RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 TBL2Q9Y4P3 447 aaKnown RBP11.48□□□□□ -0.57
TOP3B-215ENST00000470338 FBN3Q75N90 2809 aa11.48□□□□□ -0.57
TOP3B-215ENST00000470338 A0A1B0GUS0 222 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 MEGF11A6BM72 1044 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 BTBD17A6NE02 478 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 HAX1O00165 279 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 CLPXO76031 633 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 ARG1P05089 322 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 CGB3P0DN86 165 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 CGB7P0DN87 165 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 SERPINA2P20848 420 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 MDKP21741 143 aaPredicted RBP11.47□□□□□ -0.57
TOP3B-215ENST00000470338 OMGP23515 440 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 KCNJ3P48549 501 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 TPBGQ13641 420 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 GPR176Q14439 515 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 INSL4Q14641 139 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 ATXN7L3Q14CW9 347 aaPredicted RBP11.47□□□□□ -0.57
TOP3B-215ENST00000470338 LDLRAD2Q5SZI1 272 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 LHFPL4Q7Z7J7 247 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 TRAPPC6BQ86SZ2 158 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 LINC00596Q86U02 117 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 JAGN1Q8N5M9 183 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 NKAIN3Q8N8D7 197 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 MUL1Q969V5 352 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 MALSU1Q96EH3 234 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 SSX3Q99909 188 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 TMED9Q9BVK6 235 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 BARHL1Q9BZE3 327 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 PPIL3Q9H2H8 161 aaKnown RBP11.47□□□□□ -0.57
TOP3B-215ENST00000470338 TMEM133Q9H2Q1 129 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 ZNF581Q9P0T4 197 aa11.47□□□□□ -0.57
TOP3B-215ENST00000470338 MRPS28Q9Y2Q9 187 aaKnown RBP11.47□□□□□ -0.57
TOP3B-215ENST00000470338 IGHV2-26A0A0B4J1V2 119 aa11.46□□□□□ -0.57
TOP3B-215ENST00000470338 A0A1W2PP11 408 aa11.46□□□□□ -0.57
TOP3B-215ENST00000470338 ZNF729A6NN14 1252 aaPredicted RBP11.46□□□□□ -0.57
TOP3B-215ENST00000470338 GEMIN2O14893 280 aaKnown RBP11.46□□□□□ -0.57
TOP3B-215ENST00000470338 GTF2F2P13984 249 aa11.46□□□□□ -0.57
TOP3B-215ENST00000470338 RAG2P55895 527 aa11.46□□□□□ -0.57
TOP3B-215ENST00000470338 MPV17LQ2QL34 196 aa11.46□□□□□ -0.57
TOP3B-215ENST00000470338 LRRC75BQ2VPJ9 315 aa11.46□□□□□ -0.57
TOP3B-215ENST00000470338 SLC22A6Q4U2R8 563 aa11.46□□□□□ -0.57
TOP3B-215ENST00000470338 RSBN1Q5VWQ0 802 aaPredicted RBP11.46□□□□□ -0.57
TOP3B-215ENST00000470338 LIPKQ5VXJ0 399 aa11.46□□□□□ -0.57
TOP3B-215ENST00000470338 OR52W1Q6IF63 320 aa11.46□□□□□ -0.57
TOP3B-215ENST00000470338 GLIPR1L1Q6UWM5 242 aa11.46□□□□□ -0.57
TOP3B-215ENST00000470338 DYNAPQ8N1N2 210 aa11.46□□□□□ -0.57
TOP3B-215ENST00000470338 SUMF2Q8NBJ7 301 aa11.46□□□□□ -0.57
TOP3B-215ENST00000470338 OR4D6Q8NGJ1 314 aa11.46□□□□□ -0.57
TOP3B-215ENST00000470338 OR4F5Q8NH21 305 aa11.46□□□□□ -0.57
TOP3B-215ENST00000470338 PLPPR1Q8TBJ4 325 aa11.46□□□□□ -0.57
TOP3B-215ENST00000470338 PIFOQ8TCI5 191 aa11.46□□□□□ -0.57
TOP3B-215ENST00000470338 PHYHIPQ92561 330 aa11.46□□□□□ -0.57
TOP3B-215ENST00000470338 UFD1Q92890 307 aa11.46□□□□□ -0.57
TOP3B-215ENST00000470338 MRPS24Q96EL2 167 aaKnown RBP11.46□□□□□ -0.57
TOP3B-215ENST00000470338 UQCC2Q9BRT2 126 aa11.46□□□□□ -0.57
TOP3B-215ENST00000470338 OR6C3Q9NZP0 311 aa11.46□□□□□ -0.57
TOP3B-215ENST00000470338 VGLL3A8MV65 326 aa11.45□□□□□ -0.58
TOP3B-215ENST00000470338 H3BUX3 64 aa11.45□□□□□ -0.58
TOP3B-215ENST00000470338 HSPB6O14558 160 aa11.45□□□□□ -0.58
TOP3B-215ENST00000470338 OR7C1O76099 320 aaPredicted RBP11.45□□□□□ -0.58
TOP3B-215ENST00000470338 UCHL1P09936 223 aa11.45□□□□□ -0.58
TOP3B-215ENST00000470338 CD37P11049 281 aa11.45□□□□□ -0.58
TOP3B-215ENST00000470338 CPEP16870 476 aa11.45□□□□□ -0.58
TOP3B-215ENST00000470338 CDK2P24941 298 aa11.45□□□□□ -0.58
TOP3B-215ENST00000470338 PAX6P26367 422 aa11.45□□□□□ -0.58
TOP3B-215ENST00000470338 MLLT11Q13015 90 aaPredicted RBP11.45□□□□□ -0.58
TOP3B-215ENST00000470338 C17orf58Q2M2W7 97 aa11.45□□□□□ -0.58
TOP3B-215ENST00000470338 FAM27D1Q5T7N8 215 aa11.45□□□□□ -0.58
TOP3B-215ENST00000470338 MINOS1Q5TGZ0 78 aa11.45□□□□□ -0.58
TOP3B-215ENST00000470338 PRAMEF5Q5TYX0 476 aa11.45□□□□□ -0.58
TOP3B-215ENST00000470338 CEACAM19Q7Z692 300 aa11.45□□□□□ -0.58
TOP3B-215ENST00000470338 LRRTM1Q86UE6 522 aa11.45□□□□□ -0.58
TOP3B-215ENST00000470338 ZNF565Q8N9K5 539 aa11.45□□□□□ -0.58
TOP3B-215ENST00000470338 FOXRED1Q96CU9 486 aaPredicted RBP11.45□□□□□ -0.58
TOP3B-215ENST00000470338 DPCDQ9BVM2 203 aaPredicted RBP11.45□□□□□ -0.58
TOP3B-215ENST00000470338 CLEC7AQ9BXN2 247 aa11.45□□□□□ -0.58
TOP3B-215ENST00000470338 CCDC90BQ9GZT6 254 aa11.45□□□□□ -0.58
TOP3B-215ENST00000470338 LINC00574Q9H8X3 128 aa11.45□□□□□ -0.58
TOP3B-215ENST00000470338 BEX1Q9HBH7 125 aa11.45□□□□□ -0.58
TOP3B-215ENST00000470338 TCF7L1Q9HCS4 588 aa11.45□□□□□ -0.58
TOP3B-215ENST00000470338 ING3Q9NXR8 418 aa11.45□□□□□ -0.58
TOP3B-215ENST00000470338 KIF25Q9UIL4 384 aa11.45□□□□□ -0.58
TOP3B-215ENST00000470338 BLOC1S6Q9UL45 172 aa11.45□□□□□ -0.58
TOP3B-215ENST00000470338 MINOS1-NBL1R4GNA1 71 aa11.45□□□□□ -0.58
TOP3B-215ENST00000470338 MEIKINA0A087WXM9 373 aa11.44□□□□□ -0.58
TOP3B-215ENST00000470338 A0A087X0M5 115 aa11.44□□□□□ -0.58
TOP3B-215ENST00000470338 KBTBD11-OT1A0A1B0GTJ5 212 aa11.44□□□□□ -0.58
TOP3B-215ENST00000470338 A0A1B0GX30 115 aa11.44□□□□□ -0.58
TOP3B-215ENST00000470338 DENRO43583 198 aaKnown RBP11.44□□□□□ -0.58
TOP3B-215ENST00000470338 HSMCR30P0CW71 290 aa11.44□□□□□ -0.58
TOP3B-215ENST00000470338 SRMP19623 302 aa11.44□□□□□ -0.58
TOP3B-215ENST00000470338 CD34P28906 385 aa11.44□□□□□ -0.58
TOP3B-215ENST00000470338 GDNFP39905 211 aa11.44□□□□□ -0.58
TOP3B-215ENST00000470338 MAP2K4P45985 399 aa11.44□□□□□ -0.58
TOP3B-215ENST00000470338 DYNC1I2Q13409 638 aaKnown RBP11.44□□□□□ -0.58
TOP3B-215ENST00000470338 TRAM1Q15629 374 aa11.44□□□□□ -0.58
TOP3B-215ENST00000470338 AWAT2Q6E213 333 aa11.44□□□□□ -0.58
TOP3B-215ENST00000470338 SLC35E4Q6ICL7 350 aa11.44□□□□□ -0.58
TOP3B-215ENST00000470338 SHISA2Q6UWI4 295 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms