RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 MRPS7Q9Y2R9 242 aaKnown RBP6.79□□□□□ -1.32
NPHP3-204ENST00000469232 USF3Q68DE3 2245 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 SPG11Q96JI7 2443 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 A0A1W2PQ09 198 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 VWC2LB2RUY7 222 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 MCRIP1C9JLW8 97 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 PLA2G10O15496 165 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 DIRAS3O95661 229 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 MT-ND4P03905 459 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 RCVRNP35243 200 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 RBMXP38159 391 aaKnown RBP6.79□□□□□ -1.32
NPHP3-204ENST00000469232 CDKN1AP38936 164 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 GDNFP39905 211 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 KRTAP10-9P60411 292 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 COL10A1Q03692 680 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 PDCD1Q15116 288 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 STEAP3Q658P3 488 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 HOGA1Q86XE5 327 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 SNX29P2Q8IUI4 249 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 LYSMD2Q8IV50 215 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 OR8H2Q8N162 312 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 LRRC75A-AS1Q8N1F1 130 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 BATF2Q8N1L9 274 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 TMEM229BQ8NBD8 167 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 PLPPR1Q8TBJ4 325 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 SETD6Q8TBK2 473 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 MRPL30Q8TCC3 161 aaKnown RBP6.79□□□□□ -1.32
NPHP3-204ENST00000469232 FCAMRQ8WWV6 532 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 GCDHQ92947 438 aaPredicted RBP6.79□□□□□ -1.32
NPHP3-204ENST00000469232 COQ2Q96H96 371 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 MED30Q96HR3 178 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 CCL19Q99731 98 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 TMEM246Q9BRR3 403 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 LIME1Q9H400 295 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 ZNF665Q9H7R5 613 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 ZMAT3Q9HA38 289 aaKnown RBP6.79□□□□□ -1.32
NPHP3-204ENST00000469232 C12orf4Q9NQ89 552 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 TAS2R8Q9NYW2 309 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 KLK11Q9UBX7 282 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 EDARQ9UNE0 448 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 AKAP6Q13023 2319 aa6.79□□□□□ -1.32
NPHP3-204ENST00000469232 IGHV3OR15-7A0A075B7D8 119 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 LYNX1G3V0Z9 82 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 FAM229AH3BQW9 127 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 H7C1Q1 480 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 NDUFS8O00217 210 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 MGST3O14880 152 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 RBBP9O75884 186 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 TK1P04183 234 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 FCGR3AP08637 254 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 CD3GP09693 182 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 LYNX1P0DP58 116 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 ZNF44P15621 663 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 TBPP20226 339 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 CEBPDP49716 269 aaPredicted RBP6.78□□□□□ -1.32
NPHP3-204ENST00000469232 GNG2P59768 71 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 ACTBP60709 375 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 ACTG1P63261 375 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 IL13RA1P78552 427 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 ASAH1Q13510 395 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 PAN3Q58A45 887 aaKnown RBP6.78□□□□□ -1.32
NPHP3-204ENST00000469232 ZNF841Q6ZN19 808 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 MOB1BQ7L9L4 216 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 MUC20Q8N307 709 aaPredicted RBP6.78□□□□□ -1.32
NPHP3-204ENST00000469232 OR4S1Q8NGB4 309 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 OR5D13Q8NGL4 314 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 PPP1R35Q8TAP8 253 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 NUDCD2Q8WVJ2 157 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 DYRK2Q92630 601 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 CORO2AQ92828 525 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 SNAPC3Q92966 411 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 NINJ1Q92982 152 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 DMRTB1Q96MA1 342 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 CMSS1Q9BQ75 279 aaKnown RBP6.78□□□□□ -1.32
NPHP3-204ENST00000469232 C7orf50Q9BRJ6 194 aaKnown RBP6.78□□□□□ -1.32
NPHP3-204ENST00000469232 Q9N2K0 584 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 BEX4Q9NWD9 120 aaPredicted RBP6.78□□□□□ -1.32
NPHP3-204ENST00000469232 DNAJB11Q9UBS4 358 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 OPN4Q9UHM6 478 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 TBC1D24Q9ULP9 559 aa6.78□□□□□ -1.32
NPHP3-204ENST00000469232 ABCA12Q86UK0 2595 aa6.77□□□□□ -1.33
NPHP3-204ENST00000469232 CEACAM18A8MTB9 384 aa6.77□□□□□ -1.33
NPHP3-204ENST00000469232 SIRPB1O00241 398 aa6.77□□□□□ -1.33
NPHP3-204ENST00000469232 LY6HO94772 140 aa6.77□□□□□ -1.33
NPHP3-204ENST00000469232 ECDO95905 644 aaPredicted RBP6.77□□□□□ -1.33
NPHP3-204ENST00000469232 WNT2P09544 360 aa6.77□□□□□ -1.33
NPHP3-204ENST00000469232 SCN1BQ07699 218 aa6.77□□□□□ -1.33
NPHP3-204ENST00000469232 NKAPLQ5M9Q1 402 aa6.77□□□□□ -1.33
NPHP3-204ENST00000469232 VAX1Q5SQQ9 334 aa6.77□□□□□ -1.33
NPHP3-204ENST00000469232 ATAD3CQ5T2N8 411 aa6.77□□□□□ -1.33
NPHP3-204ENST00000469232 SFRP4Q6FHJ7 346 aaPredicted RBP6.77□□□□□ -1.33
NPHP3-204ENST00000469232 TRAPPC6BQ86SZ2 158 aa6.77□□□□□ -1.33
NPHP3-204ENST00000469232 OR5T2Q8NGG2 359 aa6.77□□□□□ -1.33
NPHP3-204ENST00000469232 C8orf46Q8TAG6 207 aa6.77□□□□□ -1.33
NPHP3-204ENST00000469232 C10orf105Q8TEF2 133 aa6.77□□□□□ -1.33
NPHP3-204ENST00000469232 RAB1CQ92928 201 aa6.77□□□□□ -1.33
NPHP3-204ENST00000469232 TOLLIPQ9H0E2 274 aa6.77□□□□□ -1.33
NPHP3-204ENST00000469232 ETAA1Q9NY74 926 aa6.77□□□□□ -1.33
NPHP3-204ENST00000469232 CTSZQ9UBR2 303 aa6.77□□□□□ -1.33
NPHP3-204ENST00000469232 OR14J1Q9UGF5 321 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms