RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 RPL23AP62750 156 aaKnown RBP15.68■□□□□ 0.1
SNAPC3-205ENST00000467062 VAMP2P63027 116 aa15.68■□□□□ 0.1
SNAPC3-205ENST00000467062 OR5L2Q8NGL0 311 aa15.68■□□□□ 0.1
SNAPC3-205ENST00000467062 RASL10BQ96S79 203 aa15.68■□□□□ 0.1
SNAPC3-205ENST00000467062 DEFB126Q9BYW3 111 aa15.68■□□□□ 0.1
SNAPC3-205ENST00000467062 DNAJC4Q9NNZ3 241 aa15.68■□□□□ 0.1
SNAPC3-205ENST00000467062 LHFPL6Q9Y693 200 aa15.68■□□□□ 0.1
SNAPC3-205ENST00000467062 NSG1A0A0A6YYJ2 146 aa15.67■□□□□ 0.1
SNAPC3-205ENST00000467062 IGHV3-15A0A0B4J1V0 119 aa15.67■□□□□ 0.1
SNAPC3-205ENST00000467062 ZFAND5O76080 213 aa15.67■□□□□ 0.1
SNAPC3-205ENST00000467062 SOX8P57073 446 aa15.67■□□□□ 0.1
SNAPC3-205ENST00000467062 TAS2R46P59540 309 aa15.67■□□□□ 0.1
SNAPC3-205ENST00000467062 HLA-BQ31612 363 aa15.67■□□□□ 0.1
SNAPC3-205ENST00000467062 KLHL24Q6TFL4 600 aa15.67■□□□□ 0.1
SNAPC3-205ENST00000467062 UEVLDQ8IX04 471 aa15.67■□□□□ 0.1
SNAPC3-205ENST00000467062 ZFP62Q8NB50 900 aaPredicted RBP15.67■□□□□ 0.1
SNAPC3-205ENST00000467062 ADPRHL1Q8NDY3 354 aa15.67■□□□□ 0.1
SNAPC3-205ENST00000467062 MRPL24Q96A35 216 aaKnown RBP15.67■□□□□ 0.1
SNAPC3-205ENST00000467062 NICN1Q9BSH3 213 aa15.67■□□□□ 0.1
SNAPC3-205ENST00000467062 MRPL13Q9BYD1 178 aaKnown RBP15.67■□□□□ 0.1
SNAPC3-205ENST00000467062 ALKBH4Q9NXW9 302 aa15.67■□□□□ 0.1
SNAPC3-205ENST00000467062 NAGKQ9UJ70 344 aa15.67■□□□□ 0.1
SNAPC3-205ENST00000467062 RCL1Q9Y2P8 373 aaKnown RBP15.67■□□□□ 0.1
SNAPC3-205ENST00000467062 SIT1Q9Y3P8 196 aa15.67■□□□□ 0.1
SNAPC3-205ENST00000467062 A0A1W2PP11 408 aa15.67■□□□□ 0.1
SNAPC3-205ENST00000467062 HPRT1P00492 218 aa15.67■□□□□ 0.1
SNAPC3-205ENST00000467062 ISG15P05161 165 aa15.67■□□□□ 0.1
SNAPC3-205ENST00000467062 ZNF266Q14584 549 aa15.67■□□□□ 0.1
SNAPC3-205ENST00000467062 IL13RA2Q14627 380 aa15.67■□□□□ 0.1
SNAPC3-205ENST00000467062 RIPPLY2Q5TAB7 128 aa15.67■□□□□ 0.1
SNAPC3-205ENST00000467062 ZNF66Q6ZN08 573 aa15.67■□□□□ 0.1
SNAPC3-205ENST00000467062 FAM71F1Q96KD3 344 aaPredicted RBP15.67■□□□□ 0.1
SNAPC3-205ENST00000467062 P4HTMQ9NXG6 502 aa15.67■□□□□ 0.1
SNAPC3-205ENST00000467062 HBE1P02100 147 aa15.66■□□□□ 0.1
SNAPC3-205ENST00000467062 COL5A1-AS1Q5SY13 56 aa15.66■□□□□ 0.1
SNAPC3-205ENST00000467062 LYSMD4Q5XG99 296 aa15.66■□□□□ 0.1
SNAPC3-205ENST00000467062 ZNF880Q6PDB4 577 aa15.66■□□□□ 0.1
SNAPC3-205ENST00000467062 EHFQ9NZC4 300 aa15.66■□□□□ 0.1
SNAPC3-205ENST00000467062 YLPM1P49750 1951 aaKnown RBP15.66■□□□□ 0.1
SNAPC3-205ENST00000467062 PATE3B3GLJ2 98 aa15.66■□□□□ 0.1
SNAPC3-205ENST00000467062 E9PLN8 166 aa15.66■□□□□ 0.1
SNAPC3-205ENST00000467062 HIST1H1DP16402 221 aaKnown RBP15.66■□□□□ 0.1
SNAPC3-205ENST00000467062 SELEP16581 610 aa15.66■□□□□ 0.1
SNAPC3-205ENST00000467062 ECI1P42126 302 aa15.66■□□□□ 0.1
SNAPC3-205ENST00000467062 ABHD12BQ7Z5M8 362 aaPredicted RBP15.66■□□□□ 0.1
SNAPC3-205ENST00000467062 TGIF2LYQ8IUE0 185 aa15.66■□□□□ 0.1
SNAPC3-205ENST00000467062 ASPMQ8IZT6 3477 aa15.66■□□□□ 0.1
SNAPC3-205ENST00000467062 CLDND2Q8NHS1 167 aa15.66■□□□□ 0.1
SNAPC3-205ENST00000467062 RNASE8Q8TDE3 154 aaKnown RBP15.66■□□□□ 0.1
SNAPC3-205ENST00000467062 SAP25Q8TEE9 199 aa15.66■□□□□ 0.1
SNAPC3-205ENST00000467062 MIEN1Q9BRT3 115 aa15.66■□□□□ 0.1
SNAPC3-205ENST00000467062 OR2J1Q9GZK6 312 aa15.66■□□□□ 0.1
SNAPC3-205ENST00000467062 TMEM14DPA8MWL7 114 aa15.65■□□□□ 0.1
SNAPC3-205ENST00000467062 CFIP05156 583 aa15.65■□□□□ 0.1
SNAPC3-205ENST00000467062 HNF1AP20823 631 aa15.65■□□□□ 0.1
SNAPC3-205ENST00000467062 ELLP55199 621 aaPredicted RBP15.65■□□□□ 0.1
SNAPC3-205ENST00000467062 P2RY6Q15077 328 aa15.65■□□□□ 0.1
SNAPC3-205ENST00000467062 LEMD1Q68G75 181 aa15.65■□□□□ 0.1
SNAPC3-205ENST00000467062 ARID1AO14497 2285 aa15.65■□□□□ 0.1
SNAPC3-205ENST00000467062 ETV2O00321 342 aaPredicted RBP15.65■□□□□ 0.1
SNAPC3-205ENST00000467062 SDCBPO00560 298 aaPredicted RBP15.65■□□□□ 0.1
SNAPC3-205ENST00000467062 IDH3GP51553 393 aaPredicted RBP15.65■□□□□ 0.1
SNAPC3-205ENST00000467062 CSNK2A1P68400 391 aaPredicted RBP15.65■□□□□ 0.1
SNAPC3-205ENST00000467062 ETFRF1Q6IPR1 90 aa15.65■□□□□ 0.1
SNAPC3-205ENST00000467062 CSNK2A3Q8NEV1 391 aa15.65■□□□□ 0.1
SNAPC3-205ENST00000467062 TMEM170AQ8WVE7 144 aa15.65■□□□□ 0.1
SNAPC3-205ENST00000467062 EXTL1Q92935 676 aa15.65■□□□□ 0.1
SNAPC3-205ENST00000467062 ABHD14AQ9BUJ0 271 aa15.65■□□□□ 0.1
SNAPC3-205ENST00000467062 BANF2Q9H503 90 aa15.65■□□□□ 0.1
SNAPC3-205ENST00000467062 GPR84Q9NQS5 396 aa15.65■□□□□ 0.1
SNAPC3-205ENST00000467062 HSF4Q9ULV5 492 aa15.65■□□□□ 0.1
SNAPC3-205ENST00000467062 TRAF3IP2O43734 574 aaPredicted RBP15.64■□□□□ 0.09
SNAPC3-205ENST00000467062 PDGFBP01127 241 aaPredicted RBP15.64■□□□□ 0.09
SNAPC3-205ENST00000467062 ATP6V0CP27449 155 aa15.64■□□□□ 0.09
SNAPC3-205ENST00000467062 CSNK1A1P48729 337 aa15.64■□□□□ 0.09
SNAPC3-205ENST00000467062 ARFRP1Q13795 201 aa15.64■□□□□ 0.09
SNAPC3-205ENST00000467062 SULF2Q8IWU5 870 aa15.64■□□□□ 0.09
SNAPC3-205ENST00000467062 C11orf42Q8N5U0 333 aa15.64■□□□□ 0.09
SNAPC3-205ENST00000467062 OR2M3Q8NG83 312 aa15.64■□□□□ 0.09
SNAPC3-205ENST00000467062 OR5D18Q8NGL1 313 aa15.64■□□□□ 0.09
SNAPC3-205ENST00000467062 PRDM6Q9NQX0 595 aa15.64■□□□□ 0.09
SNAPC3-205ENST00000467062 EML6Q6ZMW3 1958 aa15.64■□□□□ 0.09
SNAPC3-205ENST00000467062 C20orf202A1L168 122 aa15.64■□□□□ 0.09
SNAPC3-205ENST00000467062 XRCC2O43543 280 aa15.64■□□□□ 0.09
SNAPC3-205ENST00000467062 CCL4P13236 92 aa15.64■□□□□ 0.09
SNAPC3-205ENST00000467062 ZNF43P17038 809 aa15.64■□□□□ 0.09
SNAPC3-205ENST00000467062 ZNF121P58317 390 aaPredicted RBP15.64■□□□□ 0.09
SNAPC3-205ENST00000467062 SP5Q6BEB4 398 aaPredicted RBP15.64■□□□□ 0.09
SNAPC3-205ENST00000467062 NUFIP2Q7Z417 695 aaKnown RBP15.64■□□□□ 0.09
SNAPC3-205ENST00000467062 ZNF100Q8IYN0 542 aa15.64■□□□□ 0.09
SNAPC3-205ENST00000467062 OR14L1PQ8NHC6 308 aa15.64■□□□□ 0.09
SNAPC3-205ENST00000467062 MAFAQ8NHW3 353 aaPredicted RBP15.64■□□□□ 0.09
SNAPC3-205ENST00000467062 SPACA9Q96E40 222 aaPredicted RBP15.64■□□□□ 0.09
SNAPC3-205ENST00000467062 PYGO2Q9BRQ0 406 aa15.64■□□□□ 0.09
SNAPC3-205ENST00000467062 LPAR5Q9H1C0 372 aa15.64■□□□□ 0.09
SNAPC3-205ENST00000467062 A8MXE2 369 aa15.63■□□□□ 0.09
SNAPC3-205ENST00000467062 IGHG1P01857 330 aa15.63■□□□□ 0.09
SNAPC3-205ENST00000467062 LCATP04180 440 aa15.63■□□□□ 0.09
SNAPC3-205ENST00000467062 RAB11AP62491 216 aa15.63■□□□□ 0.09
SNAPC3-205ENST00000467062 PLAC9Q5JTB6 97 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms