RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 PRORYQ9H606 182 aa15.2■□□□□ 0.02
VARS2-206ENST00000473916 C1orf123Q9NWV4 160 aa15.2■□□□□ 0.02
VARS2-206ENST00000473916 ABCD4O14678 606 aa15.19■□□□□ 0.02
VARS2-206ENST00000473916 BET1O15155 118 aa15.19■□□□□ 0.02
VARS2-206ENST00000473916 SPRY3O43610 288 aa15.19■□□□□ 0.02
VARS2-206ENST00000473916 AADACP22760 399 aa15.19■□□□□ 0.02
VARS2-206ENST00000473916 SSTR2P30874 369 aa15.19■□□□□ 0.02
VARS2-206ENST00000473916 BSPH1Q075Z2 132 aa15.19■□□□□ 0.02
VARS2-206ENST00000473916 ANKRD55Q3KP44 614 aa15.19■□□□□ 0.02
VARS2-206ENST00000473916 LGALSLQ3ZCW2 172 aaPredicted RBP15.19■□□□□ 0.02
VARS2-206ENST00000473916 ELMOD3Q96FG2 381 aa15.19■□□□□ 0.02
VARS2-206ENST00000473916 SEC22AQ96IW7 307 aa15.19■□□□□ 0.02
VARS2-206ENST00000473916 WFIKKN1Q96NZ8 548 aa15.19■□□□□ 0.02
VARS2-206ENST00000473916 PHB2Q99623 299 aa15.19■□□□□ 0.02
VARS2-206ENST00000473916 RHOFQ9HBH0 211 aa15.19■□□□□ 0.02
VARS2-206ENST00000473916 DECR2Q9NUI1 292 aa15.19■□□□□ 0.02
VARS2-206ENST00000473916 IGLV3-9A0A075B6K5 115 aa15.19■□□□□ 0.02
VARS2-206ENST00000473916 PSPNO60542 156 aa15.19■□□□□ 0.02
VARS2-206ENST00000473916 NOS1APO75052 506 aaPredicted RBP15.19■□□□□ 0.02
VARS2-206ENST00000473916 SFT2D2O95562 160 aa15.19■□□□□ 0.02
VARS2-206ENST00000473916 PTBP3O95758 552 aaKnown RBP15.19■□□□□ 0.02
VARS2-206ENST00000473916 HAND1O96004 215 aa15.19■□□□□ 0.02
VARS2-206ENST00000473916 EGR1P18146 543 aa15.19■□□□□ 0.02
VARS2-206ENST00000473916 CA7P43166 264 aa15.19■□□□□ 0.02
VARS2-206ENST00000473916 TMEM165Q9HC07 324 aa15.19■□□□□ 0.02
VARS2-206ENST00000473916 TAAR3PQ9P1P4 343 aa15.19■□□□□ 0.02
VARS2-206ENST00000473916 TPD52L2O43399 206 aaKnown RBP15.18■□□□□ 0.02
VARS2-206ENST00000473916 TSC22D2O75157 780 aa15.18■□□□□ 0.02
VARS2-206ENST00000473916 SLC34A2O95436 690 aa15.18■□□□□ 0.02
VARS2-206ENST00000473916 SEC61A1P61619 476 aaKnown RBP15.18■□□□□ 0.02
VARS2-206ENST00000473916 SURF2Q15527 256 aaPredicted RBP15.18■□□□□ 0.02
VARS2-206ENST00000473916 ACP7Q6ZNF0 438 aa15.18■□□□□ 0.02
VARS2-206ENST00000473916 Q6ZS49 121 aa15.18■□□□□ 0.02
VARS2-206ENST00000473916 OR5T2Q8NGG2 359 aa15.18■□□□□ 0.02
VARS2-206ENST00000473916 UBALD1Q8TB05 177 aa15.18■□□□□ 0.02
VARS2-206ENST00000473916 LRRC29Q8WV35 223 aa15.18■□□□□ 0.02
VARS2-206ENST00000473916 OR2V2Q96R30 315 aa15.18■□□□□ 0.02
VARS2-206ENST00000473916 METRNQ9UJH8 293 aa15.18■□□□□ 0.02
VARS2-206ENST00000473916 PAIP2BQ9ULR5 123 aaKnown RBP15.18■□□□□ 0.02
VARS2-206ENST00000473916 MED19A0JLT2 244 aaPredicted RBP15.17■□□□□ 0.02
VARS2-206ENST00000473916 DBX1A6NMT0 343 aa15.17■□□□□ 0.02
VARS2-206ENST00000473916 FAM25EA8MYX2 175 aa15.17■□□□□ 0.02
VARS2-206ENST00000473916 CDSNQ15517 529 aa15.17■□□□□ 0.02
VARS2-206ENST00000473916 TMEM108Q6UXF1 575 aa15.17■□□□□ 0.02
VARS2-206ENST00000473916 ASCC1Q8N9N2 400 aaKnown RBP15.17■□□□□ 0.02
VARS2-206ENST00000473916 ST6GALNAC3Q8NDV1 305 aa15.17■□□□□ 0.02
VARS2-206ENST00000473916 SCGB3A2Q96PL1 93 aa15.17■□□□□ 0.02
VARS2-206ENST00000473916 USB1Q9BQ65 265 aaKnown RBP15.17■□□□□ 0.02
VARS2-206ENST00000473916 C14orf166Q9Y224 244 aaKnown RBP15.17■□□□□ 0.02
VARS2-206ENST00000473916 PKDREJQ9NTG1 2253 aa15.17■□□□□ 0.02
VARS2-206ENST00000473916 FAM90A27PA6NNH2 459 aa15.17■□□□□ 0.02
VARS2-206ENST00000473916 TRDCB7Z8K6 153 aa15.17■□□□□ 0.02
VARS2-206ENST00000473916 CCL21O00585 134 aa15.17■□□□□ 0.02
VARS2-206ENST00000473916 SH2D1BO14796 132 aa15.17■□□□□ 0.02
VARS2-206ENST00000473916 ADAP1O75689 374 aa15.17■□□□□ 0.02
VARS2-206ENST00000473916 ZNF728P0DKX0 622 aa15.17■□□□□ 0.02
VARS2-206ENST00000473916 CD200P41217 278 aa15.17■□□□□ 0.02
VARS2-206ENST00000473916 SORDQ00796 357 aa15.17■□□□□ 0.02
VARS2-206ENST00000473916 PHLDA2Q53GA4 152 aa15.17■□□□□ 0.02
VARS2-206ENST00000473916 ADAM5Q6NVV9 412 aa15.17■□□□□ 0.02
VARS2-206ENST00000473916 SPERTQ8NA61 448 aa15.17■□□□□ 0.02
VARS2-206ENST00000473916 OR11L1Q8NGX0 322 aa15.17■□□□□ 0.02
VARS2-206ENST00000473916 MOB3AQ96BX8 217 aa15.17■□□□□ 0.02
VARS2-206ENST00000473916 ATP23Q9Y6H3 246 aa15.17■□□□□ 0.02
VARS2-206ENST00000473916 ARID1AO14497 2285 aa15.16■□□□□ 0.02
VARS2-206ENST00000473916 TRAV14DV4A0A0A6YYC5 116 aa15.16■□□□□ 0.02
VARS2-206ENST00000473916 PLSCR5A0PG75 271 aa15.16■□□□□ 0.02
VARS2-206ENST00000473916 MPTX1A8MV57 137 aa15.16■□□□□ 0.02
VARS2-206ENST00000473916 RGS13O14921 159 aa15.16■□□□□ 0.02
VARS2-206ENST00000473916 PPYP01298 95 aa15.16■□□□□ 0.02
VARS2-206ENST00000473916 CTSDP07339 412 aaPredicted RBP15.16■□□□□ 0.02
VARS2-206ENST00000473916 ACAA1P09110 424 aaPredicted RBP15.16■□□□□ 0.02
VARS2-206ENST00000473916 GRNP28799 593 aaKnown RBP15.16■□□□□ 0.02
VARS2-206ENST00000473916 GLP1RP43220 463 aa15.16■□□□□ 0.02
VARS2-206ENST00000473916 RBM39Q14498 530 aaKnown RBP15.16■□□□□ 0.02
VARS2-206ENST00000473916 SPIN3Q5JUX0 258 aa15.16■□□□□ 0.02
VARS2-206ENST00000473916 MOGAT3Q86VF5 341 aa15.16■□□□□ 0.02
VARS2-206ENST00000473916 BOLLQ8N9W6 283 aaKnown RBP15.16■□□□□ 0.02
VARS2-206ENST00000473916 KDF1Q8NAX2 398 aaPredicted RBP15.16■□□□□ 0.02
VARS2-206ENST00000473916 ITLN1Q8WWA0 313 aa15.16■□□□□ 0.02
VARS2-206ENST00000473916 NKX2-6A6NCS4 301 aa15.16■□□□□ 0.02
VARS2-206ENST00000473916 RFPL4AA6NLU0 287 aa15.16■□□□□ 0.02
VARS2-206ENST00000473916 RFPL4AL1F8VTS6 287 aa15.16■□□□□ 0.02
VARS2-206ENST00000473916 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.16■□□□□ 0.02
VARS2-206ENST00000473916 CXCL2P19875 107 aa15.16■□□□□ 0.02
VARS2-206ENST00000473916 PTAFRP25105 342 aa15.16■□□□□ 0.02
VARS2-206ENST00000473916 CASP6P55212 293 aa15.16■□□□□ 0.02
VARS2-206ENST00000473916 PIGPP57054 158 aa15.16■□□□□ 0.02
VARS2-206ENST00000473916 LRRC37A5PQ49AS3 106 aa15.16■□□□□ 0.02
VARS2-206ENST00000473916 ZNF880Q6PDB4 577 aa15.16■□□□□ 0.02
VARS2-206ENST00000473916 ZNF497Q6ZNH5 498 aa15.16■□□□□ 0.02
VARS2-206ENST00000473916 MRPL24Q96A35 216 aaKnown RBP15.16■□□□□ 0.02
VARS2-206ENST00000473916 MEGF10Q96KG7 1140 aa15.16■□□□□ 0.02
VARS2-206ENST00000473916 FXYD6-FXYD2A0A087WZ82 144 aa15.15■□□□□ 0.02
VARS2-206ENST00000473916 TRBV6-6A0A0A6YYG2 114 aa15.15■□□□□ 0.02
VARS2-206ENST00000473916 IGKV1D-13A0A0B4J2D9 117 aa15.15■□□□□ 0.02
VARS2-206ENST00000473916 GLAP06280 429 aa15.15■□□□□ 0.02
VARS2-206ENST00000473916 IGKV1-13P0DP09 117 aa15.15■□□□□ 0.02
VARS2-206ENST00000473916 SERPINF1P36955 418 aa15.15■□□□□ 0.02
VARS2-206ENST00000473916 ZNF81P51508 661 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms