RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 TAS2R20P59543 309 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 PLA2G7Q13093 441 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 MADCAM1Q13477 382 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 KRBOX4Q5JUW0 171 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 ATPAF1Q5TC12 328 aaPredicted RBP6.77□□□□□ -1.33
HDAC6-216ENST00000468949 METAP1DQ6UB28 335 aaPredicted RBP6.77□□□□□ -1.33
HDAC6-216ENST00000468949 ZNF788Q6ZQV5 615 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 C6orf201Q7Z4U5 140 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 SNX29P2Q8IUI4 249 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 FAM185AQ8N0U4 392 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 BPIFB2Q8N4F0 458 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 OR4M1Q8NGD0 313 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 CLDND2Q8NHS1 167 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 ARHGAP5-AS1Q96IT6 56 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 WDFY2Q96P53 400 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 CMSS1Q9BQ75 279 aaKnown RBP6.77□□□□□ -1.33
HDAC6-216ENST00000468949 PECRQ9BY49 303 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 NXF2Q9GZY0 626 aaKnown RBP6.77□□□□□ -1.33
HDAC6-216ENST00000468949 ZMAT3Q9HA38 289 aaKnown RBP6.77□□□□□ -1.33
HDAC6-216ENST00000468949 SEBOXQ9HB31 216 aaPredicted RBP6.77□□□□□ -1.33
HDAC6-216ENST00000468949 PATZ1Q9HBE1 687 aaKnown RBP6.77□□□□□ -1.33
HDAC6-216ENST00000468949 RAB9BQ9NP90 201 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 C12orf4Q9NQ89 552 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 ZNF222Q9UK12 451 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 TRAPPC2LQ9UL33 140 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 HSF4Q9ULV5 492 aa6.77□□□□□ -1.33
HDAC6-216ENST00000468949 USF3Q68DE3 2245 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 MED13LQ71F56 2210 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 MEIKINA0A087WXM9 373 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 TRGV10A0A0A0MS01 117 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 A0A0A6YYD4 124 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 TRAV24A0A0B4J272 114 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 TMEM235A6NFC5 223 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 K7N7A8 449 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 RAB27BO00194 218 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 PSPNO60542 156 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 CA11O75493 328 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 FOXH1O75593 365 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 CSN2P05814 226 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 SELLP14151 372 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 OR3A1P47881 315 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 INPP1P49441 399 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 P2RX3P56373 397 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 MRPS10P82664 201 aaKnown RBP6.76□□□□□ -1.33
HDAC6-216ENST00000468949 PNLIPRP3Q17RR3 467 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 MOGAT2Q3SYC2 334 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 CDNFQ49AH0 187 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 PYDC2Q56P42 97 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 RNASE12Q5GAN4 147 aaKnown RBP6.76□□□□□ -1.33
HDAC6-216ENST00000468949 CD276Q5ZPR3 534 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 PYHIN1Q6K0P9 492 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 Q6P435 159 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 LYPD2Q6UXB3 125 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 BTNL3Q6UXE8 466 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 MOB1BQ7L9L4 216 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 FAM89BQ8N5H3 189 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 DTX3Q8N9I9 347 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 OR4S1Q8NGB4 309 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 OR6Q1Q8NGQ2 317 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 S100ZQ8WXG8 99 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 C18orf12Q96KH6 178 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 COX4I2Q96KJ9 171 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 FAAP24Q9BTP7 215 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 REG4Q9BYZ8 158 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 WDR12Q9GZL7 423 aaKnown RBP6.76□□□□□ -1.33
HDAC6-216ENST00000468949 RIMS4Q9H426 269 aaPredicted RBP6.76□□□□□ -1.33
HDAC6-216ENST00000468949 KCNIP1Q9NZI2 227 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 OR6C3Q9NZP0 311 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 RCC2Q9P258 522 aaKnown RBP6.76□□□□□ -1.33
HDAC6-216ENST00000468949 MGAT4AQ9UM21 535 aa6.76□□□□□ -1.33
HDAC6-216ENST00000468949 CHD3Q12873 2000 aaKnown RBP6.76□□□□□ -1.33
HDAC6-216ENST00000468949 TRBV23-1A0A0A0MS06 115 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 IGHV4-61A0A0C4DH41 118 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 A0A1B0GW55 424 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 hCG_1809904A0A1W2PP81 198 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 A0A1W2PPE2 198 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 A0A1W2PR64 198 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 A0A1W2PRV1 198 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 hADV38S2A0JD32 116 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 TMEM82A0PJX8 343 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 VWC2LB2RUY7 222 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 F5H0A9 414 aaPredicted RBP6.75□□□□□ -1.33
HDAC6-216ENST00000468949 MFNGO00587 321 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 ENSAO43768 121 aaKnown RBP6.75□□□□□ -1.33
HDAC6-216ENST00000468949 ZNF737O75373 536 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 ECDO95905 644 aaPredicted RBP6.75□□□□□ -1.33
HDAC6-216ENST00000468949 LPLP06858 475 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 DUX4L2P0CJ85 424 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 DUX4L3P0CJ86 424 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 DUX4L4P0CJ87 422 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 DUX4L5P0CJ88 424 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 DUX4L6P0CJ89 424 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 DUX4L7P0CJ90 424 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 LMO1P25800 156 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 TNFSF8P32971 234 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 PRSS3P35030 304 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 CBX5P45973 191 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 ACTBP60709 375 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 RPL31P62899 125 aaKnown RBP6.75□□□□□ -1.33
HDAC6-216ENST00000468949 ACTG1P63261 375 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms