RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 MPZL2O60487 215 aa13.93□□□□□ -0.18
COL7A1-208ENST00000470076 ZFPL1O95159 310 aa13.93□□□□□ -0.18
COL7A1-208ENST00000470076 FADS2O95864 444 aaKnown RBP13.93□□□□□ -0.18
COL7A1-208ENST00000470076 PF4P02776 101 aa13.93□□□□□ -0.18
COL7A1-208ENST00000470076 AMY1AP04745 511 aa13.93□□□□□ -0.18
COL7A1-208ENST00000470076 AMY2AP04746 511 aa13.93□□□□□ -0.18
COL7A1-208ENST00000470076 CCDC159P0C7I6 412 aa13.93□□□□□ -0.18
COL7A1-208ENST00000470076 CGB3P0DN86 165 aa13.93□□□□□ -0.18
COL7A1-208ENST00000470076 CGB7P0DN87 165 aa13.93□□□□□ -0.18
COL7A1-208ENST00000470076 GABRB1P18505 474 aa13.93□□□□□ -0.18
COL7A1-208ENST00000470076 NFYBP25208 207 aa13.93□□□□□ -0.18
COL7A1-208ENST00000470076 RBM39Q14498 530 aaKnown RBP13.93□□□□□ -0.18
COL7A1-208ENST00000470076 ZNF691Q5VV52 312 aa13.93□□□□□ -0.18
COL7A1-208ENST00000470076 ELP2Q6IA86 826 aa13.93□□□□□ -0.18
COL7A1-208ENST00000470076 ZFP1Q6P2D0 407 aa13.93□□□□□ -0.18
COL7A1-208ENST00000470076 PXT1Q8NFP0 134 aa13.93□□□□□ -0.18
COL7A1-208ENST00000470076 OR5AK2Q8NH90 309 aa13.93□□□□□ -0.18
COL7A1-208ENST00000470076 Q96MT0 163 aa13.93□□□□□ -0.18
COL7A1-208ENST00000470076 ISG20L2Q9H9L3 353 aaKnown RBP13.93□□□□□ -0.18
COL7A1-208ENST00000470076 AASSQ9UDR5 926 aa13.93□□□□□ -0.18
COL7A1-208ENST00000470076 DHDHQ9UQ10 334 aa13.93□□□□□ -0.18
COL7A1-208ENST00000470076 AMMECR1Q9Y4X0 333 aaPredicted RBP13.93□□□□□ -0.18
COL7A1-208ENST00000470076 H3BNX3 289 aa13.92□□□□□ -0.18
COL7A1-208ENST00000470076 FAM106CPP0CH98 169 aa13.92□□□□□ -0.18
COL7A1-208ENST00000470076 C21orf33P30042 268 aaPredicted RBP13.92□□□□□ -0.18
COL7A1-208ENST00000470076 SLC35A2P78381 396 aa13.92□□□□□ -0.18
COL7A1-208ENST00000470076 PAN3Q58A45 887 aaKnown RBP13.92□□□□□ -0.18
COL7A1-208ENST00000470076 THNSL2Q86YJ6 484 aa13.92□□□□□ -0.18
COL7A1-208ENST00000470076 CBR4Q8N4T8 237 aa13.92□□□□□ -0.18
COL7A1-208ENST00000470076 HAVCR2Q8TDQ0 301 aa13.92□□□□□ -0.18
COL7A1-208ENST00000470076 TSEN15Q8WW01 171 aaKnown RBP13.92□□□□□ -0.18
COL7A1-208ENST00000470076 RPEQ96AT9 228 aa13.92□□□□□ -0.18
COL7A1-208ENST00000470076 BARHL1Q9BZE3 327 aa13.92□□□□□ -0.18
COL7A1-208ENST00000470076 ERVK13-1Q9NX77 482 aa13.92□□□□□ -0.18
COL7A1-208ENST00000470076 CALYQ9NYX4 217 aa13.92□□□□□ -0.18
COL7A1-208ENST00000470076 KIF25Q9UIL4 384 aa13.92□□□□□ -0.18
COL7A1-208ENST00000470076 MEIKINA0A087WXM9 373 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 FAM90A18PA6NE21 464 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 FAM90A16PA6NEW6 464 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 FAM90A20PA6NIJ5 464 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 FAM90A9PA6NNJ1 464 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 FAM90A12PA8MX19 464 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 FAM90A5PA8MXJ8 464 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 HSPB6O14558 160 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 MAGEB3O15480 346 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 DUS4LO95620 317 aaKnown RBP13.91□□□□□ -0.18
COL7A1-208ENST00000470076 CLIC3O95833 236 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 FAM90A15PP0C7V4 464 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 FAM90A13PP0C7W8 464 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 FAM90A14PP0C7W9 464 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 FAM90A24PP0C7X0 464 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 RAB3AP20336 220 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 GLP1RP43220 463 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 GBX2P52951 348 aaPredicted RBP13.91□□□□□ -0.18
COL7A1-208ENST00000470076 PAX5Q02548 391 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 RAB40BQ12829 278 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 IL13RA2Q14627 380 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 C9orf152Q5JTZ5 239 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 OSR2Q8N2R0 312 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 RHOXF1Q8NHV9 184 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 CNIH3Q8TBE1 160 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 TOMM40LQ969M1 308 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 RCC1LQ96I51 464 aaKnown RBP13.91□□□□□ -0.18
COL7A1-208ENST00000470076 NR1H4Q96RI1 486 aaPredicted RBP13.91□□□□□ -0.18
COL7A1-208ENST00000470076 GPER1Q99527 375 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 PDCD1LG2Q9BQ51 273 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 ZNF649Q9BS31 505 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 LINC00574Q9H8X3 128 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 MOB4Q9Y3A3 225 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 HSPE1-MOB4S4R3N1 261 aa13.91□□□□□ -0.18
COL7A1-208ENST00000470076 TRAV24A0A0B4J272 114 aa13.9□□□□□ -0.18
COL7A1-208ENST00000470076 SH2D7A6NKC9 451 aaPredicted RBP13.9□□□□□ -0.18
COL7A1-208ENST00000470076 E9PI62 339 aa13.9□□□□□ -0.18
COL7A1-208ENST00000470076 J3QR06 171 aa13.9□□□□□ -0.18
COL7A1-208ENST00000470076 IL1AP01583 271 aa13.9□□□□□ -0.18
COL7A1-208ENST00000470076 KCNJ3P48549 501 aa13.9□□□□□ -0.18
COL7A1-208ENST00000470076 KHDC1LQ5JSQ8 128 aa13.9□□□□□ -0.18
COL7A1-208ENST00000470076 UTF1Q5T230 341 aa13.9□□□□□ -0.18
COL7A1-208ENST00000470076 LPCAT4Q643R3 524 aa13.9□□□□□ -0.18
COL7A1-208ENST00000470076 ZNF529Q6P280 563 aa13.9□□□□□ -0.18
COL7A1-208ENST00000470076 Q8NFD4 153 aa13.9□□□□□ -0.18
COL7A1-208ENST00000470076 OR13A1Q8NGR1 328 aa13.9□□□□□ -0.18
COL7A1-208ENST00000470076 TNFAIP8L1Q8WVP5 186 aa13.9□□□□□ -0.18
COL7A1-208ENST00000470076 AMBNQ9NP70 447 aa13.9□□□□□ -0.18
COL7A1-208ENST00000470076 IDI2-AS1Q9NZ38 188 aa13.9□□□□□ -0.18
COL7A1-208ENST00000470076 GABRPO00591 440 aa13.89□□□□□ -0.19
COL7A1-208ENST00000470076 MADCAM1Q13477 382 aa13.89□□□□□ -0.19
COL7A1-208ENST00000470076 RSU1Q15404 277 aa13.89□□□□□ -0.19
COL7A1-208ENST00000470076 ZSCAN26Q16670 478 aa13.89□□□□□ -0.19
COL7A1-208ENST00000470076 C10orf99Q6UWK7 81 aa13.89□□□□□ -0.19
COL7A1-208ENST00000470076 SLC16A12Q6ZSM3 486 aa13.89□□□□□ -0.19
COL7A1-208ENST00000470076 SATL1Q86VE3 508 aa13.89□□□□□ -0.19
COL7A1-208ENST00000470076 C10orf67Q8IYJ2 551 aa13.89□□□□□ -0.19
COL7A1-208ENST00000470076 OR10A7Q8NGE5 316 aa13.89□□□□□ -0.19
COL7A1-208ENST00000470076 OR56B4Q8NH76 319 aa13.89□□□□□ -0.19
COL7A1-208ENST00000470076 C9orf16Q9BUW7 83 aa13.89□□□□□ -0.19
COL7A1-208ENST00000470076 MRPS18AQ9NVS2 196 aaKnown RBP13.89□□□□□ -0.19
COL7A1-208ENST00000470076 PSG11Q9UQ72 335 aa13.89□□□□□ -0.19
COL7A1-208ENST00000470076 PSMB11A5LHX3 300 aa13.88□□□□□ -0.19
COL7A1-208ENST00000470076 NPIPB11E5RHQ5 1161 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms