RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 BIVMQ86UB2 503 aa12.59□□□□□ -0.39
SNIP1-202ENST00000468040 FGFRL1Q8N441 504 aa12.59□□□□□ -0.39
SNIP1-202ENST00000468040 MCFD2Q8NI22 146 aa12.59□□□□□ -0.39
SNIP1-202ENST00000468040 C8orf46Q8TAG6 207 aa12.59□□□□□ -0.39
SNIP1-202ENST00000468040 MSI2Q96DH6 328 aaKnown RBP12.59□□□□□ -0.39
SNIP1-202ENST00000468040 S100A16Q96FQ6 103 aaKnown RBP12.59□□□□□ -0.39
SNIP1-202ENST00000468040 DMRTB1Q96MA1 342 aa12.59□□□□□ -0.39
SNIP1-202ENST00000468040 A3GALT2U3KPV4 340 aa12.59□□□□□ -0.39
SNIP1-202ENST00000468040 A0A1W2PPH5 198 aa12.58□□□□□ -0.4
SNIP1-202ENST00000468040 hADV38S2A0JD32 116 aa12.58□□□□□ -0.4
SNIP1-202ENST00000468040 TMEM30CPA0ZSE6 113 aa12.58□□□□□ -0.4
SNIP1-202ENST00000468040 C22orf46C9J442 243 aa12.58□□□□□ -0.4
SNIP1-202ENST00000468040 RGS5O15539 181 aa12.58□□□□□ -0.4
SNIP1-202ENST00000468040 HPGDSO60760 199 aa12.58□□□□□ -0.4
SNIP1-202ENST00000468040 LIPFP07098 398 aa12.58□□□□□ -0.4
SNIP1-202ENST00000468040 GATA3P23771 443 aa12.58□□□□□ -0.4
SNIP1-202ENST00000468040 DVL1P1P54792 670 aaPredicted RBP12.58□□□□□ -0.4
SNIP1-202ENST00000468040 TMEM50BP56557 158 aa12.58□□□□□ -0.4
SNIP1-202ENST00000468040 AESQ08117 197 aa12.58□□□□□ -0.4
SNIP1-202ENST00000468040 MOGAT2Q3SYC2 334 aa12.58□□□□□ -0.4
SNIP1-202ENST00000468040 PLAC9Q5JTB6 97 aa12.58□□□□□ -0.4
SNIP1-202ENST00000468040 SLC35E4Q6ICL7 350 aa12.58□□□□□ -0.4
SNIP1-202ENST00000468040 BTNL3Q6UXE8 466 aa12.58□□□□□ -0.4
SNIP1-202ENST00000468040 GLCCI1Q86VQ1 547 aa12.58□□□□□ -0.4
SNIP1-202ENST00000468040 CMTM4Q8IZR5 234 aa12.58□□□□□ -0.4
SNIP1-202ENST00000468040 TMEM186Q96B77 213 aa12.58□□□□□ -0.4
SNIP1-202ENST00000468040 COQ2Q96H96 371 aa12.58□□□□□ -0.4
SNIP1-202ENST00000468040 ARHGAP5-AS1Q96IT6 56 aa12.58□□□□□ -0.4
SNIP1-202ENST00000468040 SULT4A1Q9BR01 284 aa12.58□□□□□ -0.4
SNIP1-202ENST00000468040 FAAP24Q9BTP7 215 aa12.58□□□□□ -0.4
SNIP1-202ENST00000468040 TMUB1Q9BVT8 246 aa12.58□□□□□ -0.4
SNIP1-202ENST00000468040 C6orf62Q9GZU0 229 aaPredicted RBP12.58□□□□□ -0.4
SNIP1-202ENST00000468040 NXF2Q9GZY0 626 aaKnown RBP12.58□□□□□ -0.4
SNIP1-202ENST00000468040 NCOR1P1Q9H4R4 102 aa12.58□□□□□ -0.4
SNIP1-202ENST00000468040 C19orf12Q9NSK7 152 aa12.58□□□□□ -0.4
SNIP1-202ENST00000468040 ETAA1Q9NY74 926 aa12.58□□□□□ -0.4
SNIP1-202ENST00000468040 ADAM30Q9UKF2 790 aa12.58□□□□□ -0.4
SNIP1-202ENST00000468040 ITPR3Q14573 2671 aa12.57□□□□□ -0.4
SNIP1-202ENST00000468040 IGHV2-70DA0A0C4DH43 119 aa12.57□□□□□ -0.4
SNIP1-202ENST00000468040 A0A0G2JMP0 313 aa12.57□□□□□ -0.4
SNIP1-202ENST00000468040 A0A0X1KG70 313 aa12.57□□□□□ -0.4
SNIP1-202ENST00000468040 A0A1W2PQ09 198 aa12.57□□□□□ -0.4
SNIP1-202ENST00000468040 ODAMA1E959 279 aa12.57□□□□□ -0.4
SNIP1-202ENST00000468040 UBE2QL1A1L167 161 aa12.57□□□□□ -0.4
SNIP1-202ENST00000468040 SERPINE3A8MV23 424 aa12.57□□□□□ -0.4
SNIP1-202ENST00000468040 MFNGO00587 321 aa12.57□□□□□ -0.4
SNIP1-202ENST00000468040 TGFAP01135 160 aa12.57□□□□□ -0.4
SNIP1-202ENST00000468040 HIST1H1DP16402 221 aaKnown RBP12.57□□□□□ -0.4
SNIP1-202ENST00000468040 RSBN1Q5VWQ0 802 aaPredicted RBP12.57□□□□□ -0.4
SNIP1-202ENST00000468040 FAM185AQ8N0U4 392 aa12.57□□□□□ -0.4
SNIP1-202ENST00000468040 LY6G5BQ8NDX9 201 aa12.57□□□□□ -0.4
SNIP1-202ENST00000468040 OR4M2Q8NGB6 313 aa12.57□□□□□ -0.4
SNIP1-202ENST00000468040 OR4M1Q8NGD0 313 aa12.57□□□□□ -0.4
SNIP1-202ENST00000468040 DACT3Q96B18 629 aaPredicted RBP12.57□□□□□ -0.4
SNIP1-202ENST00000468040 PECRQ9BY49 303 aa12.57□□□□□ -0.4
SNIP1-202ENST00000468040 MMP27Q9H306 513 aa12.57□□□□□ -0.4
SNIP1-202ENST00000468040 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.57□□□□□ -0.4
SNIP1-202ENST00000468040 OR6C3Q9NZP0 311 aa12.57□□□□□ -0.4
SNIP1-202ENST00000468040 MALRD1Q5VYJ5 2156 aa12.57□□□□□ -0.4
SNIP1-202ENST00000468040 OTOGQ6ZRI0 2925 aa12.57□□□□□ -0.4
SNIP1-202ENST00000468040 CREBBPQ92793 2442 aa12.57□□□□□ -0.4
SNIP1-202ENST00000468040 MEIKINA0A087WXM9 373 aa12.56□□□□□ -0.4
SNIP1-202ENST00000468040 TRGV10A0A0A0MS01 117 aa12.56□□□□□ -0.4
SNIP1-202ENST00000468040 KIR2DS1A0A191URI9 304 aa12.56□□□□□ -0.4
SNIP1-202ENST00000468040 FAM25AB3EWG3 89 aa12.56□□□□□ -0.4
SNIP1-202ENST00000468040 FAM25CB3EWG5 89 aa12.56□□□□□ -0.4
SNIP1-202ENST00000468040 FAM25GB3EWG6 89 aa12.56□□□□□ -0.4
SNIP1-202ENST00000468040 XRCC3O43542 346 aa12.56□□□□□ -0.4
SNIP1-202ENST00000468040 EIF4EP06730 217 aaKnown RBP12.56□□□□□ -0.4
SNIP1-202ENST00000468040 GSTP1P09211 210 aaKnown RBP12.56□□□□□ -0.4
SNIP1-202ENST00000468040 PPIAL4GP0DN37 164 aa12.56□□□□□ -0.4
SNIP1-202ENST00000468040 GNB3P16520 340 aa12.56□□□□□ -0.4
SNIP1-202ENST00000468040 ZNF16P17020 682 aaPredicted RBP12.56□□□□□ -0.4
SNIP1-202ENST00000468040 CDK2P24941 298 aa12.56□□□□□ -0.4
SNIP1-202ENST00000468040 TALDO1P37837 337 aa12.56□□□□□ -0.4
SNIP1-202ENST00000468040 GLIPR1P48060 266 aa12.56□□□□□ -0.4
SNIP1-202ENST00000468040 MRPS15P82914 257 aaKnown RBP12.56□□□□□ -0.4
SNIP1-202ENST00000468040 PAX2Q02962 417 aa12.56□□□□□ -0.4
SNIP1-202ENST00000468040 TMEM69Q5SWH9 247 aa12.56□□□□□ -0.4
SNIP1-202ENST00000468040 DCAF12L2Q5VW00 463 aa12.56□□□□□ -0.4
SNIP1-202ENST00000468040 ZNF497Q6ZNH5 498 aa12.56□□□□□ -0.4
SNIP1-202ENST00000468040 TPRX1Q8N7U7 411 aa12.56□□□□□ -0.4
SNIP1-202ENST00000468040 PLPPR1Q8TBJ4 325 aa12.56□□□□□ -0.4
SNIP1-202ENST00000468040 RIMS4Q9H426 269 aaPredicted RBP12.56□□□□□ -0.4
SNIP1-202ENST00000468040 HIF1ANQ9NWT6 349 aa12.56□□□□□ -0.4
SNIP1-202ENST00000468040 ING3Q9NXR8 418 aa12.56□□□□□ -0.4
SNIP1-202ENST00000468040 KIF25Q9UIL4 384 aa12.56□□□□□ -0.4
SNIP1-202ENST00000468040 UBE2J1Q9Y385 318 aaPredicted RBP12.56□□□□□ -0.4
SNIP1-202ENST00000468040 INSIG2Q9Y5U4 225 aa12.56□□□□□ -0.4
SNIP1-202ENST00000468040 LINC00312Q9Y6C7 94 aa12.56□□□□□ -0.4
SNIP1-202ENST00000468040 YLPM1P49750 1951 aaKnown RBP12.56□□□□□ -0.4
SNIP1-202ENST00000468040 DOCK11Q5JSL3 2073 aa12.55□□□□□ -0.4
SNIP1-202ENST00000468040 TRAV18A0A075B6X5 111 aa12.55□□□□□ -0.4
SNIP1-202ENST00000468040 POM121CA8CG34 1229 aa12.55□□□□□ -0.4
SNIP1-202ENST00000468040 CTDSP2O14595 271 aa12.55□□□□□ -0.4
SNIP1-202ENST00000468040 CD5LO43866 347 aa12.55□□□□□ -0.4
SNIP1-202ENST00000468040 MT-ND4P03905 459 aa12.55□□□□□ -0.4
SNIP1-202ENST00000468040 ELK1P19419 428 aa12.55□□□□□ -0.4
SNIP1-202ENST00000468040 TMEM200BQ69YZ2 307 aa12.55□□□□□ -0.4
SNIP1-202ENST00000468040 TRAPPC6BQ86SZ2 158 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms