RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 UMAD1C9J7I0 102 aa17.32■□□□□ 0.36
CDHR3-207ENST00000470188 PDCD6O75340 191 aa17.32■□□□□ 0.36
CDHR3-207ENST00000470188 HLA-HP01893 362 aa17.32■□□□□ 0.36
CDHR3-207ENST00000470188 FAM24BQ8N5W8 94 aa17.32■□□□□ 0.36
CDHR3-207ENST00000470188 ZNF611Q8N823 705 aa17.32■□□□□ 0.36
CDHR3-207ENST00000470188 TOMM40LQ969M1 308 aa17.32■□□□□ 0.36
CDHR3-207ENST00000470188 PIGPP57054 158 aa17.31■□□□□ 0.36
CDHR3-207ENST00000470188 RAB2AP61019 212 aa17.31■□□□□ 0.36
CDHR3-207ENST00000470188 PDCD1Q15116 288 aa17.31■□□□□ 0.36
CDHR3-207ENST00000470188 TGIF1Q15583 401 aa17.31■□□□□ 0.36
CDHR3-207ENST00000470188 ADAM5Q6NVV9 412 aa17.31■□□□□ 0.36
CDHR3-207ENST00000470188 SLC22A25Q6T423 547 aa17.31■□□□□ 0.36
CDHR3-207ENST00000470188 SLC25A26Q70HW3 274 aa17.31■□□□□ 0.36
CDHR3-207ENST00000470188 OR56B2PQ8NGI1 322 aa17.31■□□□□ 0.36
CDHR3-207ENST00000470188 MARS2Q96GW9 593 aaKnown RBP17.31■□□□□ 0.36
CDHR3-207ENST00000470188 E5RGE8 158 aa17.3■□□□□ 0.36
CDHR3-207ENST00000470188 PPIHO43447 177 aaKnown RBP17.3■□□□□ 0.36
CDHR3-207ENST00000470188 ZNF205O95201 554 aa17.3■□□□□ 0.36
CDHR3-207ENST00000470188 ZNF728P0DKX0 622 aa17.3■□□□□ 0.36
CDHR3-207ENST00000470188 FOXG1P55316 489 aaPredicted RBP17.3■□□□□ 0.36
CDHR3-207ENST00000470188 GINS3Q9BRX5 216 aa17.3■□□□□ 0.36
CDHR3-207ENST00000470188 RSRP1Q9BUV0 290 aa17.3■□□□□ 0.36
CDHR3-207ENST00000470188 PAPOLGQ9BWT3 736 aaKnown RBP17.3■□□□□ 0.36
CDHR3-207ENST00000470188 SMIM3Q9BZL3 60 aa17.3■□□□□ 0.36
CDHR3-207ENST00000470188 SLC35B3Q9H1N7 401 aa17.3■□□□□ 0.36
CDHR3-207ENST00000470188 ZNF286AQ9HBT8 521 aa17.3■□□□□ 0.36
CDHR3-207ENST00000470188 KCNJ16Q9NPI9 418 aa17.3■□□□□ 0.36
CDHR3-207ENST00000470188 IL17BQ9UHF5 180 aa17.3■□□□□ 0.36
CDHR3-207ENST00000470188 NSG2Q9Y328 171 aa17.3■□□□□ 0.36
CDHR3-207ENST00000470188 AHCTF1Q8WYP5 2266 aa17.3■□□□□ 0.36
CDHR3-207ENST00000470188 C5orf49A4QMS7 147 aa17.3■□□□□ 0.36
CDHR3-207ENST00000470188 ZNF729A6NN14 1252 aaPredicted RBP17.3■□□□□ 0.36
CDHR3-207ENST00000470188 NME2P1O60361 137 aa17.3■□□□□ 0.36
CDHR3-207ENST00000470188 CCL2P13500 99 aa17.3■□□□□ 0.36
CDHR3-207ENST00000470188 HAAOP46952 286 aa17.3■□□□□ 0.36
CDHR3-207ENST00000470188 CAMLGP49069 296 aa17.3■□□□□ 0.36
CDHR3-207ENST00000470188 ZNF616Q08AN1 781 aa17.3■□□□□ 0.36
CDHR3-207ENST00000470188 APH1AQ96BI3 265 aa17.3■□□□□ 0.36
CDHR3-207ENST00000470188 REPIN1Q9BWE0 567 aaKnown RBP17.3■□□□□ 0.36
CDHR3-207ENST00000470188 SMDT1Q9H4I9 107 aa17.3■□□□□ 0.36
CDHR3-207ENST00000470188 GPR179Q6PRD1 2367 aa17.3■□□□□ 0.36
CDHR3-207ENST00000470188 A0A1B0GW64 132 aa17.29■□□□□ 0.36
CDHR3-207ENST00000470188 ZNF724A8MTY0 619 aa17.29■□□□□ 0.36
CDHR3-207ENST00000470188 FXYD4P59646 89 aa17.29■□□□□ 0.36
CDHR3-207ENST00000470188 ABCA11PQ4W5N1 156 aa17.29■□□□□ 0.36
CDHR3-207ENST00000470188 DHRS13Q6UX07 377 aa17.29■□□□□ 0.36
CDHR3-207ENST00000470188 ZNF565Q8N9K5 539 aa17.29■□□□□ 0.36
CDHR3-207ENST00000470188 LFNGQ8NES3 379 aa17.29■□□□□ 0.36
CDHR3-207ENST00000470188 TOLLIPQ9H0E2 274 aa17.29■□□□□ 0.36
CDHR3-207ENST00000470188 C19orf12Q9NSK7 152 aa17.29■□□□□ 0.36
CDHR3-207ENST00000470188 LSM5Q9Y4Y9 91 aaKnown RBP17.29■□□□□ 0.36
CDHR3-207ENST00000470188 ZNHIT1O43257 154 aa17.29■□□□□ 0.36
CDHR3-207ENST00000470188 OR7C1O76099 320 aaPredicted RBP17.29■□□□□ 0.36
CDHR3-207ENST00000470188 DAOP14920 347 aa17.29■□□□□ 0.36
CDHR3-207ENST00000470188 FUT3P21217 361 aa17.29■□□□□ 0.36
CDHR3-207ENST00000470188 LMO1P25800 156 aa17.29■□□□□ 0.36
CDHR3-207ENST00000470188 P2RY1P47900 373 aa17.29■□□□□ 0.36
CDHR3-207ENST00000470188 NPBWR2P48146 333 aa17.29■□□□□ 0.36
CDHR3-207ENST00000470188 OR2B8PP59922 312 aa17.29■□□□□ 0.36
CDHR3-207ENST00000470188 GGNBP1Q5YKI7 109 aa17.29■□□□□ 0.36
CDHR3-207ENST00000470188 BATF2Q8N1L9 274 aa17.29■□□□□ 0.36
CDHR3-207ENST00000470188 C20orf24Q9BUV8 137 aa17.29■□□□□ 0.36
CDHR3-207ENST00000470188 ZNF442Q9H7R0 627 aa17.29■□□□□ 0.36
CDHR3-207ENST00000470188 KCNIP3Q9Y2W7 256 aa17.29■□□□□ 0.36
CDHR3-207ENST00000470188 ZNF503-AS2A6NEH8 195 aa17.28■□□□□ 0.36
CDHR3-207ENST00000470188 TNFSF15O95150 251 aa17.28■□□□□ 0.36
CDHR3-207ENST00000470188 COX5BP10606 129 aa17.28■□□□□ 0.36
CDHR3-207ENST00000470188 PRDX4Q13162 271 aa17.28■□□□□ 0.36
CDHR3-207ENST00000470188 GPR157Q5UAW9 335 aa17.28■□□□□ 0.36
CDHR3-207ENST00000470188 MRPL21Q7Z2W9 205 aaKnown RBP17.28■□□□□ 0.36
CDHR3-207ENST00000470188 ERGIC1Q969X5 290 aa17.28■□□□□ 0.36
CDHR3-207ENST00000470188 MRPL24Q96A35 216 aaKnown RBP17.28■□□□□ 0.36
CDHR3-207ENST00000470188 GGACTQ9BVM4 153 aa17.28■□□□□ 0.36
CDHR3-207ENST00000470188 NAA60Q9H7X0 242 aa17.28■□□□□ 0.36
CDHR3-207ENST00000470188 SP1P08047 785 aa17.28■□□□□ 0.36
CDHR3-207ENST00000470188 MEOX1P50221 254 aa17.28■□□□□ 0.36
CDHR3-207ENST00000470188 C3AR1Q16581 482 aa17.28■□□□□ 0.36
CDHR3-207ENST00000470188 PARP12Q9H0J9 701 aaKnown RBP17.28■□□□□ 0.36
CDHR3-207ENST00000470188 KLF13Q9Y2Y9 288 aaPredicted RBP17.28■□□□□ 0.36
CDHR3-207ENST00000470188 KMT2EQ8IZD2 1858 aa17.27■□□□□ 0.36
CDHR3-207ENST00000470188 GPR137BO60478 399 aa17.27■□□□□ 0.36
CDHR3-207ENST00000470188 ARG1P05089 322 aa17.27■□□□□ 0.36
CDHR3-207ENST00000470188 HOXA5P20719 270 aa17.27■□□□□ 0.36
CDHR3-207ENST00000470188 CLINT1Q14677 625 aa17.27■□□□□ 0.36
CDHR3-207ENST00000470188 TMEM211Q6ICI0 200 aa17.27■□□□□ 0.36
CDHR3-207ENST00000470188 CD300LFQ8TDQ1 290 aa17.27■□□□□ 0.36
CDHR3-207ENST00000470188 RTN4IP1Q8WWV3 396 aaPredicted RBP17.27■□□□□ 0.36
CDHR3-207ENST00000470188 APOBEC3DQ96AK3 386 aaPredicted RBP17.27■□□□□ 0.36
CDHR3-207ENST00000470188 A0A1W2PPE2 198 aa17.26■□□□□ 0.35
CDHR3-207ENST00000470188 DAZAP2Q15038 168 aaPredicted RBP17.26■□□□□ 0.35
CDHR3-207ENST00000470188 RNPS1Q15287 305 aaKnown RBP17.26■□□□□ 0.35
CDHR3-207ENST00000470188 HES3Q5TGS1 186 aa17.26■□□□□ 0.35
CDHR3-207ENST00000470188 HEPN1Q6WQI6 88 aa17.26■□□□□ 0.35
CDHR3-207ENST00000470188 Q6ZPA2 131 aa17.26■□□□□ 0.35
CDHR3-207ENST00000470188 MCEMP1Q8IX19 187 aa17.26■□□□□ 0.35
CDHR3-207ENST00000470188 POM121Q96HA1 1249 aa17.26■□□□□ 0.35
CDHR3-207ENST00000470188 FER1L6-AS2Q96M78 137 aa17.26■□□□□ 0.35
CDHR3-207ENST00000470188 YPEL4Q96NS1 127 aa17.26■□□□□ 0.35
CDHR3-207ENST00000470188 TREM2Q9NZC2 230 aa17.26■□□□□ 0.35
CDHR3-207ENST00000470188 OR5AC1P0C628 307 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms