST00000474643 ARSJQ5FYB0 599 aaPredicted RBP12.32□□□□□ -0.44
VARS-223ENST00000474643 ZNF782Q6ZMW2 699 aaPredicted RBP12.32□□□□□ -0.44
VARS-223ENST00000474643 CEACAM19Q7Z692 300 aa12.32□□□□□ -0.44
VARS-223ENST00000474643 CDH26Q8IXH8 852 aa12.32□□□□□ -0.44
VARS-223ENST00000474643 OR8H2Q8N162 312 aa12.32□□□□□ -0.44
VARS-223ENST00000474643 DTX3Q8N9I9 347 aa12.32□□□□□ -0.44
VARS-223ENST00000474643 OR10K1Q8NGX5 313 aa12.32□□□□□ -0.44
VARS-223ENST00000474643 OR2T6Q8NHC8 308 aa12.32□□□□□ -0.44
VARS-223ENST00000474643 FAM110DQ8TAY7 271 aaPredicted RBP12.32□□□□□ -0.44
VARS-223ENST00000474643 TMEM203Q969S6 136 aa12.32□□□□□ -0.44
VARS-223ENST00000474643 PCDHB16Q9NRJ7 776 aa12.32□□□□□ -0.44
VARS-223ENST00000474643 DEGS1O15121 323 aa12.31□□□□□ -0.44
VARS-223ENST00000474643 PEX14O75381 377 aa12.31□□□□□ -0.44
VARS-223ENST00000474643 OR2H2O95918 312 aa12.31□□□□□ -0.44
VARS-223ENST00000474643 CSF1P09603 554 aa12.31□□□□□ -0.44
VARS-223ENST00000474643 UCHL1P09936 223 aa12.31□□□□□ -0.44
VARS-223ENST00000474643 CD36P16671 472 aa12.31□□□□□ -0.44
VARS-223ENST00000474643 SERPINA2P20848 420 aa12.31□□□□□ -0.44
VARS-223ENST00000474643 INSL4Q14641 139 aa12.31□□□□□ -0.44
VARS-223ENST00000474643 PDLIM3Q53GG5 364 aaPredicted RBP12.31□□□□□ -0.44
VARS-223ENST00000474643 PLA1AQ53H76 456 aa12.31□□□□□ -0.44
VARS-223ENST00000474643 TMEM200BQ69YZ2 307 aa12.31□□□□□ -0.44
VARS-223ENST00000474643 SLC35E4Q6ICL7 350 aa12.31□□□□□ -0.44
VARS-223ENST00000474643 CRIP3Q6Q6R5 217 aa12.31□□□□□ -0.44
VARS-223ENST00000474643 OR13D1Q8NGV5 346 aa12.31□□□□□ -0.44
VARS-223ENST00000474643 YIPF6Q96EC8 236 aa12.31□□□□□ -0.44
VARS-223ENST00000474643 BCL7BQ9BQE9 202 aa12.31□□□□□ -0.44
VARS-223ENST00000474643 NPFFR1Q9GZQ6 430 aa12.31□□□□□ -0.44
VARS-223ENST00000474643 STUB1Q9UNE7 303 aa12.31□□□□□ -0.44
VARS-223ENST00000474643 DSCAML1Q8TD84 2053 aa12.31□□□□□ -0.44
VARS-223ENST00000474643 KIAA2026Q5HYC2 2103 aa12.31□□□□□ -0.44
VARS-223ENST00000474643 TMEM82A0PJX8 343 aa12.3□□□□□ -0.44
VARS-223ENST00000474643 MEGF11A6BM72 1044 aa12.3□□□□□ -0.44
VARS-223ENST00000474643 MGST3O14880 152 aa12.3□□□□□ -0.44
VARS-223ENST00000474643 ZNF737O75373 536 aa12.3□□□□□ -0.44
VARS-223ENST00000474643 TSPAN9O75954 239 aa12.3□□□□□ -0.44
VARS-223ENST00000474643 ARG1P05089 322 aa12.3□□□□□ -0.44
VARS-223ENST00000474643 CCL3L1P16619 93 aa12.3□□□□□ -0.44
VARS-223ENST00000474643 RANBP1P43487 201 aa12.3□□□□□ -0.44
VARS-223ENST00000474643 RPS25P62851 125 aaKnown RBP12.3□□□□□ -0.44
VARS-223ENST00000474643 DYNC1I2Q13409 638 aaKnown RBP12.3□□□□□ -0.44
VARS-223ENST00000474643 HSD17B12Q53GQ0 312 aa12.3□□□□□ -0.44
VARS-223ENST00000474643 AWAT2Q6E213 333 aa12.3□□□□□ -0.44
VARS-223ENST00000474643 C11orf88Q6PI97 169 aa12.3□□□□□ -0.44
VARS-223ENST00000474643 GPR141Q7Z602 305 aa12.3□□□□□ -0.44
VARS-223ENST00000474643 TRAPPC6BQ86SZ2 158 aa12.3□□□□□ -0.44
VARS-223ENST00000474643 NKAIN3Q8N8D7 197 aa12.3□□□□□ -0.44
VARS-223ENST00000474643 FOXRED1Q96CU9 486 aaPredicted RBP12.3□□□□□ -0.44
VARS-223ENST00000474643 SEBOXQ9HB31 216 aaPredicted RBP12.3□□□□□ -0.44
VARS-223ENST00000474643 ING3Q9NXR8 418 aa12.3□□□□□ -0.44
VARS-223ENST00000474643 MRPS28Q9Y2Q9 187 aaKnown RBP12.3□□□□□ -0.44
VARS-223ENST00000474643 TRAV1-2A0A0B4J238 106 aa12.29□□□□□ -0.44
VARS-223ENST00000474643 hADV38S2A0JD32 116 aa12.29□□□□□ -0.44
VARS-223ENST00000474643 MEX3AA1L020 520 aaKnown RBP12.29□□□□□ -0.44
VARS-223ENST00000474643 FUOMA2VDF0 154 aa12.29□□□□□ -0.44
VARS-223ENST00000474643 H3BUI4 141 aa12.29□□□□□ -0.44
VARS-223ENST00000474643 HSPB6O14558 160 aa12.29□□□□□ -0.44
VARS-223ENST00000474643 PIN1P1O15428 100 aa12.29□□□□□ -0.44
VARS-223ENST00000474643 PSPNO60542 156 aa12.29□□□□□ -0.44
VARS-223ENST00000474643 ZNF780AO75290 641 aaPredicted RBP12.29□□□□□ -0.44
VARS-223ENST00000474643 KRTAP10-3P60369 221 aa12.29□□□□□ -0.44
VARS-223ENST00000474643 FABP5Q01469 135 aa12.29□□□□□ -0.44
VARS-223ENST00000474643 GPR176Q14439 515 aa12.29□□□□□ -0.44
VARS-223ENST00000474643 FAM189A2Q15884 450 aa12.29□□□□□ -0.44
VARS-223ENST00000474643 SLC22A6Q4U2R8 563 aa12.29□□□□□ -0.44
VARS-223ENST00000474643 FAM27D1Q5T7N8 215 aa12.29□□□□□ -0.44
VARS-223ENST00000474643 ELP2Q6IA86 826 aa12.29□□□□□ -0.44
VARS-223ENST00000474643 TMEM91Q6ZNR0 172 aa12.29□□□□□ -0.44
VARS-223ENST00000474643 LIAT1Q6ZQX7 453 aa12.29□□□□□ -0.44
VARS-223ENST00000474643 ANKRD13BQ86YJ7 626 aa12.29□□□□□ -0.44
VARS-223ENST00000474643 OSR2Q8N2R0 312 aa12.29□□□□□ -0.44
VARS-223ENST00000474643 TPRX1Q8N7U7 411 aa12.29□□□□□ -0.44
VARS-223ENST00000474643 CHST4Q8NCG5 386 aa12.29□□□□□ -0.44
VARS-223ENST00000474643 OR4S1Q8NGB4 309 aa12.29□□□□□ -0.44
VARS-223ENST00000474643 C17orf50Q8WW18 174 aa12.29□□□□□ -0.44
VARS-223ENST00000474643 SSR3Q9UNL2 185 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms