RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 HIST1H1CP16403 213 aaKnown RBP2.43□□□□□ -2.02
XRN1-207ENST00000468894 GNRHRP30968 328 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 CLDN6P56747 220 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 OR4D2P58180 307 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 OR2B8PP59922 312 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 KRTAP12-3P60328 96 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 RHOAP61586 193 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 SEMG2Q02383 582 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 KRR1Q13601 381 aaKnown RBP2.43□□□□□ -2.02
XRN1-207ENST00000468894 TMEM176BQ3YBM2 270 aaPredicted RBP2.43□□□□□ -2.02
XRN1-207ENST00000468894 SPIN3Q5JUX0 258 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 OGFRL1Q5TC84 451 aaPredicted RBP2.43□□□□□ -2.02
XRN1-207ENST00000468894 NIPAL1Q6NVV3 410 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 SPINT4Q6UDR6 99 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 TMEM144Q7Z5S9 345 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 NT5DC3Q86UY8 548 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 CMTM1Q8IZ96 169 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 BLIDQ8IZY5 108 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 LRRC18Q8N456 261 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 CHST4Q8NCG5 386 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 OR6K6Q8NGW6 343 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 OR10X1Q8NGY0 326 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 OR6K3Q8NGY3 331 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 LHFPL5Q8TAF8 219 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 TMEM56Q96MV1 263 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 COL21A1Q96P44 957 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 STACQ99469 402 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 TSNAXQ99598 290 aaKnown RBP2.43□□□□□ -2.02
XRN1-207ENST00000468894 DDA1Q9BW61 102 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 CDCA4Q9BXL8 241 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 SAMD10Q9BYL1 202 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 C11orf49Q9H6J7 331 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 ARMC7Q9H6L4 198 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 TMEM27Q9HBJ8 222 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 EXOSC4Q9NPD3 245 aaKnown RBP2.43□□□□□ -2.02
XRN1-207ENST00000468894 RCL1Q9Y2P8 373 aaKnown RBP2.43□□□□□ -2.02
XRN1-207ENST00000468894 MTCH2Q9Y6C9 303 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 TMEM56-RWDD3S4R434 201 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 ARHGEF10O15013 1369 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 FLT4P35916 1363 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 NID2Q14112 1375 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 DENND4AQ7Z401 1863 aa2.43□□□□□ -2.02
XRN1-207ENST00000468894 C9orf84Q5VXU9 1444 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 NCKAP5O14513 1909 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 A0A0A6YYD5 115 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 IGHV3-72A0A0B4J1Y9 119 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 BTNL10A8MVZ5 291 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 KRBOX1C9JBD0 128 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 SMKR1H3BMG3 65 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 PSMD12O00232 456 aaPredicted RBP2.42□□□□□ -2.02
XRN1-207ENST00000468894 DFFAO00273 331 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 CXCR6O00574 342 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 PLPP1O14494 284 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 GLSO94925 669 aaPredicted RBP2.42□□□□□ -2.02
XRN1-207ENST00000468894 CYB5R3P00387 301 aaPredicted RBP2.42□□□□□ -2.02
XRN1-207ENST00000468894 IFNA21P01568 189 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 HLA-AP01891 365 aaKnown RBP2.42□□□□□ -2.02
XRN1-207ENST00000468894 ARG1P05089 322 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 RHOCP08134 193 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 GZMHP20718 246 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 RPS12P25398 132 aaKnown RBP2.42□□□□□ -2.02
XRN1-207ENST00000468894 ACOT2P49753 483 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 IDH3GP51553 393 aaPredicted RBP2.42□□□□□ -2.02
XRN1-207ENST00000468894 ZNF121P58317 390 aaPredicted RBP2.42□□□□□ -2.02
XRN1-207ENST00000468894 RPL23P62829 140 aaKnown RBP2.42□□□□□ -2.02
XRN1-207ENST00000468894 SP4Q02446 784 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 PRKCDQ05655 676 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 IL15RAQ13261 267 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 APOFQ13790 326 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 TAL2Q16559 108 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 ATP6V1FQ16864 119 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 TRMT5Q32P41 509 aaKnown RBP2.42□□□□□ -2.02
XRN1-207ENST00000468894 OR10J3Q5JRS4 329 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 GUSBP11Q6P575 273 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 DHRS4L2Q6PKH6 230 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 CYHR1Q6ZMK1 362 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 FAM19A1Q7Z5A9 133 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 MRPL52Q86TS9 123 aaKnown RBP2.42□□□□□ -2.02
XRN1-207ENST00000468894 ZNF101Q8IZC7 436 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 OR6V1Q8N148 313 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 OR1M1Q8NGA1 313 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 OR51D1Q8NGF3 324 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 OR1P1Q8NH06 330 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 OR8D1Q8WZ84 308 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 TLCD1Q96CP7 247 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 OR2V2Q96R30 315 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 HBEGFQ99075 208 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 NUDT9Q9BW91 350 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 UGT2B28Q9BY64 529 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 MRPS26Q9BYN8 205 aaKnown RBP2.42□□□□□ -2.02
XRN1-207ENST00000468894 TLNRD1Q9H1K6 362 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 MFSD1Q9H3U5 465 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 DHX35Q9H5Z1 703 aaKnown RBP2.42□□□□□ -2.02
XRN1-207ENST00000468894 RHOFQ9HBH0 211 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 TMBIM4Q9HC24 238 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 C6orf50Q9HD87 102 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 SLC2A9Q9NRM0 540 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.42□□□□□ -2.02
XRN1-207ENST00000468894 FGFR1OP2Q9NVK5 253 aa2.42□□□□□ -2.02
XRN1-207ENST00000468894 VPREB3Q9UKI3 123 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms