RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 GTF2A1LQ9UNN4 478 aa7.55□□□□□ -1.2
MCF2L-223ENST00000473345 TPRKBQ9Y3C4 175 aa7.55□□□□□ -1.2
MCF2L-223ENST00000473345 R4GMQ9 66 aa7.55□□□□□ -1.2
MCF2L-223ENST00000473345 A0A087WXM4 84 aa7.54□□□□□ -1.2
MCF2L-223ENST00000473345 LMO1P25800 156 aa7.54□□□□□ -1.2
MCF2L-223ENST00000473345 MYCNOSP40205 109 aa7.54□□□□□ -1.2
MCF2L-223ENST00000473345 KIR3DL2P43630 455 aa7.54□□□□□ -1.2
MCF2L-223ENST00000473345 RIDAP52758 137 aaKnown RBP7.54□□□□□ -1.2
MCF2L-223ENST00000473345 TMED1Q13445 227 aa7.54□□□□□ -1.2
MCF2L-223ENST00000473345 ZNF146Q15072 292 aa7.54□□□□□ -1.2
MCF2L-223ENST00000473345 RNLSQ5VYX0 342 aa7.54□□□□□ -1.2
MCF2L-223ENST00000473345 KCTD18Q6PI47 426 aaPredicted RBP7.54□□□□□ -1.2
MCF2L-223ENST00000473345 ZNF773Q6PK81 442 aa7.54□□□□□ -1.2
MCF2L-223ENST00000473345 ZNF322Q6U7Q0 402 aaPredicted RBP7.54□□□□□ -1.2
MCF2L-223ENST00000473345 HEPN1Q6WQI6 88 aa7.54□□□□□ -1.2
MCF2L-223ENST00000473345 RDH10Q8IZV5 341 aa7.54□□□□□ -1.2
MCF2L-223ENST00000473345 PRSS35Q8N3Z0 413 aa7.54□□□□□ -1.2
MCF2L-223ENST00000473345 DRAM1Q8N682 238 aa7.54□□□□□ -1.2
MCF2L-223ENST00000473345 OR56B4Q8NH76 319 aa7.54□□□□□ -1.2
MCF2L-223ENST00000473345 CAPSLQ8WWF8 208 aa7.54□□□□□ -1.2
MCF2L-223ENST00000473345 GGHQ92820 318 aa7.54□□□□□ -1.2
MCF2L-223ENST00000473345 CORO2AQ92828 525 aa7.54□□□□□ -1.2
MCF2L-223ENST00000473345 ADAT3Q96EY9 351 aaPredicted RBP7.54□□□□□ -1.2
MCF2L-223ENST00000473345 MROQ9BYG7 248 aa7.54□□□□□ -1.2
MCF2L-223ENST00000473345 MRPS26Q9BYN8 205 aaKnown RBP7.54□□□□□ -1.2
MCF2L-223ENST00000473345 SEBOXQ9HB31 216 aaPredicted RBP7.54□□□□□ -1.2
MCF2L-223ENST00000473345 ING3Q9NXR8 418 aa7.54□□□□□ -1.2
MCF2L-223ENST00000473345 SCN3BQ9NY72 215 aa7.54□□□□□ -1.2
MCF2L-223ENST00000473345 ZNF581Q9P0T4 197 aa7.54□□□□□ -1.2
MCF2L-223ENST00000473345 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.54□□□□□ -1.2
MCF2L-223ENST00000473345 TMEM14AQ9Y6G1 99 aa7.54□□□□□ -1.2
MCF2L-223ENST00000473345 CSMD3Q7Z407 3707 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 A0A087X0M5 115 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 TRBV2A0A0J9YWF9 115 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 LCE6AA0A183 80 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 A0A1B0GX30 115 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 EFCAB10A6NFE3 127 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 DHRS7CA6NNS2 312 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 NUDT19A8MXV4 375 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 LEUTXA8MZ59 168 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 H3BUI4 141 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 CCL24O00175 119 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 MGST3O14880 152 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 ZNF254O75437 659 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 RPP14O95059 124 aaKnown RBP7.53□□□□□ -1.2
MCF2L-223ENST00000473345 APOL3O95236 402 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 OR2H2O95918 312 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 DBTP11182 482 aaKnown RBP7.53□□□□□ -1.2
MCF2L-223ENST00000473345 ERP29P30040 261 aaKnown RBP7.53□□□□□ -1.2
MCF2L-223ENST00000473345 HTR1FP30939 366 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 ECI1P42126 302 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 ALDH3B2P48448 385 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 HNF4GQ14541 408 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 IRF3Q14653 427 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 ZNF829Q3KNS6 432 aaPredicted RBP7.53□□□□□ -1.2
MCF2L-223ENST00000473345 BCL2L15Q5TBC7 163 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 Q6P435 159 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 PRSS48Q7RTY5 328 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 TRAPPC6BQ86SZ2 158 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 CATSPERDQ86XM0 798 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 ZNF695Q8IW36 515 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 SLC35F2Q8IXU6 374 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 SPARTQ8N0X7 666 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 FAM58AQ8N1B3 248 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 ASB17Q8WXJ9 295 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 RFKQ969G6 155 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 RFT1Q96AA3 541 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 JAM3Q9BX67 310 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 CHST5Q9GZS9 411 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 FGF20Q9NP95 211 aaPredicted RBP7.53□□□□□ -1.2
MCF2L-223ENST00000473345 BATF3Q9NR55 127 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 SLC7A11Q9UPY5 501 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 EXOGQ9Y2C4 368 aaKnown RBP7.53□□□□□ -1.2
MCF2L-223ENST00000473345 UBE2J1Q9Y385 318 aaPredicted RBP7.53□□□□□ -1.2
MCF2L-223ENST00000473345 MOB4Q9Y3A3 225 aa7.53□□□□□ -1.2
MCF2L-223ENST00000473345 RPL36Q9Y3U8 105 aaKnown RBP7.53□□□□□ -1.2
MCF2L-223ENST00000473345 A0A1W2PPE3 182 aa7.52□□□□□ -1.21
MCF2L-223ENST00000473345 SNTNA6NMZ2 147 aa7.52□□□□□ -1.21
MCF2L-223ENST00000473345 PTGES3LE9PB15 166 aa7.52□□□□□ -1.21
MCF2L-223ENST00000473345 J3QRE1 110 aa7.52□□□□□ -1.21
MCF2L-223ENST00000473345 IGHG2P01859 326 aa7.52□□□□□ -1.21
MCF2L-223ENST00000473345 CDK1P06493 297 aa7.52□□□□□ -1.21
MCF2L-223ENST00000473345 PRKACAP17612 351 aa7.52□□□□□ -1.21
MCF2L-223ENST00000473345 BRS3P32247 399 aa7.52□□□□□ -1.21
MCF2L-223ENST00000473345 POU3F4P49335 361 aa7.52□□□□□ -1.21
MCF2L-223ENST00000473345 RAB25P57735 213 aa7.52□□□□□ -1.21
MCF2L-223ENST00000473345 CFHR3Q02985 330 aa7.52□□□□□ -1.21
MCF2L-223ENST00000473345 ST3GAL4Q11206 333 aa7.52□□□□□ -1.21
MCF2L-223ENST00000473345 RAB40BQ12829 278 aa7.52□□□□□ -1.21
MCF2L-223ENST00000473345 RBM39Q14498 530 aaKnown RBP7.52□□□□□ -1.21
MCF2L-223ENST00000473345 CDK5R1Q15078 307 aa7.52□□□□□ -1.21
MCF2L-223ENST00000473345 KLHL22Q53GT1 634 aa7.52□□□□□ -1.21
MCF2L-223ENST00000473345 XAF1Q6GPH4 301 aa7.52□□□□□ -1.21
MCF2L-223ENST00000473345 MEPCEQ7L2J0 689 aaKnown RBP7.52□□□□□ -1.21
MCF2L-223ENST00000473345 GID4Q8IVV7 300 aa7.52□□□□□ -1.21
MCF2L-223ENST00000473345 STPG2Q8N412 459 aa7.52□□□□□ -1.21
MCF2L-223ENST00000473345 OR51D1Q8NGF3 324 aa7.52□□□□□ -1.21
MCF2L-223ENST00000473345 OR10AC1Q8NH08 325 aa7.52□□□□□ -1.21
MCF2L-223ENST00000473345 ZNF596Q8TC21 504 aa7.52□□□□□ -1.21
MCF2L-223ENST00000473345 DPF1Q92782 380 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms