RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 FOXC2Q99958 501 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 SLC25A21Q9BQT8 299 aaPredicted RBP12.38□□□□□ -0.43
DDX56-208ENST00000467318 GINS4Q9BRT9 223 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 ELL3Q9HB65 397 aaPredicted RBP12.38□□□□□ -0.43
DDX56-208ENST00000467318 UBQLN2Q9UHD9 624 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 PPIAL4AQ9Y536 164 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 NOTCH2Q04721 2471 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 TRAV38-1A0A0B4J264 116 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 IGKV1-12A0A0C4DH73 117 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 METTL21EPA6NDL7 271 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 NXPH2O95156 264 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 IGKV1D-12P01611 117 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 CSTBP04080 98 aaKnown RBP12.38□□□□□ -0.43
DDX56-208ENST00000467318 LPLP06858 475 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 MUC1P15941 1255 aaPredicted RBP12.38□□□□□ -0.43
DDX56-208ENST00000467318 MICBQ29980 383 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 SMIM21Q3B7S5 101 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 ELP2Q6IA86 826 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 SLC36A1Q7Z2H8 476 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 FAM90A1Q86YD7 464 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 Q8NFD4 153 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 OR4C16Q8NGL9 310 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 NKX3-1Q99801 234 aaPredicted RBP12.38□□□□□ -0.43
DDX56-208ENST00000467318 HES4Q9HCC6 221 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 DCAF16Q9NXF7 216 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 RAB22AQ9UL26 194 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 PPIHO43447 177 aaKnown RBP12.37□□□□□ -0.43
DDX56-208ENST00000467318 BPNT1O95861 308 aa12.37□□□□□ -0.43
DDX56-208ENST00000467318 SFTPBP07988 381 aa12.37□□□□□ -0.43
DDX56-208ENST00000467318 BCL3P20749 454 aa12.37□□□□□ -0.43
DDX56-208ENST00000467318 GPR6P46095 362 aaPredicted RBP12.37□□□□□ -0.43
DDX56-208ENST00000467318 NPBWR2P48146 333 aa12.37□□□□□ -0.43
DDX56-208ENST00000467318 TSPAN5P62079 268 aa12.37□□□□□ -0.43
DDX56-208ENST00000467318 CLEC12BQ2HXU8 276 aa12.37□□□□□ -0.43
DDX56-208ENST00000467318 SHEQ5VZ18 495 aa12.37□□□□□ -0.43
DDX56-208ENST00000467318 TEX36Q5VZQ5 186 aa12.37□□□□□ -0.43
DDX56-208ENST00000467318 STEAP1BQ6NZ63 245 aa12.37□□□□□ -0.43
DDX56-208ENST00000467318 FIP1L1Q6UN15 594 aaKnown RBP12.37□□□□□ -0.43
DDX56-208ENST00000467318 C10orf105Q8TEF2 133 aa12.37□□□□□ -0.43
DDX56-208ENST00000467318 MRPS24Q96EL2 167 aaKnown RBP12.37□□□□□ -0.43
DDX56-208ENST00000467318 SEC22CQ9BRL7 303 aa12.37□□□□□ -0.43
DDX56-208ENST00000467318 CST11Q9H112 138 aa12.37□□□□□ -0.43
DDX56-208ENST00000467318 HEXA-AS1Q9H8Q6 139 aa12.37□□□□□ -0.43
DDX56-208ENST00000467318 DNAJB11Q9UBS4 358 aa12.37□□□□□ -0.43
DDX56-208ENST00000467318 MAB21L2Q9Y586 359 aa12.37□□□□□ -0.43
DDX56-208ENST00000467318 OOEPA6NGQ2 149 aa12.36□□□□□ -0.43
DDX56-208ENST00000467318 HMSDA8MTL9 139 aa12.36□□□□□ -0.43
DDX56-208ENST00000467318 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.36□□□□□ -0.43
DDX56-208ENST00000467318 LGALS8O00214 317 aa12.36□□□□□ -0.43
DDX56-208ENST00000467318 MDH2P40926 338 aaKnown RBP12.36□□□□□ -0.43
DDX56-208ENST00000467318 EFNB2P52799 333 aa12.36□□□□□ -0.43
DDX56-208ENST00000467318 HOXA4Q00056 320 aaPredicted RBP12.36□□□□□ -0.43
DDX56-208ENST00000467318 FAM189A2Q15884 450 aa12.36□□□□□ -0.43
DDX56-208ENST00000467318 SLC22A6Q4U2R8 563 aa12.36□□□□□ -0.43
DDX56-208ENST00000467318 CLLU1Q5K131 121 aa12.36□□□□□ -0.43
DDX56-208ENST00000467318 ACP7Q6ZNF0 438 aa12.36□□□□□ -0.43
DDX56-208ENST00000467318 OR8H3Q8N146 312 aa12.36□□□□□ -0.43
DDX56-208ENST00000467318 FAM58AQ8N1B3 248 aa12.36□□□□□ -0.43
DDX56-208ENST00000467318 MUC20Q8N307 709 aaPredicted RBP12.36□□□□□ -0.43
DDX56-208ENST00000467318 BOLLQ8N9W6 283 aaKnown RBP12.36□□□□□ -0.43
DDX56-208ENST00000467318 KCNG3Q8TAE7 436 aa12.36□□□□□ -0.43
DDX56-208ENST00000467318 EMG1Q92979 244 aaKnown RBP12.36□□□□□ -0.43
DDX56-208ENST00000467318 C1orf147Q96MC9 270 aaPredicted RBP12.36□□□□□ -0.43
DDX56-208ENST00000467318 ZNF488Q96MN9 340 aa12.36□□□□□ -0.43
DDX56-208ENST00000467318 PIMREGQ9BSJ6 248 aa12.36□□□□□ -0.43
DDX56-208ENST00000467318 DPCDQ9BVM2 203 aaPredicted RBP12.36□□□□□ -0.43
DDX56-208ENST00000467318 WDR13Q9H1Z4 485 aa12.36□□□□□ -0.43
DDX56-208ENST00000467318 WIPI2Q9Y4P8 454 aa12.36□□□□□ -0.43
DDX56-208ENST00000467318 C3orf80F5H4A9 247 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 F8VVB4 439 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 F8VWA3 439 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 WNT9BO14905 357 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 LDLRAD4O15165 306 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 NDUFA2O43678 99 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 HTR3BO95264 441 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 PTHLHP12272 177 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 EGR1P18146 543 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 ANXA7P20073 488 aaKnown RBP12.35□□□□□ -0.43
DDX56-208ENST00000467318 NFYAP23511 347 aaPredicted RBP12.35□□□□□ -0.43
DDX56-208ENST00000467318 GMFBP60983 142 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 FGF12P61328 243 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 FAM201AQ5SY85 155 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 CITED4Q96RK1 184 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 NUDT16L1Q9BRJ7 211 aaKnown RBP12.35□□□□□ -0.43
DDX56-208ENST00000467318 AUP1Q9Y679 476 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 DISC1C4P0D8 188 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 L7N2F9 121 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 ZNF205O95201 554 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 KNG1P01042 644 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 IGHV2-70P01814 119 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 RLN1P04808 185 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 SERPINA2P20848 420 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 PLA2G7Q13093 441 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 MEF2DQ14814 521 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 OPCMLQ14982 345 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 ZNF146Q15072 292 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 ZMYND11Q15326 602 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 TMEM155Q4W5P6 130 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 SPIN3Q5JUX0 258 aa12.35□□□□□ -0.43
DDX56-208ENST00000467318 Q5PR19 223 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms