RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 LDLRAD4O15165 306 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 TAPBPO15533 448 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 PAGE4O60829 102 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 FOXO1Q12778 655 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 TMEM78Q5T7P6 136 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 TMEM211Q6ICI0 200 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 NHLRC1Q6VVB1 395 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 Q7L0L9 218 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 MDP1Q86V88 176 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 ADAMTS5Q9UNA0 930 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 BCL9LQ86UU0 1499 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 ZGLP1P0C6A0 271 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 CKS2P33552 79 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 TMEM33P57088 247 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 PFN3P60673 137 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 SLC35B1P78383 322 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 ZNF252P-AS1Q0IIN9 211 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 COL9A3Q14050 684 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-210ENST00000471181 CDK5R1Q15078 307 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 GLDNQ6ZMI3 551 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-210ENST00000471181 PDLIM5Q96HC4 596 aaKnown RBP6.12□□□□□ -1.43
BRCA1-210ENST00000471181 CDX2Q99626 313 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-210ENST00000471181 POMT2Q9UKY4 750 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 C19orf53Q9UNZ5 99 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-210ENST00000471181 HCFC2Q9Y5Z7 792 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 SLIT2O94813 1529 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 TAF1LQ8IZX4 1826 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 PPM1DO15297 605 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 NUBP1P53384 320 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 TCEAL1Q15170 157 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 STXBP6Q8NFX7 210 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 ASB5Q8WWX0 329 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 MS4A6EQ96DS6 147 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 ZNF576Q9H609 170 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 TRAV38-1A0A0B4J264 116 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 MMP9P14780 707 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 ZNF774Q6NX45 483 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 ZNF793Q6ZN11 406 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 ERASQ7Z444 233 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 OR2C3Q8N628 320 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 VSTM2AQ8TAG5 236 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 PATE1Q8WXA2 126 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 ZNF665Q9H7R5 613 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 IGHV3OR15-7A0A075B7D8 119 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 CDS2O95674 445 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 KRTCAP3Q53RY4 240 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 TEX30Q5JUR7 227 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 SLC23A3Q6PIS1 610 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 BHLHA15Q7RTS1 189 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-210ENST00000471181 RTN4RL1Q86UN2 441 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-210ENST00000471181 RNF133Q8WVZ7 376 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 NEU1Q99519 415 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 GHITMQ9H3K2 345 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 GLRX2Q9NS18 164 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 DAPP1Q9UN19 280 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 B9D1Q9UPM9 204 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 KAT6AQ92794 2004 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 TRAV12-3A0A0B4J271 114 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 FFAR1O14842 300 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 ID4P47928 161 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 POLR2GP62487 172 aaKnown RBP eCLIP6.11□□□□□ -1.43
BRCA1-210ENST00000471181 MGAT2Q10469 447 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 PPP1R1AQ13522 171 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 NSUN5P2Q63ZY6 315 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 OR5A1Q8NGJ0 315 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 GMPPAQ96IJ6 420 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-210ENST00000471181 GUCD1Q96NT3 240 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 GPR82Q96P67 336 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 CHODLQ9H9P2 273 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 NXT2Q9NPJ8 142 aaKnown RBP6.11□□□□□ -1.43
BRCA1-210ENST00000471181 INSIG2Q9Y5U4 225 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 C9orf170A2RU37 121 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 CCL7P80098 99 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 HTRA3P83110 453 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 IL13RA2Q14627 380 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 COX19Q49B96 90 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 SAPCD1Q5SSQ6 148 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 OR8D4Q8NGM9 314 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 C16orf52Q8NHV5 167 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 RGP1Q92546 391 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-210ENST00000471181 MAP1LC3AQ9H492 121 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 HCSTQ9UBK5 93 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 TBC1D29Q9UFV1 150 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 PHLDA3Q9Y5J5 127 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 NHSQ6T4R5 1651 aa6.11□□□□□ -1.43
BRCA1-210ENST00000471181 TRBV7-9A0A0J9YWB2 115 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 A0A1W2PR48 441 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 LINC01553A4QN01 128 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 PRR32B1ATL7 298 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 AGFG2O95081 481 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 INHBBP09529 407 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 TMIGD3P0DMS9 266 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-210ENST00000471181 HTN3P15516 51 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 PPICP45877 212 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 REG1BP48304 166 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 VEGFBP49765 207 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 SSBP1Q04837 148 aaKnown RBP6.1□□□□□ -1.43
BRCA1-210ENST00000471181 MEF2CQ06413 473 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-210ENST00000471181 TMEM52BQ4KMG9 183 aa6.1□□□□□ -1.43
BRCA1-210ENST00000471181 PARM1Q6UWI2 310 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms