RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 MSMO1Q15800 293 aa8.63□□□□□ -1.03
MSH5-213ENST00000468136 ALKBH6Q3KRA9 238 aa8.63□□□□□ -1.03
MSH5-213ENST00000468136 C6orf183Q5T699 404 aa8.63□□□□□ -1.03
MSH5-213ENST00000468136 SLC35E4Q6ICL7 350 aa8.63□□□□□ -1.03
MSH5-213ENST00000468136 WDR82Q6UXN9 313 aa8.63□□□□□ -1.03
MSH5-213ENST00000468136 ACP7Q6ZNF0 438 aa8.63□□□□□ -1.03
MSH5-213ENST00000468136 ZNF497Q6ZNH5 498 aa8.63□□□□□ -1.03
MSH5-213ENST00000468136 C9orf62Q8N4C0 152 aa8.63□□□□□ -1.03
MSH5-213ENST00000468136 LRTM2Q8N967 370 aa8.63□□□□□ -1.03
MSH5-213ENST00000468136 MRPL30Q8TCC3 161 aaKnown RBP8.63□□□□□ -1.03
MSH5-213ENST00000468136 RNASE6Q93091 150 aaKnown RBP8.63□□□□□ -1.03
MSH5-213ENST00000468136 KIRREL1Q96J84 757 aa8.63□□□□□ -1.03
MSH5-213ENST00000468136 TMEM246Q9BRR3 403 aa8.63□□□□□ -1.03
MSH5-213ENST00000468136 HDHD3Q9BSH5 251 aaPredicted RBP8.63□□□□□ -1.03
MSH5-213ENST00000468136 PDCD10Q9BUL8 212 aa8.63□□□□□ -1.03
MSH5-213ENST00000468136 RSRP1Q9BUV0 290 aa8.63□□□□□ -1.03
MSH5-213ENST00000468136 ESRP2Q9H6T0 727 aaKnown RBP8.63□□□□□ -1.03
MSH5-213ENST00000468136 TMEM165Q9HC07 324 aa8.63□□□□□ -1.03
MSH5-213ENST00000468136 MBNL3Q9NUK0 354 aaKnown RBP8.63□□□□□ -1.03
MSH5-213ENST00000468136 KCNIP1Q9NZI2 227 aa8.63□□□□□ -1.03
MSH5-213ENST00000468136 DUSP13Q9UII6 198 aa8.63□□□□□ -1.03
MSH5-213ENST00000468136 CFAP54Q96N23 3096 aa8.63□□□□□ -1.03
MSH5-213ENST00000468136 IGKV1D-8A0A087WSZ0 117 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 TEX13DA0A0J9YY54 714 aaPredicted RBP8.62□□□□□ -1.03
MSH5-213ENST00000468136 DUXBA0A1W2PPF3 345 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 F8VVB4 439 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 F8VWA3 439 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 ERVH48-1M5A8F1 160 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 TUSC2O75896 110 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 PPYP01298 95 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 CD55P08174 381 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 TNFRSF1AP19438 455 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 CCKARP32238 428 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 ZNF81P51508 661 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 CLEC18BQ6UXF7 455 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 Q6ZR03 302 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 RTN4RL2Q86UN3 420 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 C11orf53Q8IXP5 236 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 CMTM1Q8IZ96 169 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 ZNF565Q8N9K5 539 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 KDF1Q8NAX2 398 aaPredicted RBP8.62□□□□□ -1.03
MSH5-213ENST00000468136 ADAD2Q8NCV1 583 aaKnown RBP8.62□□□□□ -1.03
MSH5-213ENST00000468136 OR2Z1Q8NG97 314 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 OR11L1Q8NGX0 322 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 Q8TCH9 128 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 MAFIPQ8WZ33 124 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 TMEM230Q96A57 120 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 ELMOD3Q96FG2 381 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 AKR1E2Q96JD6 320 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 MEGF10Q96KG7 1140 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 CHIAQ9BZP6 476 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 NAA60Q9H7X0 242 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 CA10Q9NS85 328 aa8.62□□□□□ -1.03
MSH5-213ENST00000468136 TRBV6-7A0A0A0MS04 114 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 A0A0D9SG52 128 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 hCG_1807616A0A1W2PRN6 198 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 OOEPA6NGQ2 149 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 ATP6V1G2-DDX39BF2Z307 99 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 H0YL77 283 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 M0R233 179 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 GPR31O00270 319 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 HS3ST1O14792 307 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 RPS2P15880 293 aaKnown RBP8.61□□□□□ -1.03
MSH5-213ENST00000468136 RPA2P15927 270 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 H2BFSP57053 126 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 PIGPP57054 158 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 ZNF345Q14585 488 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 TESK1Q15569 626 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 TMEM30BQ3MIR4 351 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 LY6G6FQ5SQ64 297 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 ZGRF1Q86YA3 2104 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 LGI3Q8N145 548 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 ZBTB34Q8NCN2 500 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 OR5T2Q8NGG2 359 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 OR5D13Q8NGL4 314 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 OR10J5Q8NHC4 309 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 LILRB4Q8NHJ6 448 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 THAP6Q8TBB0 222 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 CASTOR1Q8WTX7 329 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 RTN4IP1Q8WWV3 396 aaPredicted RBP8.61□□□□□ -1.03
MSH5-213ENST00000468136 RDH5Q92781 318 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 SNX22Q96L94 193 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 EGLN1Q9GZT9 426 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 TOLLIPQ9H0E2 274 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 MSL2Q9HCI7 577 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 TRAPPC2LQ9UL33 140 aa8.61□□□□□ -1.03
MSH5-213ENST00000468136 MAP1BP46821 2468 aaKnown RBP8.61□□□□□ -1.03
MSH5-213ENST00000468136 DMXL1Q9Y485 3027 aa8.6□□□□□ -1.03
MSH5-213ENST00000468136 TUBAL3A6NHL2 446 aa8.6□□□□□ -1.03
MSH5-213ENST00000468136 LRRC30A6NM36 301 aa8.6□□□□□ -1.03
MSH5-213ENST00000468136 L7N2F9 121 aa8.6□□□□□ -1.03
MSH5-213ENST00000468136 OR2F2O95006 317 aa8.6□□□□□ -1.03
MSH5-213ENST00000468136 IFNA7P01567 189 aa8.6□□□□□ -1.03
MSH5-213ENST00000468136 IRF2P14316 349 aa8.6□□□□□ -1.03
MSH5-213ENST00000468136 SUPT4H1P63272 117 aaKnown RBP8.6□□□□□ -1.03
MSH5-213ENST00000468136 OR2F1Q13607 317 aa8.6□□□□□ -1.03
MSH5-213ENST00000468136 HMGN3Q15651 99 aa8.6□□□□□ -1.03
MSH5-213ENST00000468136 PRR30Q53SZ7 412 aaPredicted RBP8.6□□□□□ -1.03
MSH5-213ENST00000468136 LAMTOR1Q6IAA8 161 aa8.6□□□□□ -1.03
MSH5-213ENST00000468136 BRICD5Q6PL45 260 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms