RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 GGT3PA6NGU5 568 aa12.69□□□□□ -0.38
LMNA-213ENST00000473598 J3QW42 95 aa12.69□□□□□ -0.38
LMNA-213ENST00000473598 CRTAPO75718 401 aaPredicted RBP12.69□□□□□ -0.38
LMNA-213ENST00000473598 CPT2P23786 658 aa12.69□□□□□ -0.38
LMNA-213ENST00000473598 ACKR3P25106 362 aa12.69□□□□□ -0.38
LMNA-213ENST00000473598 THBS4P35443 961 aa12.69□□□□□ -0.38
LMNA-213ENST00000473598 EFNB2P52799 333 aa12.69□□□□□ -0.38
LMNA-213ENST00000473598 F2RL1P55085 397 aa12.69□□□□□ -0.38
LMNA-213ENST00000473598 SRSF3P84103 164 aaKnown RBP12.69□□□□□ -0.38
LMNA-213ENST00000473598 SPOCK1Q08629 439 aa12.69□□□□□ -0.38
LMNA-213ENST00000473598 MALLQ13021 153 aa12.69□□□□□ -0.38
LMNA-213ENST00000473598 HNF4GQ14541 408 aa12.69□□□□□ -0.38
LMNA-213ENST00000473598 AKIRIN2Q53H80 203 aa12.69□□□□□ -0.38
LMNA-213ENST00000473598 OR10K2Q6IF99 312 aa12.69□□□□□ -0.38
LMNA-213ENST00000473598 ACOT7LQ6ZUV0 252 aa12.69□□□□□ -0.38
LMNA-213ENST00000473598 OR13C9Q8NGT0 318 aa12.69□□□□□ -0.38
LMNA-213ENST00000473598 PP6455Q8WZ26 134 aa12.69□□□□□ -0.38
LMNA-213ENST00000473598 LRRK2Q5S007 2527 aa12.69□□□□□ -0.38
LMNA-213ENST00000473598 HEATR1Q9H583 2144 aaKnown RBP12.69□□□□□ -0.38
LMNA-213ENST00000473598 CTAG2O75638 210 aa12.69□□□□□ -0.38
LMNA-213ENST00000473598 CECR9P0C854 216 aa12.69□□□□□ -0.38
LMNA-213ENST00000473598 PTHLHP12272 177 aa12.69□□□□□ -0.38
LMNA-213ENST00000473598 FAHP16930 419 aa12.69□□□□□ -0.38
LMNA-213ENST00000473598 FAUP35544 74 aaKnown RBP12.69□□□□□ -0.38
LMNA-213ENST00000473598 GSK3AP49840 483 aa12.69□□□□□ -0.38
LMNA-213ENST00000473598 OR8B8Q15620 311 aa12.69□□□□□ -0.38
LMNA-213ENST00000473598 C11orf88Q6PI97 169 aa12.69□□□□□ -0.38
LMNA-213ENST00000473598 NKAIN3Q8N8D7 197 aa12.69□□□□□ -0.38
LMNA-213ENST00000473598 RNF141Q8WVD5 230 aa12.69□□□□□ -0.38
LMNA-213ENST00000473598 MUCL1Q96DR8 90 aa12.69□□□□□ -0.38
LMNA-213ENST00000473598 REPIN1Q9BWE0 567 aaKnown RBP12.69□□□□□ -0.38
LMNA-213ENST00000473598 IGHV1-18A0A0C4DH31 117 aa12.68□□□□□ -0.38
LMNA-213ENST00000473598 C16orf97H3BN30 126 aa12.68□□□□□ -0.38
LMNA-213ENST00000473598 H7C1Q1 480 aa12.68□□□□□ -0.38
LMNA-213ENST00000473598 HTR2CP28335 458 aa12.68□□□□□ -0.38
LMNA-213ENST00000473598 CCKARP32238 428 aa12.68□□□□□ -0.38
LMNA-213ENST00000473598 PRSS12P56730 875 aa12.68□□□□□ -0.38
LMNA-213ENST00000473598 RBM39Q14498 530 aaKnown RBP12.68□□□□□ -0.38
LMNA-213ENST00000473598 NCMAPQ5T1S8 102 aa12.68□□□□□ -0.38
LMNA-213ENST00000473598 BIVMQ86UB2 503 aa12.68□□□□□ -0.38
LMNA-213ENST00000473598 LYPD6Q86Y78 171 aa12.68□□□□□ -0.38
LMNA-213ENST00000473598 OR5L1Q8NGL2 311 aa12.68□□□□□ -0.38
LMNA-213ENST00000473598 TNFAIP8L1Q8WVP5 186 aa12.68□□□□□ -0.38
LMNA-213ENST00000473598 RSRP1Q9BUV0 290 aa12.68□□□□□ -0.38
LMNA-213ENST00000473598 TMEM272A0A1B0GTI8 110 aa12.67□□□□□ -0.38
LMNA-213ENST00000473598 SMPD2O60906 423 aa12.67□□□□□ -0.38
LMNA-213ENST00000473598 MED6O75586 246 aa12.67□□□□□ -0.38
LMNA-213ENST00000473598 CHRNB4P30926 498 aa12.67□□□□□ -0.38
LMNA-213ENST00000473598 MAS1LP35410 378 aa12.67□□□□□ -0.38
LMNA-213ENST00000473598 C3orf36Q3SXR2 165 aa12.67□□□□□ -0.38
LMNA-213ENST00000473598 C4orf17Q53FE4 359 aa12.67□□□□□ -0.38
LMNA-213ENST00000473598 RNASE10Q5GAN6 216 aaKnown RBP12.67□□□□□ -0.38
LMNA-213ENST00000473598 MRPL21Q7Z2W9 205 aaKnown RBP12.67□□□□□ -0.38
LMNA-213ENST00000473598 MUC20Q8N307 709 aaPredicted RBP12.67□□□□□ -0.38
LMNA-213ENST00000473598 BEND2Q8NDZ0 799 aa12.67□□□□□ -0.38
LMNA-213ENST00000473598 R3HDM4Q96D70 268 aa12.67□□□□□ -0.38
LMNA-213ENST00000473598 OR51B6Q9H340 312 aa12.67□□□□□ -0.38
LMNA-213ENST00000473598 KCNK15Q9H427 330 aa12.67□□□□□ -0.38
LMNA-213ENST00000473598 POFUT1Q9H488 388 aa12.67□□□□□ -0.38
LMNA-213ENST00000473598 ZNF705EA8MWA4 302 aaPredicted RBP12.67□□□□□ -0.38
LMNA-213ENST00000473598 MFNGO00587 321 aa12.67□□□□□ -0.38
LMNA-213ENST00000473598 ERCC1P07992 297 aaPredicted RBP12.67□□□□□ -0.38
LMNA-213ENST00000473598 ADORA2A-AS1P86434 159 aa12.67□□□□□ -0.38
LMNA-213ENST00000473598 NAAAQ02083 359 aa12.67□□□□□ -0.38
LMNA-213ENST00000473598 CYB5R2Q6BCY4 276 aa12.67□□□□□ -0.38
LMNA-213ENST00000473598 LPCAT3Q6P1A2 487 aa12.67□□□□□ -0.38
LMNA-213ENST00000473598 OR5AS1Q8N127 324 aa12.67□□□□□ -0.38
LMNA-213ENST00000473598 OR52N4Q8NGI2 321 aa12.67□□□□□ -0.38
LMNA-213ENST00000473598 FOXRED1Q96CU9 486 aaPredicted RBP12.67□□□□□ -0.38
LMNA-213ENST00000473598 NKX3-1Q99801 234 aaPredicted RBP12.67□□□□□ -0.38
LMNA-213ENST00000473598 CGGBP1Q9UFW8 167 aaPredicted RBP12.67□□□□□ -0.38
LMNA-213ENST00000473598 KPTNQ9Y664 436 aa12.67□□□□□ -0.38
LMNA-213ENST00000473598 ADGRG4Q8IZF6 3080 aa12.66□□□□□ -0.38
LMNA-213ENST00000473598 IGKV1-9A0A0C4DH69 117 aa12.66□□□□□ -0.38
LMNA-213ENST00000473598 A6NLC8 198 aa12.66□□□□□ -0.38
LMNA-213ENST00000473598 SFTA3P0C7M3 94 aa12.66□□□□□ -0.38
LMNA-213ENST00000473598 CAV2P51636 162 aa12.66□□□□□ -0.38
LMNA-213ENST00000473598 UCP2P55851 309 aa12.66□□□□□ -0.38
LMNA-213ENST00000473598 TNFRSF9Q07011 255 aa12.66□□□□□ -0.38
LMNA-213ENST00000473598 UBE2V2Q15819 145 aa12.66□□□□□ -0.38
LMNA-213ENST00000473598 C1orf100Q5SVJ3 147 aa12.66□□□□□ -0.38
LMNA-213ENST00000473598 C11orf87Q6NUJ2 197 aa12.66□□□□□ -0.38
LMNA-213ENST00000473598 C22orf34Q6ZV56 151 aa12.66□□□□□ -0.38
LMNA-213ENST00000473598 RHBDD3Q9Y3P4 386 aa12.66□□□□□ -0.38
LMNA-213ENST00000473598 POMT1Q9Y6A1 747 aa12.66□□□□□ -0.38
LMNA-213ENST00000473598 IFITM10A6NMD0 228 aa12.66□□□□□ -0.38
LMNA-213ENST00000473598 OR2AT4A6NND4 320 aa12.66□□□□□ -0.38
LMNA-213ENST00000473598 SEC14L6B5MCN3 397 aa12.66□□□□□ -0.38
LMNA-213ENST00000473598 H7C417 338 aa12.66□□□□□ -0.38
LMNA-213ENST00000473598 ZG16O60844 167 aa12.66□□□□□ -0.38
LMNA-213ENST00000473598 TPT1P13693 172 aaKnown RBP12.66□□□□□ -0.38
LMNA-213ENST00000473598 RPS2P15880 293 aaKnown RBP12.66□□□□□ -0.38
LMNA-213ENST00000473598 ASCL1P50553 236 aa12.66□□□□□ -0.38
LMNA-213ENST00000473598 ZNF83P51522 516 aa12.66□□□□□ -0.38
LMNA-213ENST00000473598 RSU1Q15404 277 aa12.66□□□□□ -0.38
LMNA-213ENST00000473598 OR8G1Q15617 311 aa12.66□□□□□ -0.38
LMNA-213ENST00000473598 TMEM42Q69YG0 159 aa12.66□□□□□ -0.38
LMNA-213ENST00000473598 SPNS3Q6ZMD2 512 aa12.66□□□□□ -0.38
LMNA-213ENST00000473598 JAGN1Q8N5M9 183 aa12.66□□□□□ -0.38
LMNA-213ENST00000473598 OR56B1Q8NGI3 324 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms