RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 NUP37Q8NFH4 326 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 OR51T1Q8NGJ9 327 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 ZNF488Q96MN9 340 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 PECRQ9BY49 303 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 SULT1C2O00338 296 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 LPLP06858 475 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 PRSS3P35030 304 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 GLRXP35754 106 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 SERPINF1P36955 418 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 BSPH1Q075Z2 132 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 ZNF154Q13106 437 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 SCGB2A2Q13296 93 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 ZNF57Q68EA5 555 aaPredicted RBP7□□□□□ -1.29
BRCA1-208ENST00000468300 SLC16A13Q7RTY0 426 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 C1orf174Q8IYL3 243 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 SCCPDHQ8NBX0 429 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 OR10AD1Q8NGE0 317 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 NUDCD2Q8WVJ2 157 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 SNAPC3Q92966 411 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 C5orf30Q96GV9 206 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 CST11Q9H112 138 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 HIPK2Q9H2X6 1198 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 ACACBO00763 2458 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 PCNX1Q96RV3 2341 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 CBY3A6NI87 242 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 OR5B21A6NL26 309 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 SHISA9B4DS77 424 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 I3L521 148 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 ITGB1BP1O14713 200 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 CHATP28329 748 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 NPY4RP50391 375 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 CCR6P51684 374 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 RBM11P57052 281 aaKnown RBP7□□□□□ -1.29
BRCA1-208ENST00000468300 GNG3P63215 75 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 PDCD1Q15116 288 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 RSU1Q15404 277 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 PNLIPRP3Q17RR3 467 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 NHLRC3Q5JS37 347 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 C6orf201Q7Z4U5 140 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 LHFPL4Q7Z7J7 247 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 FBXL14Q8N1E6 418 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 OSR2Q8N2R0 312 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 FTMTQ8N4E7 242 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 OR56B1Q8NGI3 324 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 C15orf40Q8WUR7 153 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 MRGPRFQ96AM1 343 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 RAB3CQ96E17 227 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 MEGF10Q96KG7 1140 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 ADAT1Q9BUB4 502 aaKnown RBP7□□□□□ -1.29
BRCA1-208ENST00000468300 TPPP3Q9BW30 176 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 MSL2Q9HCI7 577 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 NLKQ9UBE8 527 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 RP1L1Q8IWN7 2480 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-208ENST00000468300 F5H5P2 479 aa6.99□□□□□ -1.29
BRCA1-208ENST00000468300 CD74P04233 296 aa6.99□□□□□ -1.29
BRCA1-208ENST00000468300 GTF2F2P13984 249 aa6.99□□□□□ -1.29
BRCA1-208ENST00000468300 GNLYP22749 145 aa6.99□□□□□ -1.29
BRCA1-208ENST00000468300 TAF9Q16594 264 aa6.99□□□□□ -1.29
BRCA1-208ENST00000468300 ZNF718Q3SXZ3 478 aa6.99□□□□□ -1.29
BRCA1-208ENST00000468300 HAGHLQ6PII5 290 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-208ENST00000468300 RNF125Q96EQ8 232 aa6.99□□□□□ -1.29
BRCA1-208ENST00000468300 CPNE2Q96FN4 548 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-208ENST00000468300 MARVELD1Q9BSK0 173 aa6.99□□□□□ -1.29
BRCA1-208ENST00000468300 PKIBQ9C010 78 aa6.99□□□□□ -1.29
BRCA1-208ENST00000468300 HES4Q9HCC6 221 aa6.99□□□□□ -1.29
BRCA1-208ENST00000468300 LRP5LA4QPB2 252 aa6.99□□□□□ -1.29
BRCA1-208ENST00000468300 FAM90A27PA6NNH2 459 aa6.99□□□□□ -1.29
BRCA1-208ENST00000468300 CRYAAP02489 173 aa6.99□□□□□ -1.29
BRCA1-208ENST00000468300 CD3DP04234 171 aa6.99□□□□□ -1.29
BRCA1-208ENST00000468300 DTYMKP23919 212 aa6.99□□□□□ -1.29
BRCA1-208ENST00000468300 FGF12P61328 243 aa6.99□□□□□ -1.29
BRCA1-208ENST00000468300 SSBP1Q04837 148 aaKnown RBP6.99□□□□□ -1.29
BRCA1-208ENST00000468300 MPPED2Q15777 294 aa6.99□□□□□ -1.29
BRCA1-208ENST00000468300 RGS7BPQ6MZT1 257 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-208ENST00000468300 WFDC8Q8IUA0 241 aa6.99□□□□□ -1.29
BRCA1-208ENST00000468300 OR4S1Q8NGB4 309 aa6.99□□□□□ -1.29
BRCA1-208ENST00000468300 SULT4A1Q9BR01 284 aa6.99□□□□□ -1.29
BRCA1-208ENST00000468300 OCSTAMPQ9BR26 566 aa6.99□□□□□ -1.29
BRCA1-208ENST00000468300 TMEM100Q9NV29 134 aa6.99□□□□□ -1.29
BRCA1-208ENST00000468300 ST3GAL6Q9Y274 331 aa6.99□□□□□ -1.29
BRCA1-208ENST00000468300 IGKV1D-8A0A087WSZ0 117 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 IGHV3-64DA0A0J9YX35 117 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 A0A1B0GW15 77 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 ZNF780AO75290 641 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-208ENST00000468300 GABRR1P24046 479 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 GIFP27352 417 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 BLVRBP30043 206 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-208ENST00000468300 NCMAPQ5T1S8 102 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 RSBN1Q5VWQ0 802 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-208ENST00000468300 OR52W1Q6IF63 320 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 TRAPPC6BQ86SZ2 158 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 OR4C16Q8NGL9 310 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 DYRK2Q92630 601 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 RNASE6Q93091 150 aaKnown RBP6.98□□□□□ -1.29
BRCA1-208ENST00000468300 MRPS24Q96EL2 167 aaKnown RBP6.98□□□□□ -1.29
BRCA1-208ENST00000468300 DIRC2Q96SL1 478 aa6.98□□□□□ -1.29
BRCA1-208ENST00000468300 HDHD3Q9BSH5 251 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-208ENST00000468300 URM1Q9BTM9 101 aaKnown RBP6.98□□□□□ -1.29
BRCA1-208ENST00000468300 NPDC1Q9NQX5 325 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-208ENST00000468300 RCC2Q9P258 522 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms