RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 ZNF440Q8IYI8 595 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 VN1R2Q8NFZ6 395 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 OR8G5Q8NG78 346 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 OR56B2PQ8NGI1 322 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 OR5D14Q8NGL3 314 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 KCNG3Q8TAE7 436 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 SCGB1C1Q8TD33 95 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 DAZLQ92904 295 aaKnown RBP3.68□□□□□ -1.82
VPS50-210ENST00000471188 ADIPOR1Q96A54 375 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 TSPAN32Q96QS1 320 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 PARLQ9H300 379 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.68□□□□□ -1.82
VPS50-210ENST00000471188 ZNF586Q9NXT0 402 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 SLC5A6Q9Y289 635 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 NUP210Q8TEM1 1887 aaPredicted RBP3.68□□□□□ -1.82
VPS50-210ENST00000471188 TRPM6Q9BX84 2022 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 TRAV30A0A087WSZ9 112 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 A0A0A6YYD4 124 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 IGKV1-8A0A0C4DH67 115 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 A0A1W2PRS3 328 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 ODAMA1E959 279 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 ETV2O00321 342 aaPredicted RBP3.68□□□□□ -1.82
VPS50-210ENST00000471188 SERF1AO75920 110 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 CTSDP07339 412 aaPredicted RBP3.68□□□□□ -1.82
VPS50-210ENST00000471188 ZNF728P0DKX0 622 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 CRISP2P16562 243 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 TCN2P20062 427 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 PMCHP20382 165 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 IL3RAP26951 378 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 OPRM1P35372 400 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 GABRA2P47869 451 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 OR3A4PP47883 348 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 SLC11A1P49279 550 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 TMEM50BP56557 158 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 PPP1CBP62140 327 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 RPL23P62829 140 aaKnown RBP3.68□□□□□ -1.82
VPS50-210ENST00000471188 NHLH1Q02575 133 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 SNAI3Q3KNW1 292 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 CLLU1OSQ5K130 101 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 KLHL24Q6TFL4 600 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 FAM57BQ71RH2 274 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 ZNF765Q7L2R6 523 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 RNF144BQ7Z419 303 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 LHFPL1Q86WI0 220 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 NIT1Q86X76 327 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 CATSPERDQ86XM0 798 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 TMEM252Q8N6L7 170 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 NUS1Q96E22 293 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 ADAT3Q96EY9 351 aaPredicted RBP3.68□□□□□ -1.82
VPS50-210ENST00000471188 MRGPRX1Q96LB2 322 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 SLC46A1Q96NT5 459 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 RASL10BQ96S79 203 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 IMMP2LQ96T52 175 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 RSG1Q9BU20 258 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 PLK3Q9H4B4 646 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 ZNF703Q9H7S9 590 aaPredicted RBP3.68□□□□□ -1.82
VPS50-210ENST00000471188 PLEKHF2Q9H8W4 249 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 RPRMQ9NS64 109 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 SOHLH2Q9NX45 425 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 CISD1Q9NZ45 108 aaKnown RBP3.68□□□□□ -1.82
VPS50-210ENST00000471188 SLC45A2Q9UMX9 530 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 C19orf53Q9UNZ5 99 aaPredicted RBP3.68□□□□□ -1.82
VPS50-210ENST00000471188 GPR34Q9UPC5 381 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 A0A1W2PPV9 198 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 CRYM-AS1A6NIL9 109 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 HSPB2A8KAH6 182 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 CXCL11O14625 94 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 PRKNO60260 465 aaPredicted RBP3.68□□□□□ -1.82
VPS50-210ENST00000471188 GNG7O60262 68 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 PITX3O75364 302 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 ZNF737O75373 536 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 HYPMO75409 117 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 TOX4O94842 621 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 NUDT14O95848 222 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 TTRP02766 147 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 HOXB2P14652 356 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 HMGA1P17096 107 aaKnown RBP3.68□□□□□ -1.82
VPS50-210ENST00000471188 VIPR2P41587 438 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 SLC6A8P48029 635 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 AMTP48728 403 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 PAFAH1B2P68402 229 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 SHBQ15464 509 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 HSPB2Q16082 182 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 ACKR1Q16570 336 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 METRNLQ641Q3 311 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 C20orf204Q6ZNR8 217 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 LHFPL4Q7Z7J7 247 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 H1FOOQ8IZA3 346 aaPredicted RBP3.68□□□□□ -1.82
VPS50-210ENST00000471188 KLHDC1Q8N7A1 406 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 OR2A1Q8NGT9 310 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 OR4F5Q8NH21 305 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 LHX4Q969G2 390 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 FAM71F1Q96KD3 344 aaPredicted RBP3.68□□□□□ -1.82
VPS50-210ENST00000471188 OR4F4Q96R69 305 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 RBM24Q9BX46 236 aaKnown RBP3.68□□□□□ -1.82
VPS50-210ENST00000471188 FOXQ1Q9C009 403 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 OR10A2Q9H208 303 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 HIPK2Q9H2X6 1198 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 NAA60Q9H7X0 242 aa3.68□□□□□ -1.82
VPS50-210ENST00000471188 ZNF286AQ9HBT8 521 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms